메뉴 건너뛰기




Volumn 79, Issue 1, 2000, Pages 426-433

Mesoscopic undulations and thickness fluctuations in lipid bilayers from molecular dynamics simulations

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; FORCE; LIPID BILAYER; MEMBRANE; MOLECULAR DYNAMICS; SIMULATION; THEORY;

EID: 0033932839     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(00)76304-1     Document Type: Article
Times cited : (541)

References (34)
  • 3
    • 0029633168 scopus 로고
    • GROMACS: A message-passing parallel molecular dynamics implementation
    • Berendsen, H. J. C., D. van der Spoel, and R. van Drunen. 1995. GROMACS: a message-passing parallel molecular dynamics implementation. Comp. Phys. Comm. 91:43-56.
    • (1995) Comp. Phys. Comm. , vol.91 , pp. 43-56
    • Berendsen, H.J.C.1    Van Der Spoel, D.2    Van Drunen, R.3
  • 4
    • 0030999097 scopus 로고    scopus 로고
    • Molecular dynamics simulation of a fluid bilayer of dipalmitoylphosphalidylcholine at dull hydration, constant pressure and constant temperature
    • Berger, O., O. Edholm, and F. Jähnig. 1997. Molecular dynamics simulation of a fluid bilayer of dipalmitoylphosphalidylcholine at dull hydration, constant pressure and constant temperature Biophys. J. 72: 2002-2013.
    • (1997) Biophys. J. , vol.72 , pp. 2002-2013
    • Berger, O.1    Edholm, O.2    Jähnig, F.3
  • 5
    • 0025993884 scopus 로고
    • Physical properties of the fluid lipid-bilayer component of cell membranes: A perspective
    • Bloom, M., E. Evans, and O. G. Mouritsen. 1991. Physical properties of the fluid lipid-bilayer component of cell membranes: a perspective. Quart. Rev. Biophys. 24:293-397.
    • (1991) Quart. Rev. Biophys. , vol.24 , pp. 293-397
    • Bloom, M.1    Evans, E.2    Mouritsen, O.G.3
  • 6
    • 0023052472 scopus 로고
    • Structural changes in lipid bilayers and biological membranes caused by hydrostatic pressure
    • Braganza, L. F., and D. L. Worcester. 1986. Structural changes in lipid bilayers and biological membranes caused by hydrostatic pressure. Biochemistry. 25:7484-7488.
    • (1986) Biochemistry , vol.25 , pp. 7484-7488
    • Braganza, L.F.1    Worcester, D.L.2
  • 7
    • 0029099308 scopus 로고
    • Incorporation of surface tension into molecular dynamics simulation of an interface: A fluid phase lipid bilayer membrane
    • Chiu, S., M. Clark, V. Balaji, S. Subramaniam, H. Scott, and E. Jakobsson. 1995. Incorporation of surface tension into molecular dynamics simulation of an interface: a fluid phase lipid bilayer membrane. Biophys. J. 69:1230-1245.
    • (1995) Biophys. J. , vol.69 , pp. 1230-1245
    • Chiu, S.1    Clark, M.2    Balaji, V.3    Subramaniam, S.4    Scott, H.5    Jakobsson, E.6
  • 8
    • 0344405161 scopus 로고
    • Bending elasticity and thermal excitations of lipid bilayer vesicles: Modulation by solutes
    • Duwe, H. P., and E. Sackmann. 1990. Bending elasticity and thermal excitations of lipid bilayer vesicles: modulation by solutes. Physica A. 163:410-428.
    • (1990) Physica A , vol.163 , pp. 410-428
    • Duwe, H.P.1    Sackmann, E.2
  • 9
    • 0012627630 scopus 로고
    • Molecular dynamics simulation of a smectic liquid crystal with atomic detail
    • Egberts, E., and H. J. C. Berendsen. 1988. Molecular dynamics simulation of a smectic liquid crystal with atomic detail. J. Chem. Phys. 98: 1712-1720.
    • (1988) J. Chem. Phys. , vol.98 , pp. 1712-1720
    • Egberts, E.1    Berendsen, H.J.C.2
  • 10
    • 0026224081 scopus 로고
    • Entropy-driven tension in vesicle membranes and unbinding of adherent vesicles
    • Evans, E. 1991. Entropy-driven tension in vesicle membranes and unbinding of adherent vesicles. Langmuir. 7:1900-1908.
    • (1991) Langmuir , vol.7 , pp. 1900-1908
    • Evans, E.1
  • 11
