-
1
-
-
0004250845
-
-
5th ed, Lippincott Williams & Wilkins, New York
-
Knipe, D. M. and Howley, P. M. (2007) Fields Virology, 5th ed, Lippincott Williams & Wilkins, New York.
-
(2007)
Fields Virology
-
-
Knipe, D.M.1
Howley, P.M.2
-
3
-
-
57649157806
-
Virus Replication Strategies
-
(Knipe, D. M. and Howley, P. M. Eds.) pp, Lippincott Williams & Wilkins, New York
-
Ball, A. (2007) Virus Replication Strategies. In Fields Virology (Knipe, D. M. and Howley, P. M., Eds.) pp 119-138, Lippincott Williams & Wilkins, New York.
-
(2007)
Fields Virology
, pp. 119-138
-
-
Ball, A.1
-
4
-
-
32744469335
-
Viral Genome Packaging Machines: An Overview
-
(Catalano, C. E. Ed.) pp, Kluwer Academic/Plenum Publishers, New York
-
Catalano, C. E. (2005) Viral Genome Packaging Machines: An Overview. In Viral Genome Packaging Machines: Genetics, Structure, and Mechanism (Catalano, C. E., Ed.) pp 1-4, Kluwer Academic/Plenum Publishers, New York.
-
(2005)
Viral Genome Packaging Machines: Genetics, Structure, and Mechanism
, pp. 1-4
-
-
Catalano, C.E.1
-
5
-
-
33744805436
-
DNA Packaging in Double-Stranded DNA Phages
-
(Calendar, R. and Abedon, S. T. Eds.) 2nd ed. pp, Oxford University Press, New York
-
Jardine, P. J. and Anderson, D. L. (2006) DNA Packaging in Double-Stranded DNA Phages. In The Bacteriophages (Calendar, R. and Abedon, S. T., Eds.) 2nd ed., pp 49-65, Oxford University Press, New York.
-
(2006)
The Bacteriophages
, pp. 49-65
-
-
Jardine, P.J.1
Anderson, D.L.2
-
6
-
-
34249950342
-
Herpes Simplex Viruses
-
(Knipe, D. M. and Howley, P. M. Eds.) 5th ed. pp, Lippincott Williams & Wilkins, New York
-
Roizman, B., Knipe, D. M., and Whitley, R. J. (2007) Herpes Simplex Viruses. In Fields Virology (Knipe, D. M. and Howley, P. M., Eds.) 5th ed., pp 2501-2602, Lippincott Williams & Wilkins, New York.
-
(2007)
Fields Virology
, pp. 2501-2602
-
-
Roizman, B.1
Knipe, D.M.2
Whitley, R.J.3
-
7
-
-
57649226492
-
The bacteriophage DNA packaging motor
-
Rao, V. B. and Feiss, M. (2008) The bacteriophage DNA packaging motor Annu. Rev. Genet. 42, 647-681
-
(2008)
Annu. Rev. Genet.
, vol.42
, pp. 647-681
-
-
Rao, V.B.1
Feiss, M.2
-
8
-
-
80051707836
-
The DNA-packaging nanomotor of tailed bacteriophages
-
Casjens, S. R. (2011) The DNA-packaging nanomotor of tailed bacteriophages Nat. Rev. Microbiol. 9, 647-657
-
(2011)
Nat. Rev. Microbiol.
, vol.9
, pp. 647-657
-
-
Casjens, S.R.1
-
9
-
-
0001289358
-
Lambda DNA Replication
-
(Hendrix, R. W. Roberts, J. W. Stahl, F. W. and Weisberg, R. A. Eds.) pp, Cold Spring Harbor Laboratory Press, Plainview, NY
-
Furth, M. and Wickner, S. (1983) Lambda DNA Replication. In Lambda II (Hendrix, R. W., Roberts, J. W., Stahl, F. W., and Weisberg, R. A., Eds.) pp 145-174, Cold Spring Harbor Laboratory Press, Plainview, NY.
