메뉴 건너뛰기




Volumn 13, Issue 4, 2013, Pages 1093-1106

Measuring the spontaneous curvature of bilayer membranes by molecular dynamics simulations

Author keywords

Bilayer membrane; Helfrich free energy; Molecular dynamics simulation; Spontaneous curvature

Indexed keywords


EID: 84869784620     PISSN: 18152406     EISSN: 19917120     Source Type: Journal    
DOI: 10.4208/cicp.230411.230312a     Document Type: Article
Times cited : (9)

References (44)
  • 1
    • 84943997802 scopus 로고
    • Elastic properties of lipid bilayers: Theory and possible experiments
    • W. Helfrich. Elastic properties of lipid bilayers: theory and possible experiments. Z Naturforsch [C], 28(11):693-703, 1973.
    • (1973) Z Naturforsch [C] , vol.28 , Issue.11 , pp. 693-703
    • Helfrich, W.1
  • 2
    • 0038250193 scopus 로고    scopus 로고
    • On the relationship between the Cosserat and Kirchhoff-Love theories of elastic shells
    • D. J. Steigmann. On the relationship between the cosserat and kirchhoff-love theories of elastic shells. Mathematics and Mechanics of Solids, 4(3):275-288, 1999. (Pubitemid 129655776)
    • (1999) Mathematics and Mechanics of Solids , vol.4 , Issue.3 , pp. 275-288
    • Steigmann, D.J.1
  • 3
    • 0038095499 scopus 로고    scopus 로고
    • Deformations of the geometry of lipid vesicles
    • DOI 10.1088/0305-4470/36/23/301, PII S0305447003572535
    • R. Capovilla, J. Guven, and J. A. Santiago. Deformations of the geometry of lipid vesicles. Journal of Physics A: Mathematical and General, 36:6281-6295, 2003. (Pubitemid 37341759)
    • (2003) Journal of Physics A: Mathematical and General , vol.36 , Issue.23 , pp. 6281-6295
    • Capovilla, R.1    Guven, J.2    Santiago, J.A.3
  • 4
    • 34247639492 scopus 로고    scopus 로고
    • Continuum theory of a moving membrane
    • D. Hu, P. Zhang, and W. E. Continuum theory of a moving membrane. Physical Review E, 75(4):41605, 2007.
    • (2007) Physical Review E , vol.75 , Issue.4 , pp. 41605
    • Hu, D.1    Zhang, P.2
  • 5
    • 0001482698 scopus 로고
    • Frequency spectrum of the flicker phenomenon in erythrocytes
    • F. Brochard and J. F. Lennon. Frequency spectrum of the flicker phenomenon in erythrocytes. Journal de Physique, 36(11):1035-1047, 1975.
    • (1975) Journal de Physique , vol.36 , Issue.11 , pp. 1035-1047
    • Brochard, F.1    Lennon, J.F.2
  • 6
    • 0000866991 scopus 로고
    • Bending elasticity and thermal fluctuations of lipid membranes. theoretical and experimental requirements
    • J. F. Faucon, M. D. Mitov, P. Meleard, I. Bivas, and P. Bothorel. Bending elasticity and thermal fluctuations of lipid membranes. theoretical and experimental requirements. Journal de Physique, 50(17):2389-2414, 1989.
    • (1989) Journal de Physique , vol.50 , Issue.17 , pp. 2389-2414
    • Faucon, J.F.1    Mitov, M.D.2    Meleard, P.3    Bivas, I.4    Bothorel, P.5
  • 7
    • 11944258697 scopus 로고
    • Entropy-driven tension and bending elasticity in condensed-fluid membranes
    • E. Evans and W. Rawicz. Entropy-driven tension and bending elasticity in condensed-fluid membranes. Physical Review Letters, 64(17):2094-2097, 1990.
    • (1990) Physical Review Letters , vol.64 , Issue.17 , pp. 2094-2097
    • Evans, E.1    Rawicz, W.2
  • 8
    • 0033932837 scopus 로고    scopus 로고
    • Effect of chain length and unsaturation on elasticity of lipid bilayers
    • W. Rawicz, K. C. Olbrich, T. McIntosh, D. Needham, and E. Evans. Effect of chain length and unsaturation on elasticity of lipid bilayers. Biophysical Journal, 79(1):328-339, 2000. (Pubitemid 30436749)
    • (2000) Biophysical Journal , vol.79 , Issue.1 , pp. 328-339
    • Rawicz, W.1    Olbrich, K.C.2    McIntosh, T.3    Needham, D.4    Evans, E.5
  • 9
    • 22144456340 scopus 로고    scopus 로고
    • Coalescence of membrane tethers: Experiments, theory, and applications
