-
1
-
-
56449092797
-
The organisation of proton motive and non-proton motive redox loops in prokaryotic respiratory systems
-
Simon, J., van Spanning, R.J.M. and Richardson, D.J. (2008) The organisation of proton motive and non-proton motive redox loops in prokaryotic respiratory systems. Biochim. Biophys. Acta 1777, 1480-1490
-
(2008)
Biochim. Biophys. Acta
, vol.1777
, pp. 1480-1490
-
-
Simon, J.1
Van Spanning, R.J.M.2
Richardson, D.J.3
-
2
-
-
83255192314
-
Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions
-
Pinchuk, G.E., Geydebrekht, O.V., Hill, E.A., Reed, J.L., Konopka, A.E., Beliaev, A.S. and Fredrickson, J.K. (2011) Pyruvate and lactate metabolism by Shewanella oneidensis MR-1 under fermentation, oxygen limitation, and fumarate respiration conditions. Appl. Environ. Microbiol. 77, 8234-8240
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 8234-8240
-
-
Pinchuk, G.E.1
Geydebrekht, O.V.2
Hill, E.A.3
Reed, J.L.4
Konopka, A.E.5
Beliaev, A.S.6
Fredrickson, J.K.7
-
3
-
-
77955495197
-
Constraint-based model of Shewanella oneidensis MR-1 metabolism: A tool for data analysis and hypothesis generation
-
Pinchuk, G.E., Hill, E.A., Geydebrekht, O.V., De Ingeniis, J., Zhang, X.L., Osterman, A., Scott, J.H., Reed, S.B., Romine, M.F., Konopka, A.E. et al. (2010) Constraint-based model of Shewanella oneidensis MR-1 metabolism: a tool for data analysis and hypothesis generation. PLoS Comput. Biol. 6, e1000822
-
(2010)
PLoS Comput. Biol.
, vol.6
-
-
Pinchuk, G.E.1
Hill, E.A.2
Geydebrekht, O.V.3
De Ingeniis, J.4
Zhang, X.L.5
Osterman, A.6
Scott, J.H.7
Reed, S.B.8
Romine, M.F.9
Konopka, A.E.10
-
4
-
-
26444521691
-
Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors
-
DOI 10.1128/JB.187.20.7138-7145.2005
-
Beliaev, A.S., Klingeman, D.M., Klappenbach, J.A., Wu, L., Romine, M.F., Tiedje, J.A., Nealson, K.H., Fredrickson, J.K. and Zhou, J. (2005) Global transcriptome analysis of Shewanella oneidensis MR-1 exposed to different terminal electron acceptors. J. Bacteriol. 187, 7138-7145 (Pubitemid 41428890)
-
(2005)
Journal of Bacteriology
, vol.187
, Issue.20
, pp. 7138-7145
-
-
Beliaev, A.S.1
Klingeman, D.M.2
Klappenbach, J.A.3
Wu, L.4
Romine, M.F.5
Tiedje, J.M.6
Nealson, K.H.7
Fredrickson, J.K.8
Zhou, J.9
-
5
-
-
84862202398
-
A functional description of CymA, an electron-transfer hub supporting anaerobic respiratory flexibility in Shewanella
-
Marritt, S.J., Lowe, T.G., Bye, J., McMillan, D.G.G., Shi, L., Fredrickson, J., Zachara, J., Richardson, D.J., Cheesman, M.R., Jeuken, L.J.C. and Butt, J.N. (2012) A functional description of CymA, an electron-transfer hub supporting anaerobic respiratory flexibility in Shewanella. Biochem. J. 444, 465-474
-
(2012)
Biochem. J.