-
(1983)
Lambda II
, pp. 145-174
-
-
Furth, M.1
Wickner, S.2
-
10
-
-
27144510987
-
Cleavage and Packaging of Herpes Simplex Virus 1 DNA
-
(Catalano, C. E. Ed.) pp, Kluwer Academic/Plenum Publishers, New York
-
Baines, J. D. and Weller, S. K. (2005) Cleavage and Packaging of Herpes Simplex Virus 1 DNA. In Viral Genome Packaging Machines: Genetics, Structure, and Mechanism (Catalano, C. E., Ed.) pp 135-149, Kluwer Academic/Plenum Publishers, New York.
-
(2005)
Viral Genome Packaging Machines: Genetics, Structure, and Mechanism
, pp. 135-149
-
-
Baines, J.D.1
Weller, S.K.2
-
11
-
-
14744306883
-
Self-association properties of the bacteriophage λ terminase holoenzyme: Implications for the DNA packaging motor
-
DOI 10.1016/j.jmb.2005.01.016
-
Maluf, N. K., Yang, Q., and Catalano, C. E. (2005) Self-association properties of the bacteriophage lambda terminase holoenzyme: Implications for the DNA packaging motor J. Mol. Biol. 347, 523-542 (Pubitemid 40332362)
-
(2005)
Journal of Molecular Biology
, vol.347
, Issue.3
, pp. 523-542
-
-
Maluf, N.K.1
Yang, Q.2
Catalano, C.E.3
-
12
-
-
33845947499
-
Assembly of bacteriophage lambda terminase into a viral DNA maturation and packaging machine
-
DOI 10.1021/bi0615036
-
Maluf, N. K., Gaussier, H., Bogner, E., Feiss, M., and Catalano, C. E. (2006) Assembly of bacteriophage lambda terminase into a viral DNA maturation and packaging machine Biochemistry 45, 15259-15268 (Pubitemid 46032453)
-
(2006)
Biochemistry
, vol.45
, Issue.51
, pp. 15259-15268
-
-
Maluf, N.K.1
Gaussier, H.2
Bogner, E.3
Feiss, M.4
Catalano, C.E.5
-
13
-
-
0347724057
-
A Minimal Kinetic Model for a Viral DNA Packaging Machine
-
DOI 10.1021/bi035532h
-
Yang, Q. and Catalano, C. E. (2004) A minimal kinetic model for a viral DNA packaging machine Biochemistry 43, 289-299 (Pubitemid 38082550)
-
(2004)
Biochemistry
, vol.43
, Issue.2
, pp. 289-299
-
-
Yang, Q.1
Catalano, C.E.2
-
14
-
-
32744464185
-
Bacteriophage Lambda Terminase and the Mechanism of Viral DNA Packaging
-
(Catalano, C. E. Ed.) pp, Kluwer Academic/Plenum Publishers, New York
-
Feiss, M. and Catalano, C. E. (2005) Bacteriophage Lambda Terminase and the Mechanism of Viral DNA Packaging. In Viral Genome Packaging Machines: Genetics, Structure, and Mechanism (Catalano, C. E., Ed.) pp 5-39, Kluwer Academic/Plenum Publishers, New York.
-
(2005)
Viral Genome Packaging Machines: Genetics, Structure, and Mechanism
, pp. 5-39
-
-
Feiss, M.1
Catalano, C.E.2
-
15
-
-
33645986125
-
Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: Implications for the assembly of a genome-packaging motor
-
Ortega, M. E. and Catalano, C. E. (2006) Bacteriophage lambda gpNu1 and Escherichia coli IHF proteins cooperatively bind and bend viral DNA: Implications for the assembly of a genome-packaging motor Biochemistry 45, 5180-5189
-
(2006)
Biochemistry
, vol.45
, pp. 5180-5189
-
-
Ortega, M.E.1
Catalano, C.E.2
-
16
-
-
84859270120
-
Thermodynamic Characterization of Viral Procapsid Expansion into a Functional Capsid Shell
-
Medina, E., Nakatani, E., Kruse, S., and Catalano, C. E. (2012) Thermodynamic Characterization of Viral Procapsid Expansion into a Functional Capsid Shell J. Mol. Biol. 418, 167-180
-
(2012)