    • DOI 10.1529/biophysj.104.056473
    • D. Cuvelier, I. Derényi, P. Bassereau, and P. Nassoy. Coalescence of membrane tethers: experiments, theory, and applications. Biophysical Journal, 88(4):2714-2726, 2005. (Pubitemid 40976138)
    • (2005) Biophysical Journal , vol.88 , Issue.4 , pp. 2714-2726
    • Cuvelier, D.1    Derenyi, I.2    Bassereau, P.3    Nassoy, P.4
  • 10
    • 29144473001 scopus 로고    scopus 로고
    • Solvent-free model for self-assembling fluid bilayer membranes: Stabilization of the fluid phase based on broad attractive tail potentials
    • I. R. Cooke and M. Deserno. Solvent-free model for self-assembling fluid bilayer membranes: Stabilization of the fluid phase based on broad attractive tail potentials. The Journal of Chemical Physics, 123:224710, 2005.
    • (2005) The Journal of Chemical Physics , vol.123 , pp. 224710
    • Cooke, I.R.1    Deserno, M.2
  • 11
    • 0000283071 scopus 로고    scopus 로고
    • Mobility and elasticity of self-assembled membranes
    • R. Goetz, G. Gompper, and R. Lipowsky. Mobility and elasticity of self-assembled membranes. Physical Review Letters, 82(1):221-224, 1999. (Pubitemid 129661990)
    • (1999) Physical Review Letters , vol.82 , Issue.1 , pp. 221-224
    • Goetz, R.1    Gompper, G.2    Lipowsky, R.3
  • 12
    • 33751577958 scopus 로고    scopus 로고
    • A novel method for measuring the bending rigidity of model lipid membranes by simulating tethers
    • V. A. Harmandaris and M. Deserno. A novel method for measuring the bending rigidity of model lipid membranes by simulating tethers. The Journal of Chemical Physics, 125:204905, 2006.
    • (2006) The Journal of Chemical Physics , vol.125 , pp. 204905
    • Harmandaris, V.A.1    Deserno, M.2
  • 13
    • 0033932839 scopus 로고    scopus 로고
    • Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations
    • E. Lindahl and O. Edholm. Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations. Biophysical Journal, 79(1):426-433, 2000. (Pubitemid 30436758)
    • (2000) Biophysical Journal , vol.79 , Issue.1 , pp. 426-433
    • Lindahl, E.1    Edholm, O.2
  • 14
    • 0035812110 scopus 로고    scopus 로고
    • Effect of undulations on surface tension in simulated bilayers
    • DOI 10.1021/jp0103474
    • S. J. Marrink and A. E. Mark. Effect of undulations on surface tension in simulated bilayers. Journal of Physical Chemistry B, 105(26):6122-6127, 2001. (Pubitemid 35339078)
    • (2001) Journal of Physical Chemistry B , vol.105 , Issue.26 , pp. 6122-6127
    • Marrink, S.J.1    Mark, A.E.2
  • 15
    • 28444476999 scopus 로고    scopus 로고
    • Membrane curvature and mechanisms of dynamic cell membrane remodelling
    • DOI 10.1038/nature04396
    • H. T. McMahon and J. L. Gallop. Membrane curvature and mechanisms of dynamic cell membrane remodelling. Nature, 438:590-596, 2005. (Pubitemid 41740562)
    • (2005) Nature , vol.438 , Issue.7068 , pp. 590-596
    • McMahon, H.T.1    Gallop, J.L.2
  • 16
    • 33644846421 scopus 로고    scopus 로고
    • How proteins produce cellular membrane curvature
    • DOI 10.1038/nrm1784, PII N1784
    • J. Zimmerberg and M. M. Kozlov. How proteins produce cellular membrane curvature. Nature Reviews Molecular Cell Biology, 7(1):9-19, 2005. (Pubitemid 43361568)
    • (2006) Nature Reviews Molecular Cell Biology , vol.7 , Issue.1 , pp. 9-19
    • Zimmerberg, J.1    Kozlov, M.M.2
  • 17
    • 64249110493 scopus 로고    scopus 로고
    • The bar domain superfamily: Membrane-molding macromolecules
    • A. Frost, V. M. Unger, and P. De Camilli. The bar domain superfamily: membrane-molding macromolecules. Cell, 137(2):191-196, 2009.
    • (2009) Cell , vol.137 , Issue.2 , pp. 191-196
    • Frost, A.1    Unger, V.M.2    De Camilli, P.3
  • 18
    • 75749095276 scopus 로고    scopus 로고