, vol.444
, pp. 465-474
-
-
Marritt, S.J.1
Lowe, T.G.2
Bye, J.3
McMillan, D.G.G.4
Shi, L.5
Fredrickson, J.6
Zachara, J.7
Richardson, D.J.8
Cheesman, M.R.9
Jeuken, L.J.C.10
Butt, J.N.11
-
6
-
-
84859951809
-
Menaquinone-7 is specific cofactor in tetraheme quinol dehydrogenase CymA
-
McMillan, D.G.G., Marritt, S.J., Butt, J.N. and Jeuken, L.J.C. (2012) Menaquinone-7 is specific cofactor in tetraheme quinol dehydrogenase CymA. J. Biol. Chem. 287, 14215-14225
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 14215-14225
-
-
McMillan, D.G.G.1
Marritt, S.J.2
Butt, J.N.3
Jeuken, L.J.C.4
-
7
-
-
80052714737
-
Investigation of the electron transport chain to and the catalytic activity of the diheme cytochrome c peroxidase CcpA of Shewanella oneidensis
-
Schutz, B., Seidel, J., Sturm, G., Einsle, O. and Gescher, J. (2011) Investigation of the electron transport chain to and the catalytic activity of the diheme cytochrome c peroxidase CcpA of Shewanella oneidensis. Appl. Environ. Microbiol. 77, 6172-6180
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 6172-6180
-
-
Schutz, B.1
Seidel, J.2
Sturm, G.3
Einsle, O.4
Gescher, J.5
-
8
-
-
0031054309
-
Cloning and sequence of cymA, a gene encoding a tetraheme cytochrome c required for reduction of iron(III), fumarate, and nitrate by Shewanella putrefaciens MR-1
-
Myers, C.R. and Myers, J.M. (1997) Cloning and sequence of cymA, a gene encoding a tetraheme cytochrome c required for reduction of iron(III), fumarate, and nitrate by Shewanella putrefaciens MR-1. J. Bacteriol. 179, 1143-1152 (Pubitemid 27076577)
-
(1997)
Journal of Bacteriology
, vol.179
, Issue.4
, pp. 1143-1152
-
-
Myers, C.R.1
Myers, J.M.2
-
9
-
-
0033989646
-
Role of the tetraheme cytochrome CymA in anaerobic electron transport in cells of Shewanella putrefaciens MR-1 with normal levels of menaquinone
-
Myers, J.M. and Myers, C.R. (2000) Role of the tetraheme cytochrome CymA in anaerobic electron transport in cells of Shewanella putrefaciens MR-1 with normal levels of menaquinone. J. Bacteriol. 182, 67-75 (Pubitemid 30004559)
-
(2000)
Journal of Bacteriology
, vol.182
, Issue.1
, pp. 67-75
-
-
Myers, J.M.1
Myers, C.R.2
-
10
-
-
0042572520
-
The tetraheme cytochrome CymA is required for anaerobic respiration with dimethyl sulfoxide and nitrite in Shewanella oneidensis
-
DOI 10.1021/bi034456f
-
Schwalb, C., Chapman, S.K. and Reid, G.A. (2003) The tetraheme cytochrome CymA is required for anaerobic respiration with dimethyl sulfoxide and nitrite in Shewanella oneidensis. Biochemistry 42, 9491-9497 (Pubitemid 36959257)
-
(2003)
Biochemistry
, vol.42
, Issue.31
, pp. 9491-9497
-
-
Schwalb, C.1
Chapman, S.K.2
Reid, G.A.3
-
11
-
-
68649102262
-
Reduction of nitrate in Shewanella oneidensis depends on atypical NAP and NRF systems with NapB as a preferred electron transport protein from CymA to NapA
-
Gao, H.C., Yang, Z.K., Barua, S., Reed, S.B., Romine, M.F., Nealson, K.H., Fredrickson, J.K., Tiedje, J.M. and Zhou, J.Z. (2009) Reduction of nitrate in Shewanella oneidensis depends on atypical NAP and NRF systems with NapB as a preferred electron transport protein from CymA to NapA. ISME J. 3, 966-976
-
(2009)
ISME J.