    • 11944258697 scopus 로고
    • Entropy driven tension and bending elasticity in condensed-fluid membranes
    • Evans, E., and W. Rawicz. 1990. Entropy driven tension and bending elasticity in condensed-fluid membranes. Phys. Rev. Lett. 64: 2094-2097.
    • (1990) Phys. Rev. Lett. , vol.64 , pp. 2094-2097
    • Evans, E.1    Rawicz, W.2
  • 12
    • 0029767694 scopus 로고    scopus 로고
    • On simulating lipid bilayers with and applied surface tension: Periodic boundary conditions and undulations
    • Feller, S. E., and R. W. Pastor. 1996. On simulating lipid bilayers with and applied surface tension: periodic boundary conditions and undulations. Biophys. J. 71:1350-1355.
    • (1996) Biophys. J. , vol.71 , pp. 1350-1355
    • Feller, S.E.1    Pastor, R.W.2
  • 13
    • 0032614136 scopus 로고    scopus 로고
    • Constant surface tension simulations of lipid bilayers: The sensitivity of surface areas and compressibilities
    • Feller, S. E., and R. W. Pastor. 1999. Constant surface tension simulations of lipid bilayers: the sensitivity of surface areas and compressibilities J. Chem. Phys. 111:1281-1287.
    • (1999) J. Chem. Phys. , vol.111 , pp. 1281-1287
    • Feller, S.E.1    Pastor, R.W.2
  • 14
    • 0031268384 scopus 로고    scopus 로고
    • Computer simulation of a DPPC phospholipid bilayer: Structural changes as a function of molecular surface area
    • Feller, S. E., R. M. Venable, and R. W. Pastor. 1997. Computer simulation of a DPPC phospholipid bilayer: structural changes as a function of molecular surface area. Langmuir. 13:6555-6561.
    • (1997) Langmuir , vol.13 , pp. 6555-6561
    • Feller, S.E.1    Venable, R.M.2    Pastor, R.W.3
  • 16
    • 0000283071 scopus 로고    scopus 로고
    • Mobility and elasticity of self-assembled membranes
    • Goetz, R., G. Gompper, and R. Lipowsky. 1999. Mobility and elasticity of self-assembled membranes. Phys. Rev. Lett. 82:221-224.
    • (1999) Phys. Rev. Lett. , vol.82 , pp. 221-224
    • Goetz, R.1    Gompper, G.2    Lipowsky, R.3
  • 17
    • 0000388705 scopus 로고    scopus 로고
    • LINCS: A linear constraint solver for molecular simulations
    • Hess, B., H. Bekker, H. J. C. Berendsen, and J. G. E. M. Fraaije. 1997. LINCS: a linear constraint solver for molecular simulations. J. Comp. Chem. 18:1463-1472.
    • (1997) J. Comp. Chem. , vol.18 , pp. 1463-1472
    • Hess, B.1    Bekker, H.2    Berendsen, H.J.C.3    Fraaije, J.G.E.M.4
  • 18
    • 0033134460 scopus 로고    scopus 로고
    • Collective membrane motions in the mesoscopic range and their modulation by the binding of a monomolecular protein layer of streptavidin studied by dynamic light scattering
    • Hirn, R., R. Benz, and T. M. Bayerl. 1999. Collective membrane motions in the mesoscopic range and their modulation by the binding of a monomolecular protein layer of streptavidin studied by dynamic light scattering. Phys. Rev. E. 59:5987-5994.
    • (1999) Phys. Rev. E. , vol.59 , pp. 5987-5994
    • Hirn, R.1    Benz, R.2    Bayerl, T.M.3
  • 19
    • 0000176238 scopus 로고
    • Hydration or steric forces between amphiphilic surfaces?
    • Israelachveli, J. N., and H. Wennerström. 1990. Hydration or steric forces between amphiphilic surfaces? Langmuir. 6:873-876.
    • (1990) Langmuir , vol.6 , pp. 873-876
    • Israelachveli, J.N.1    Wennerström, H.2
  • 20
    • 0346845605 scopus 로고
    • Entropic forces between amphiphilic surfaces in liquids
    • Israelachveli, J. N., and H. Wennerström. 1992. Entropic forces between amphiphilic surfaces in liquids. J. Phys. Chem. 96:520-531.
    • (1992) J. Phys. Chem. , vol.96 , pp. 520-531
    • Israelachveli, J.N.1    Wennerström, H.2
  • 21
    • 33645941402 scopus 로고
    • The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin
    • Jorgensen, W., and J. Tirado-Rives. 1988. The OPLS potential functions for proteins. Energy minimizations for crystals of cyclic peptides and crambin. J. Am. Chem. Soc. 110:1657-1666.
    • (1988) J. Am. Chem. Soc. , vol.110 , pp. 1657-1666
    • Jorgensen, W.1    Tirado-Rives, J.2
  • 22
  • 23
    • 0000302979 scopus 로고
    • Theory of light scattering from fluctuations of membranes and monolayers
    • Kramer, L. 1971. Theory of light scattering from fluctuations of membranes and monolayers. J. Chem. Phys. 55:2097-2105.
    • (1971) J. Chem. Phys. , vol.55 , pp. 2097-2105
    • Kramer, L.1
  • 24
    • 14544292821 scopus 로고
    • Hydration vs. protrusion forces between lipid bilayers
    • Lipowsky, R., and S. Grotehans. 1993. Hydration vs. protrusion forces between lipid bilayers. Europhys. Lett. 23:599-604.
    • (1993) Europhys. Lett. , vol.23 , pp. 599-604
    • Lipowsky, R.1    Grotehans, S.2
  • 25
    • 0030815133 scopus 로고    scopus 로고
    • Raster3D photorealistic molecular graphics
    • Marritt, E. A., and D. J. Bacon. 1997. Raster3D photorealistic molecular graphics. Meth. Enzymol. 277:505-524.
    • (1997) Meth. Enzymol. , vol.277 , pp. 505-524
    • Marritt, E.A.1    Bacon, D.J.2
  • 26
    • 0027251833 scopus 로고
    • Area/lipid of bilayers from NMR
    • Nagle, J. F. 1993. Area/lipid of bilayers from NMR. Biophys. J. 64: 1476-1481.
    • (1993) Biophys. J. , vol.64 , pp. 1476-1481
    • Nagle, J.F.1
  • 27
    • 0024280716 scopus 로고
    • Structure of fully hydrated bilayer dispersions
    • Nagle, J. F., and M. C. Wiener. 1988. Structure of fully hydrated bilayer dispersions. Biochem. Biophys. Acta. 942:1-10.
    • (1988) Biochem. Biophys. Acta , vol.942 , pp. 1-10
    • Nagle, J.F.1    Wiener, M.C.2
  • 29
    • 0028124519 scopus 로고
    • Computer simulations of lipid bilayers
    • Pastor, R. W. 1994. Computer simulations of lipid bilayers. Curr. Opin. Struct. Biol. 4:486-492.
    • (1994) Curr. Opin. Struct. Biol. , vol.4 , pp. 486-492
    • Pastor, R.W.1
  • 30
    • 33646940952 scopus 로고
    • Numerical integration of the Cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • Ryckaert, J. P., G. Ciccotti, and H. J. C. Berendsen. 1977. Numerical integration of the Cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 23: 327-341.
    • (1977) J. Comput. Phys. , vol.23 , pp. 327-341
    • Ryckaert, J.P.1    Ciccotti, G.2    Berendsen, H.J.C.3
  • 32
    • 0016283654 scopus 로고
    • Dynamic structure of fatty acyl chains in a phospholipid bilayer measured by DMR
    • Seelig, J., and A. Seelig. 1974. Dynamic structure of fatty acyl chains in a phospholipid bilayer measured by DMR. Biochemistry. 13:4839-4845.
    • (1974) Biochemistry , vol.13 , pp. 4839-4845
    • Seelig, J.1    Seelig, A.2
  • 33
    • 0031438285 scopus 로고    scopus 로고
    • A computer perspective of membranes: Molecular dynamics studies of lipid bilayer systems
    • Tieleman, D. P., S.-J. Marrink, and H. J. C. Berendsen. 1997. A computer perspective of membranes: molecular dynamics studies of lipid bilayer systems. Biochim. Biophys. Acta. 1331:235-270.
    • (1997) Biochim. Biophys. Acta , vol.1331 , pp. 235-270
    • Tieleman, D.P.1    Marrink, S.-J.2    Berendsen, H.J.C.3
  • 34
    • 0030031374 scopus 로고    scopus 로고
    • Molecular dynamics investigation of the structure of a fully hydrated gel-phase dipalmitoylphosphatidylcholine bilayer
    • Tu, K., D. J. Tobias, J. K. Blasie, and M. L. Klein. 1996. Molecular dynamics investigation of the structure of a fully hydrated gel-phase dipalmitoylphosphatidylcholine bilayer. Biophys. J. 70:595-608.
    • (1996) Biophys. J. , vol.70 , pp. 595-608
    • Tu, K.1    Tobias, D.J.2    Blasie, J.K.3    Klein, M.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.