    • Biophysics: Joint effort bends membrane
    • M. M. Kozlov. Biophysics: Joint effort bends membrane. Nature, 463(7280):439, 2010.
    • (2010) Nature , vol.463 , Issue.7280 , pp. 439
    • Kozlov, M.M.1
  • 19
    • 33645770992 scopus 로고    scopus 로고
    • Effect of average phospholipid curvature on supported bilayer formation on glass by vesicle fusion
    • C. Hamai, T. Yang, S. Kataoka, P. S. Cremer, and S. M. Musser. Effect of average phospholipid curvature on supported bilayer formation on glass by vesicle fusion. Biophysical Journal, 90(4):1241-1248, 2006.
    • (2006) Biophysical Journal , vol.90 , Issue.4 , pp. 1241-1248
    • Hamai, C.1    Yang, T.2    Kataoka, S.3    Cremer, P.S.4    Musser, S.M.5
  • 20
    • 50349086997 scopus 로고    scopus 로고
    • Factors influencing local membrane curvature induction by n-bar domains as revealed by molecular dynamics simulations
    • P. D. Blood, R. D. Swenson, and G. A. Voth. Factors influencing local membrane curvature induction by n-bar domains as revealed by molecular dynamics simulations. Biophysical Journal, 95(4):1866-1876, 2008.
    • (2008) Biophysical Journal , vol.95 , Issue.4 , pp. 1866-1876
    • Blood, P.D.1    Swenson, R.D.2    Voth, G.A.3
  • 21
    • 46449135255 scopus 로고    scopus 로고
    • The hydrophobic insertion mechanism of membrane curvature generation by proteins
    • F. Campelo, H. T. McMahon, and M. M. Kozlov. The hydrophobic insertion mechanism of membrane curvature generation by proteins. Biophysical Journal, 95(5):2325-2339, 2008.
    • (2008) Biophysical Journal , vol.95 , Issue.5 , pp. 2325-2339
    • Campelo, F.1    McMahon, H.T.2    Kozlov, M.M.3
  • 22
    • 33750037303 scopus 로고    scopus 로고
    • Direct observation of bin/amphiphysin/rvs (bar) domaininduced membrane curvature by means of molecular dynamics simulations
    • P. D. Blood and G. A. Voth. Direct observation of bin/amphiphysin/rvs (bar) domaininduced membrane curvature by means of molecular dynamics simulations. Proceedings of the National Academy of Sciences, 103(41):15068, 2006.
    • (2006) Proceedings of the National Academy of Sciences , vol.103 , Issue.41 , pp. 15068
    • Blood, P.D.1    Voth, G.A.2
  • 23
    • 53249125167 scopus 로고    scopus 로고
    • Four-scale description of membrane sculpting by bar domains
    • A. Arkhipov, Y. Yin, and K. Schulten. Four-scale description of membrane sculpting by bar domains. Biophysical Journal, 95(6):2806-2821, 2008.
    • (2008) Biophysical Journal , vol.95 , Issue.6 , pp. 2806-2821
    • Arkhipov, A.1    Yin, Y.2    Schulten, K.3
  • 24
    • 72049092011 scopus 로고    scopus 로고
    • Membrane-bending mechanism of amphiphysin n-bar domains
    • A. Arkhipov, Y. Yin, and K. Schulten. Membrane-bending mechanism of amphiphysin n-bar domains. Biophysical Journal, 97(10):2727-2735, 2009.
    • (2009) Biophysical Journal , vol.97 , Issue.10 , pp. 2727-2735
    • Arkhipov, A.1    Yin, Y.2    Schulten, K.3
  • 25
  • 27
    • 0000647692 scopus 로고
    • Statistical mechanics of inhomogeneous fluids. Proceedings of the Royal Society of London. Series A
    • P. Schofield and J. R. Henderson. Statistical mechanics of inhomogeneous fluids. Proceedings of the Royal Society of London. Series A, Mathematical and Physical Sciences (1934-1990), 379(1776):231-246, 1982.
    • (1776) Mathematical and Physical Sciences (1934-1990) , vol.379 , pp. 231-246
    • Schofield, P.1    Henderson, J.R.2
  • 28
    • 0034622763 scopus 로고    scopus 로고
    • Molecular dynamics results on the pressure tensor of polymer films
    • F. Varnik, J. Baschnagel, and K. Binder. Molecular dynamics results on the pressure tensor of polymer films. The Journal of Chemical Physics, 113:4444, 2000.
    • (2000) The Journal of Chemical Physics , vol.113 , pp. 4444
    • Varnik, F.1    Baschnagel, J.2    Binder, K.3
  • 31