, vol.3
, pp. 966-976
-
-
Gao, H.C.1
Yang, Z.K.2
Barua, S.3
Reed, S.B.4
Romine, M.F.5
Nealson, K.H.6
Fredrickson, J.K.7
Tiedje, J.M.8
Zhou, J.Z.9
-
12
-
-
23744478281
-
Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms
-
DOI 10.1128/AEM.71.8.4414-4426.2005
-
Lies, D.P., Hernandez, M.E., Kappler, A., Mielke, R.E., Gralnick, J.A. and Newman, D.K. (2005) Shewanella oneidensis MR-1 uses overlapping pathways for iron reduction at a distance and by direct contact under conditions relevant for biofilms. Appl. Environ. Microbiol. 71, 4414-4426 (Pubitemid 41129495)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.8
, pp. 4414-4426
-
-
Lies, D.P.1
Hernandez, M.E.2
Kappler, A.3
Mielke, R.E.4
Gralnick, J.A.5
Newman, D.K.6
-
13
-
-
0025018122
-
Respiration-linked proton translocation couples to anaerobic reduction of manganese(IV) and iron(III) in Shewanella putrefaciens MR-1
-
Myers, C.R. and Nealson, K.H. (1990) Respiration-linked proton translocation coupled to anaerobic reduction of manganese(IV) and iron(III) in Shewanella putrefaciens MR-1. J. Bacteriol. 172, 6232-6238 (Pubitemid 20372760)
-
(1990)
Journal of Bacteriology
, vol.172
, Issue.11
, pp. 6232-6238
-
-
Myers, C.R.1
Nealson, K.H.2
-
14
-
-
79953115195
-
Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1
-
Cruz-Garcia, C., Murray, A.E., Rodrigues, J.L.M., Gralnick, J.A., McCue, L.A., Romine, M.F., Loffler, F.E. and Tiedje, J.M. (2011) Fnr (EtrA) acts as a fine-tuning regulator of anaerobic metabolism in Shewanella oneidensis MR-1. BMC Microbiol. 11, 64
-
(2011)
BMC Microbiol.
, vol.11
, pp. 64
-
-
Cruz-Garcia, C.1
Murray, A.E.2
Rodrigues, J.L.M.3
Gralnick, J.A.4
McCue, L.A.5
Romine, M.F.6
Loffler, F.E.7
Tiedje, J.M.8
-
15
-
-
0036331039
-
Microarray transcription profiling of a Shewanella oneidensis etrA mutant
-
DOI 10.1128/JB.184.16.4612-4616.2002
-
Beliaev, A.S., Thompson, D.K., Fields, M.W., Wu, L.Y., Lies, D.P., Nealson, K.H. and Zhou, J.Z. (2002) Microarray transcription profiling of a Shewanella oneidensis etrA mutant. J. Bacteriol. 184, 4612-4616 (Pubitemid 34832589)
-
(2002)
Journal of Bacteriology
, vol.184
, Issue.16
, pp. 4612-4616
-
-
Beliaev, A.S.1
Thompson, D.K.2
Fields, M.W.3
Wu, L.4
Lies, D.P.5
Nealson, K.H.6
Zhou, J.7
-
16
-
-
79960087302
-
Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth
-
Sundararajan, A., Kurowski, J., Yan, T., Klingeman, D.M., Joachimiak, M.P., Zhou, J., Naranjo, B., Gralnick, J.A. and Fields, M.W. (2011) Shewanella oneidensis MR-1 sensory box protein involved in aerobic and anoxic growth. Appl. Environ. Microbiol. 77, 4647-4656
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 4647-4656
-
-
Sundararajan, A.1
Kurowski, J.2
Yan, T.3
Klingeman, D.M.4
Joachimiak, M.P.5
Zhou, J.6
Naranjo, B.7
Gralnick, J.A.8
Fields, M.W.9
-
17
-
-
0034900650
-
Isolation and characterization of a Shewanella putrefaciens MR-1 electron transport regulator etrA mutant: Reassessment of the role of EtrA
-
DOI 10.1128/JB.183.16.4918-4926.2001
-
Maier, T.M. and Myers, C.R. (2001) Isolation and characterization of a Shewanella putrefaciens MR-1 electron transport regulator etrA mutant: reassessment of the role of EtrA. J. Bacteriol. 183, 4918-4926 (Pubitemid 32717247)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.16
, pp. 4918-4926
-
-
Maier, T.M.1
Myers, C.R.2
-
18
-
-
79956023775
-
The relationship between redox enzyme activity and electrochemical potential: Cellular and mechanistic implications from protein film electrochemistry
-
Gates, A.J., Kemp, G.L., To, C.Y., Mann, J., Marritt, S.J., Mayes, A.G., Richardson, D.J. and Butt, J.N. (2011) The relationship between redox enzyme activity and electrochemical potential: cellular and mechanistic implications from protein film electrochemistry. Phys. Chem. Chem. Phys. 13, 7720-7731
-
(2011)
Phys. Chem. Chem. Phys.