J. Mol. Biol.
, vol.418
, pp. 167-180
-
-
Medina, E.1
Nakatani, E.2
Kruse, S.3
Catalano, C.E.4
-
17
-
-
53549123557
-
Packaging of a Unit-Length Viral Genome: The Role of Nucleotides and the gpD Decoration Protein in Stable Nucleocapsid Assembly in Bacteriophage Lambda
-
Yang, Q., Maluf, N. K., and Catalano, C. E. (2008) Packaging of a Unit-Length Viral Genome: The Role of Nucleotides and the gpD Decoration Protein in Stable Nucleocapsid Assembly in Bacteriophage Lambda J. Mol. Biol. 383, 1037-1048
-
(2008)
J. Mol. Biol.
, vol.383
, pp. 1037-1048
-
-
Yang, Q.1
Maluf, N.K.2
Catalano, C.E.3
-
18
-
-
0019304084
-
Outer surface protein of bacteriophage lambda
-
DOI 10.1016/0022-2836(80)90131-X
-
Imber, R., Tsugita, A., Wurtz, M., and Hohn, T. (1980) Outer Surface Protein of Bacteriophage Lambda J. Mol. Biol. 139, 277-295 (Pubitemid 10016712)
-
(1980)
Journal of Molecular Biology
, vol.139
, Issue.3
, pp. 277-295
-
-
Imber, R.1
Tsugita, A.2
Wurtz, M.3
Hohn, T.4
-
19
-
-
0022429775
-
Processive action of terminase during sequential packaging of bacteriophage lambda chromosomes
-
Feiss, M., Sippy, J., and Miller, G. (1985) Processive action of terminase during sequential packaging of bacteriophage lambda chromosomes J. Mol. Biol. 186, 759-771
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 759-771
-
-
Feiss, M.1
Sippy, J.2
Miller, G.3
-
20
-
-
0030922718
-
Kinetic analysis of the endonuclease activity of phage λ terminase: Assembly of a catalytically competent nicking complex is rate-limiting
-
DOI 10.1021/bi963044m
-
Woods, L., Terpening, C., and Catalano, C. E. (1997) Kinetic analysis of the endonuclease activity of phage lambda terminase: Assembly of a catalytically competent nicking complex is rate-limiting Biochemistry 36, 5777-5785 (Pubitemid 27214929)
-
(1997)
Biochemistry
, vol.36
, Issue.19
, pp. 5777-5785
-
-
Woods, L.1
Terpening, C.2
Catalano, C.E.3
-
21
-
-
84856854858
-
Energy Independent Helicase Activity of a Viral Genome Packaging
-
Chang, J. R., Andrews, B. T., and Catalano, C. E. (2012) Energy Independent Helicase Activity of a Viral Genome Packaging Biochemistry 51, 391-400
-
(2012)
Biochemistry
, vol.51
, pp. 391-400
-
-
Chang, J.R.1
Andrews, B.T.2
Catalano, C.E.3
-
22
-
-
0033025726
-
Cloning, expression, and biochemical characterization of hexahistidine-tagged terminase proteins
-
Hang, Q., Woods, L., Feiss, M., and Catalano, C. E. (1999) Cloning, expression, and biochemical characterization of hexahistidine-tagged terminase proteins J. Biol. Chem. 274, 15305-15314
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 15305-15314
-
-
Hang, Q.1
Woods, L.2
Feiss, M.3
Catalano, C.E.4
-
23
-
-
8844265931
-
Sedimentation velocity analysis of highly heterogeneous systems
-
DOI 10.1016/j.ab.2004.08.039, PII S0003269704007225
-
Demeler, B. and van Holde, K. E. (2004) Sedimentation Velocity Analysis of Highly Heterogeneous Systems Anal. Biochem. 335, 279-288 (Pubitemid 39535193)
-
(2004)
Analytical Biochemistry
, vol.335
, Issue.2
, pp. 279-288
-
-
Demeler, B.1
Van Holde, K.E.2
-
24
-
-
0031020113
-
Identification and interpretation of complexity in sedimentation velocity boundaries
-
Demeler, B., Saber, H., and Hansen, J. C. (1997) Identification and interpretation of complexity in sedimentation velocity boundaries Biophys. J. 72, 397-407 (Pubitemid 27043451)
