The effect of strand bias in Illumina short-read sequencing data

BMC Genomics

Volumn 13, Issue 1, 2012, Pages

  Guo, Yan ^a   Li, Jiang ^a   Li, Chung I ^a   Long, Jirong ^b   Samuels, David C ^b   Shyr, Yu ^a  

^a VANDERBILT INGRAM CANCER CENTER   (United States)

^b VANDERBILT UNIVERSITY MEDICAL CENTER   (United States)

Author keywords

Illumina; Next Generation Sequencing; Short Read; SNP quality control; Strand Bias

Indexed keywords

ADULT; ANALYTICAL PARAMETERS; ARTICLE; BREAST CANCER; CHINA; CLINICAL ARTICLE; CONTROLLED STUDY; EARLY CANCER; EXOME; FEMALE; GENE FREQUENCY; GENE SEQUENCE; GENOTYPE; HETEROZYGOSITY; HIGH THROUGHPUT SEQUENCING; HOMOZYGOSITY; HUMAN; HUMAN TISSUE; INFORMATION PROCESSING DEVICE; POPULATION BASED CASE CONTROL STUDY; SEQUENCE ALIGNMENT; SINGLE NUCLEOTIDE POLYMORPHISM; STRAND BIAS; URBAN AREA;

BIAS (EPIDEMIOLOGY); BREAST NEOPLASMS; DNA; EXOME; FEMALE; GENOME, HUMAN; GENOTYPE; HIGH-THROUGHPUT NUCLEOTIDE SEQUENCING; HUMANS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; POLYMORPHISM, SINGLE NUCLEOTIDE; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA;

EID: 84869876659     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-13-666     Document Type: Article

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