, vol.13
, pp. 7720-7731
-
-
Gates, A.J.1
Kemp, G.L.2
To, C.Y.3
Mann, J.4
Marritt, S.J.5
Mayes, A.G.6
Richardson, D.J.7
Butt, J.N.8
-
19
-
-
0027438193
-
Role of menaquinone in the reduction of fumarate, nitrate, iron(III) and manganese (IV) by Shewanella putrefaciens MR-1
-
DOI 10.1016/0378-1097(93)90522-4
-
Myers, C.R. and Myers, J.M. (1993) Role of menaquinone in the reduction of fumarate, nitrate, nitrite, iron(III) and manganese(IV) by Shewanella putrefaciens MR-1. FEMS Microbiol. Lett. 114, 215-222 (Pubitemid 23347769)
-
(1993)
FEMS Microbiology Letters
, vol.114
, Issue.2
, pp. 215-222
-
-
Myers, C.R.1
Myers, J.M.2
-
20
-
-
73249114332
-
Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1
-
Schuetz, B., Schicklberger, M., Kuermann, J., Spormann, A.M. and Gescher, J. (2009) Periplasmic electron transfer via the c-type cytochromes MtrA and FccA of Shewanella oneidensis MR-1. Appl. Environ. Microbiol. 75, 7789-7796
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 7789-7796
-
-
Schuetz, B.1
Schicklberger, M.2
Kuermann, J.3
Spormann, A.M.4
Gescher, J.5
-
21
-
-
79953797707
-
Tools for resolving complexity in the electron transfer networks of multiheme cytochromes c
-
Firer-Sherwood, M.A., Bewley, K.D., Mock, J.-Y. and Elliott, S.J. (2011) Tools for resolving complexity in the electron transfer networks of multiheme cytochromes c. Metallomics 3, 344-348
-
(2011)
Metallomics
, vol.3
, pp. 344-348
-
-
Firer-Sherwood, M.A.1
Bewley, K.D.2
Mock, J.-Y.3
Elliott, S.J.4
-
22
-
-
79551652545
-
Towards electrosynthesis in Shewanella: Energetics of reversing the Mtr pathway for reductive metabolism
-
Ross, D.E., Flynn, J.M., Baron, D.B., Gralnick, J.A. and Bond, D.R. (2011) Towards electrosynthesis in Shewanella: energetics of reversing the Mtr pathway for reductive metabolism. PLoS ONE 6, e16649
-
(2011)
PLoS ONE
, vol.6
-
-
Ross, D.E.1
Flynn, J.M.2
Baron, D.B.3
Gralnick, J.A.4
Bond, D.R.5
-
23
-
-
34547109382
-
An octaheme c-type cytochrome from Shewanella oneidensis can reduce nitrite and hydroxylamine
-
DOI 10.1016/j.febslet.2007.07.005, PII S0014579307007491
-
Atkinson, S.J., Mowat, C.G., Reid, G.A. and Chapman, S.K. (2007) An octaheme c-type cytochrome from Shewanella oneidensis can reduce nitrite and hydroxylamine. FEBS Lett. 581, 3805-3808 (Pubitemid 47102310)
-
(2007)
FEBS Letters
, vol.581
, Issue.20
, pp. 3805-3808
-
-
Atkinson, S.J.1
Mowat, C.G.2
Reid, G.A.3
Chapman, S.K.4
-
24
-
-
0032573575
-
Molecular analysis of the trimethylamine N-oxide (TMAO) reductase respiratory system from a Shewanella species
-
DOI 10.1006/jmbi.1998.2155
-