    • 0025105212 scopus 로고
    • Membrane curvature, lipid segregation, and structural transitions for phospholipids under dual-solvent stress
    • DOI 10.1021/bi00453a010
    • R. P. Rand, N. L. Fuller, S. M. Gruner, and V. A. Parsegian. Membrane curvature, lipid segregation, and structural transitions for phospholipids under dual-solvent stress. Biochemistry, 29(1):76-87, 1990. (Pubitemid 20033709)
    • (1990) Biochemistry , vol.29 , Issue.1 , pp. 76-87
    • Rand, R.P.1    Fuller, N.L.2    Gruner, S.M.3    Parsegian, V.A.4
  • 32
    • 0029914157 scopus 로고    scopus 로고
    • Measured effects of diacylglycerol on structural and elastic properties of phospholipid membranes
    • S. Leikin, M. M. Kozlov, N. L. Fuller, and R. P. Rand. Measured effects of diacylglycerol on structural and elastic properties of phospholipid membranes. Biophysical Journal, 71(5):2623-2632, 1996. (Pubitemid 26367725)
    • (1996) Biophysical Journal , vol.71 , Issue.5 , pp. 2623-2632
    • Leikin, S.1    Kozlov, M.M.2    Fuller, N.L.3    Rand, R.P.4
  • 33
    • 0034951046 scopus 로고    scopus 로고
    • The influence of lysolipids on the spontaneous curvature and bending elasticity of phospholipid membranes
    • N. Fuller and R. P. Rand. The influence of lysolipids on the spontaneous curvature and bending elasticity of phospholipid membranes. Biophysical Journal, 81(1):243-254, 2001. (Pubitemid 32605966)
    • (2001) Biophysical Journal , vol.81 , Issue.1 , pp. 243-254
    • Fuller, N.1    Rand, R.P.2
  • 35
    • 33750406161 scopus 로고
    • Theory of self-assembly of hydrocarbon amphiphiles into micelles and bilayers
    • Faraday Transactions 2
    • J. N. Israelachvili, D. J. Mitchell, and B. W. Ninham. Theory of self-assembly of hydrocarbon amphiphiles into micelles and bilayers. Journal of the Chemical Society, Faraday Transactions 2, 72:1525-1568, 1976.
    • (1976) Journal of the Chemical Society , vol.72 , pp. 1525-1568
    • Israelachvili, J.N.1    Mitchell, D.J.2    Ninham, B.W.3
  • 37
    • 0029927812 scopus 로고    scopus 로고
    • Intrinsic curvature in normal and inverted lipid structures and in membranes
    • D. Marsh. Intrinsic curvature in normal and inverted lipid structures and in membranes. Biophysical Journal, 70(5):2248-2255, 1996. (Pubitemid 26133717)
    • (1996) Biophysical Journal , vol.70 , Issue.5 , pp. 2248-2255
    • Marsh, D.1
  • 38
    • 33745700351 scopus 로고    scopus 로고
    • Coupling between lipid shape and membrane curvature
    • I. R. Cooke and M. Deserno. Coupling between lipid shape and membrane curvature. Biophysical Journal, 91(2):487, 2006.
    • (2006) Biophysical Journal , vol.91 , Issue.2 , pp. 487
    • Cooke, I.R.1    Deserno, M.2
  • 39
    • 27244452976 scopus 로고    scopus 로고
    • Tunable generic model for fluid bilayer membranes
    • I. R. Cooke, K. Kremer, and M. Deserno. Tunable generic model for fluid bilayer membranes. Physical Review E, 72(1):11506, 2005.
    • (2005) Physical Review E , vol.72 , Issue.1 , pp. 11506
    • Cooke, I.R.1    Kremer, K.2    Deserno, M.3
  • 41
    • 77949269266 scopus 로고    scopus 로고
    • Membrane composition-mediated protein-protein interactions
    • B. J. Reynwar and M. Deserno. Membrane composition-mediated protein-protein interactions. Biointerphases, 3: FA117-FA124, 2008.
    • (2008) Biointerphases , vol.3
    • Reynwar, B.J.1    Deserno, M.2
  • 42
    • 77953056708 scopus 로고    scopus 로고
    • An implicit solvent coarse-grained lipid model with correct stress profile
    • A. J. Sodt and T. Head-Gordon. An implicit solvent coarse-grained lipid model with correct stress profile. The Journal of Chemical Physics, 132:205103, 2010.
    • (2010) The Journal of Chemical Physics , vol.132 , pp. 205103
    • Sodt, A.J.1    Head-Gordon, T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.