-
(1997)
Biophysical Journal
, vol.72
, Issue.1
, pp. 397-407
-
-
Demeler, B.1
Saber, H.2
Hansen, J.C.3
-
25
-
-
0042855798
-
On the analysis of protein self-association by sedimentation velocity analytical ultracentrifugation
-
DOI 10.1016/S0003-2697(03)00289-6
-
Schuck, P. (2003) On the Analysis of Protein Self-Association by Sedimentation Velocity Analytical Ultracentrifugation Anal. Biochem. 320, 104-124 (Pubitemid 36937072)
-
(2003)
Analytical Biochemistry
, vol.320
, Issue.1
, pp. 104-124
-
-
Schuck, P.1
-
26
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and Lamm equation modeling
-
Schuck, P. (2000) Size-Distribution Analysis of Macromolecules by Sedimentation Velocity Ultracentrifugation and Lamm Equation Modeling Biophys. J. 78, 1606-1619 (Pubitemid 30141584)
-
(2000)
Biophysical Journal
, vol.78
, Issue.3
, pp. 1606-1619
-
-
Schuck, P.1
-
27
-
-
0037455561
-
Biochemical characterization of bacteriophage lambda genome packaging in vitro
-
DOI 10.1006/viro.2002.1602
-
Yang, Q. and Catalano, C. E. (2003) Biochemical characterization of bacteriophage lambda genome packaging in vitro Virology 305, 276-287 (Pubitemid 36259662)
-
(2003)
Virology
, vol.305
, Issue.2
, pp. 276-287
-
-
Yang, Q.1
Catalano, C.E.2
-
28
-
-
70449584723
-
Kinetic Analysis of the Genome Packaging Reaction in Bacteriophage Lambda
-
Yang, Q., Catalano, C. E., and Maluf, N. K. (2009) Kinetic Analysis of the Genome Packaging Reaction in Bacteriophage Lambda Biochemistry 48, 10705-10715
-
(2009)
Biochemistry
, vol.48
, pp. 10705-10715
-
-
Yang, Q.1
Catalano, C.E.2
Maluf, N.K.3
-
29
-
-
0033517798
-
Kinetic characterization of the GTPase activity of phage lambda terminase: Evidence for communication between the two "nTPase" catalytic sites of the enzyme
-
Woods, L. and Catalano, C. E. (1999) Kinetic characterization of the GTPase activity of phage lambda terminase: Evidence for communication between the two "NTPase" catalytic sites of the enzyme Biochemistry 38, 14624-14630
-
(1999)
Biochemistry
, vol.38
, pp. 14624-14630
-
-
Woods, L.1
Catalano, C.E.2
-
30
-
-
0027366175
-
Kinetic characterization of the ATPase activity of the DNA packaging enzyme from bacteriophage λ
-
DOI 10.1021/bi00096a008
-
Tomka, M. A. and Catalano, C. E. (1993) Kinetic characterization of the ATPase activity of the DNA packaging enzyme from bacteriophage lambda Biochemistry 32, 11992-11997 (Pubitemid 23353636)
-
(1993)
Biochemistry
, vol.32
, Issue.45
, pp. 11992-11997
-
-
Tomka, M.A.1
Catalano, C.E.2
-
31
-
-
0030606851
-
Mutations affecting the high affinity ATPase center of gpA, the large subunit of bacteriophage λ terminase, inactivate the endonuclease activity of terminase
-
DOI 10.1006/jmbi.1996.0480
-
Hwang, Y. and Feiss, M. (1996) Mutations affecting the high affinity ATPase center of gpA, the large subunit of bacteriophage lambda terminase, inactivate the endonuclease activity of terminase J. Mol. Biol. 261, 524-535 (Pubitemid 26335944)
-
(1996)
Journal of Molecular Biology
, vol.261
, Issue.4
, pp. 524-535
-
-
Hwang, Y.1
Feiss, M.2
-
32
-
-
0029920552
-
Kinetic and mutational dissection of the two ATPase activities of terminase, the DNA packaging enzyme of bacteriophage λ
-
DOI 10.1021/bi952322z
-