Dos Santos, J.P., Iobbi-Nivol, C., Couillault, C., Giordano, G. and Mejean, V. (1998) Molecular analysis of the trimethylamine N-oxide (TMAO) reductase respiratory system from a Shewanella species. J. Mol. Biol. 284, 421-433 (Pubitemid 28542463)
-
(1998)
Journal of Molecular Biology
, vol.284
, Issue.2
, pp. 421-433
-
-
Dos, S.J.-P.1
Iobbi-Nivol, C.2
Couillault, C.3
Giordano, G.4
Mejean, V.5
-
25
-
-
0037336127
-
Effects of ISSo2 insertions in structural and regulatory genes of the trimethylamine oxide reductase of Shewanella oneidensis
-
DOI 10.1128/JB.185.6.2042-2045.2003
-
Bordi, C., Iobbi-Nivol, C., Mejean, V. and Patte, J.C. (2003) Effects of ISSo2 insertions in structural and regulatory genes of the trimethylamine oxide reductase of Shewanella oneidensis. J. Bacteriol. 185, 2042-2045 (Pubitemid 36297908)
-
(2003)
Journal of Bacteriology
, vol.185
, Issue.6
, pp. 2042-2045
-
-
Bordi, C.1
Iobbi-Nivol, C.2
Mejean, V.3
Patte, J.-C.4
-
26
-
-
33645224039
-
Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1
-
Gralnick, J.A., Vali, H., Lies, D.P. and Newman, D.K. (2006) Extracellular respiration of dimethyl sulfoxide by Shewanella oneidensis strain MR-1. Proc. Natl. Acad. Sci. U.S.A. 103, 4669-4674
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 4669-4674
-
-
Gralnick, J.A.1
Vali, H.2
Lies, D.P.3
Newman, D.K.4
-
27
-
-
34250639301
-
Respiration of metal (hydr)oxides by Shewanella and Geobacter: A key role for multihaem c-type cytochromes
-
DOI 10.1111/j.1365-2958.2007.05783.x
-
Shi, L., Squier, T.C., Zachara, J.M. and Fredrickson, J.K. (2007) Respiration of metal (hydr)oxides by Shewanella and Geobacter: a key role for multihaem c-type cytochromes. Mol. Microbiol. 65, 12-20 (Pubitemid 46934494)
-
(2007)
Molecular Microbiology
, vol.65
, Issue.1
, pp. 12-20
-
-
Shi, L.1
Squier, T.C.2
Zachara, J.M.3
Fredrickson, J.K.4
-
28
-
-
0041344634
-
Characterization of the Shewanella oneidensis MR-1 decaheme cytochrome MtrA
-
Pitts, K.E., Dobbin, P.S., Reyes-Ramirez, F., Thomson, A.J., Richardson, D.J. and Seward, H.E. (2003) Characterization of the Shewanella oneidensis MR-1 decaheme cytochrome MtrA. J. Biol. Chem. 278, 27758-27765
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 27758-27765
-
-
Pitts, K.E.1
Dobbin, P.S.2
Reyes-Ramirez, F.3
Thomson, A.J.4
Richardson, D.J.5
Seward, H.E.6
-
29
-
-
41749120309
-
Dissimilatory iron reduction in Escherichia coli: Identification of CymA of Shewanella oneidensis and NapC of E. coli as ferric reductases
-
DOI 10.1111/j.1365-2958.2008.06183.x
-
Gescher, J.S., Cordova, C.D. and Spormann, A.M. (2008) Dissimilatory iron reduction in Escherichia coli: identification of CymA of Shewanella oneidensis and NapC of E. coli as ferric reductases. Mol. Microbiol. 68, 706-719 (Pubitemid 351490189)
-
(2008)
Molecular Microbiology
, vol.68
, Issue.3