Hwang, Y., Catalano, C. E., and Feiss, M. (1996) Kinetic and mutational dissection of the two ATPase activities of terminase, the DNA packaging enzyme of bacteriophage λ Biochemistry 35, 2796-2803 (Pubitemid 26099926)
-
(1996)
Biochemistry
, vol.35
, Issue.8
, pp. 2796-2803
-
-
Hwang, Y.1
Catalano, C.E.2
Feiss, M.3
-
33
-
-
0030919259
-
Mutations affecting lysine-35 of gpNu1, the small subunit of bacteriophage λ terminase, alter the strength and specificity of holoterminase interactions with DNA
-
DOI 10.1006/viro.1997.8542
-
Hwang, Y. and Feiss, M. (1997) Mutations affecting lysine-35 of gpNu1, the small subunit of bacteriophage lambda terminase, alter the strength and specificity of holoterminase interactions with DNA Virology 231, 218-230 (Pubitemid 27244188)
-
(1997)
Virology
, vol.231
, Issue.2
, pp. 218-230
-
-
Hwang, Y.1
Feiss, M.2
-
34
-
-
34848897808
-
The DNA Maturation Domain of gpA, the DNA Packaging Motor Protein of Bacteriophage Lambda, Contains an ATPase Site Associated with Endonuclease Activity
-
DOI 10.1016/j.jmb.2007.07.067, PII S0022283607010327
-
Ortega, M. E., Gaussier, H., and Catalano, C. E. (2007) The DNA maturation domain of gpA, the DNA packaging motor protein of bacteriophage lambda, contains an ATPase site associated with endonuclease activity J. Mol. Biol. 373, 851-865 (Pubitemid 47498432)
-
(2007)
Journal of Molecular Biology
, vol.373
, Issue.4
, pp. 851-865
-
-
Ortega, M.E.1
Gaussier, H.2
Catalano, C.E.3
-
35
-
-
0035282079
-
Substrate assisted catalysis - Application to G proteins
-
DOI 10.1016/S0968-0004(00)01748-5, PII S0968000400017485
-
Kosloff, M. and Selinger, Z. (2001) Substrate Assisted Catalysis, Application to G Proteins Trends Biochem. Sci. 26, 161-166 (Pubitemid 32197575)
-
(2001)
Trends in Biochemical Sciences
, vol.26
, Issue.3
, pp. 161-166
-
-
Kosloff, M.1
Selinger, Z.2
-
36
-
-
0030888043
-
Assembly of a nucleoprotein complex required for DNA packaging by bacteriophage λ
-
DOI 10.1021/bi9622682
-
Yang, Q., Hanagan, A., and Catalano, C. E. (1997) Assembly of a nucleoprotein complex required for DNA packaging by bacteriophage lambda Biochemistry 36, 2744-2752 (Pubitemid 27138555)
-
(1997)
Biochemistry
, vol.36
, Issue.10
, pp. 2744-2752
-
-
Yang, Q.1
Hanagan, A.2
Catalano, C.E.3
-
37
-
-
0027463091
-
Physical and kinetic characterization of the DNA packaging enzyme from bacteriophage λ
-
Tomka, M. A. and Catalano, C. E. (1993) Physical and kinetic characterization of the DNA packaging enzyme from bacteriophage lambda J. Biol. Chem. 268, 3056-3065 (Pubitemid 23070926)
-
(1993)
Journal of Biological Chemistry
, vol.268
, Issue.5
, pp. 3056-3065
-
-
Tomka, M.A.1
Catalano, C.E.2
-
38
-
-
0015350307
-
The Morphogenesis of Bacteriophage Lambda. IV. Identification of Gene Products and Control of the Expression of the Morphogenetic Information
-
Murialdo, H. and Siminovitch, L. (1972) The Morphogenesis of Bacteriophage Lambda. IV. Identification of Gene Products and Control of the Expression of the Morphogenetic Information Virology 48, 785-823
-
(1972)
Virology
, vol.48
, pp. 785-823
-
-
Murialdo, H.1
Siminovitch, L.2
-
39
-
-
33644844046
-
Building a virus from scratch: Assembly of an infectious virus using purified components in a rigorously defined biochemical assay system
-
DOI 10.1016/j.jmb.2006.01.013, PII S0022283606000416
-