, pp. 706-719
-
-
Gescher, J.S.1
Cordova, C.D.2
Spormann, A.M.3
-
30
-
-
68549130741
-
Anaerobic respiration of elemental sulfur and thiosulfate by Shewanella oneidensis MR-1 requires psrA, a homolog of the phsA gene of Salmonella enterica serovar Typhimurium LT2
-
Burns, J.L. and DiChristina, T.J. (2009) Anaerobic respiration of elemental sulfur and thiosulfate by Shewanella oneidensis MR-1 requires psrA, a homolog of the phsA gene of Salmonella enterica serovar Typhimurium LT2. Appl. Environ. Microbiol. 75, 5209-5217
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 5209-5217
-
-
Burns, J.L.1
DiChristina, T.J.2
-
31
-
-
78650774942
-
The octahaem SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1
-
Shirodkar, S., Reed, S., Romine, M. and Saffarini, D. (2011) The octahaem SirA catalyses dissimilatory sulfite reduction in Shewanella oneidensis MR-1. Environ. Microbiol. 13, 108-115
-
(2011)
Environ. Microbiol.
, vol.13
, pp. 108-115
-
-
Shirodkar, S.1
Reed, S.2
Romine, M.3
Saffarini, D.4
-
32
-
-
0032947007
-
Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov
-
Venkateswaran, K., Moser, D.P., Dollhopf, M.E., Lies, D.P., Saffarini, D.A., MacGregor, B.J., Ringelberg, D.B., White, D.C., Nishijima, M., Sano, H. et al. (1999) Polyphasic taxonomy of the genus Shewanella and description of Shewanella oneidensis sp. nov. Int. J. Syst. Bacteriol. 49, 705-724
-
(1999)
Int. J. Syst. Bacteriol.
, vol.49
, pp. 705-724
-
-
Venkateswaran, K.1
Moser, D.P.2
Dollhopf, M.E.3
Lies, D.P.4
Saffarini, D.A.5
MacGregor, B.J.6
Ringelberg, D.B.7
White, D.C.8
Nishijima, M.9
Sano, H.10
-
33
-
-
0026493775
-
Isoprenoid quinone composition of some marine Alteromonas, Marinomonas, Deleya, Pseudomonas and Shewanella species
-
Akagawamatsushita, M., Itoh, T., Katayama, Y., Kuraishi, H. and Yamasato, K. (1992) Isoprenoid quinone composition of some marine Alteromonas, Marinomonas, Deleya, Pseudomonas and Shewanella species. J. Gen. Microbiol. 138, 2275-2281
-
(1992)
J. Gen. Microbiol.
, vol.138
, pp. 2275-2281
-
-
Akagawamatsushita, M.1
Itoh, T.2
Katayama, Y.3
Kuraishi, H.4
Yamasato, K.5
-
34
-
-
0021814739
-
Structure of methylmenaquinone-7 isolated from Alteromonas putrefaciens IAM 12079
-
DOI 10.1016/0304-4165(85)90161-8
-
Itoh, T., Funabashi, H., Katayamafujimura, Y., Iwasaki, S. and Kuraishi, H. (1985) Structure of methylmenaquinone-7 isolated from Alteromonas putrefaciens IAM 12079. Biochim. Biophys. Acta 840, 51-55 (Pubitemid 15042014)
-
(1985)
Biochimica et Biophysica Acta - General Subjects
, vol.840
, Issue.1
, pp. 51-55
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Itoh, T.1
Funabashi, H.2
Katayama-Fujimura, Y.3
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