Gaussier, H., Yang, Q., and Catalano, C. E. (2006) Building a virus from scratch: Assembly of an infectious virus using purified components in a rigorously defined biochemical assay system J. Mol. Biol. 357, 1154-1166 (Pubitemid 43361922)
-
(2006)
Journal of Molecular Biology
, vol.357
, Issue.4
, pp. 1154-1166
-
-
Gaussier, H.1
Yang, Q.2
Catalano, C.E.3
-
40
-
-
0033966457
-
The terminase enzyme from bacteriophage lambda: A DNA-packaging machine
-
DOI 10.1007/s000180050503
-
Catalano, C. E. (2000) The terminase enzyme from bacteriophage lambda: A DNA-packaging machine Cell. Mol. Life Sci. 57, 128-148 (Pubitemid 30106655)
-
(2000)
Cellular and Molecular Life Sciences
, vol.57
, Issue.1
, pp. 128-148
-
-
Catalano, C.E.1
-
41
-
-
0029129145
-
Virus DNA packaging: The strategy used by phage lambda
-
Catalano, C. E., Cue, D., and Feiss, M. (1995) Virus DNA packaging: The strategy used by phage lambda Mol. Microbiol. 16, 1075-1086
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 1075-1086
-
-
Catalano, C.E.1
Cue, D.2
Feiss, M.3
-
42
-
-
0001035136
-
Complete Annotated Lambda Sequence
-
(Hendrix, R. W. Roberts, J. W. Stahl, F. W. and Weisberg, R. A. Eds.) Cold Spring Harbor Laboratory Press, Plainview, NY
-
Daniels, D., Schroeder, J., Szybalski, W., Sanger, F., Coulson, A., Hong, G., Hill, D., Petersen, G., and Blattner, F. (1983) Complete Annotated Lambda Sequence. In Lambda II (Hendrix, R. W., Roberts, J. W., Stahl, F. W., and Weisberg, R. A., Eds.) Cold Spring Harbor Laboratory Press, Plainview, NY.
-
(1983)
Lambda II
-
-
Daniels, D.1
Schroeder, J.2
Szybalski, W.3
Sanger, F.4
Coulson, A.5
Hong, G.6
Hill, D.7
Petersen, G.8
Blattner, F.9
-
43
-
-
0026749374
-
Mutations Abolishing the Endonuclease Activity of Bacteriophage Lambda Terminase Lie in Two Distinct Regions of the A gene, One of Which May Encode a "leucine zipper" DNA-Binding Domain
-
Davidson, A. R. and Gold, M. (1992) Mutations Abolishing the Endonuclease Activity of Bacteriophage Lambda Terminase Lie in Two Distinct Regions of the A gene, One of Which May Encode a "Leucine zipper" DNA-Binding Domain Virology 189, 21-30
-
(1992)
Virology
, vol.189
, pp. 21-30
-
-
Davidson, A.R.1
Gold, M.2
-
44
-
-
17044403057
-
Type II Restriction Endonucleases: Structure and Mechanism
-
Pingoud, A., Fuxreiter, M., Pingoud, V., and Wende, W. (2005) Type II Restriction Endonucleases: Structure and Mechanism Cell. Mol. Life Sci. 62, 685-707
-
(2005)
Cell. Mol. Life Sci.
, vol.62
, pp. 685-707
-
-
Pingoud, A.1
Fuxreiter, M.2
Pingoud, V.3
Wende, W.4
-
45
-
-
0029893874
-
Mechanisms of helicase-catalyzed DNA unwinding
-
Lohman, T. M. and Bjornson, K. P. (1996) Mechanisms of Helicase-Catalyzed DNA Unwinding Annu. Rev. Biochem. 65, 169-214 (Pubitemid 26250608)
-
(1996)
Annual Review of Biochemistry
, vol.65
, pp. 169-214
-
-
Lohman, T.M.1
Bjornson, K.P.2
-
46
-
-
0345492316
-
Macromolecular complexes that unwind nucleic acids
-
DOI 10.1002/bies.10369
-
von Hippel, P. H. and Delagoutte, E. (2003) Macromolecular Complexes That Unwind Nucleic Acids BioEssays 25, 1168-1177 (Pubitemid 37499317)
-
(2003)
BioEssays
, vol.25
, Issue.12
, pp. 1168-1177
-
-
Von Hippel, P.H.1
Delagoutte, E.2
-
47
-
-
80053575452
-
Dynamic Coupling between the Motors of DNA Replication: Hexameric Helicase, DNA Polymerase, and Primase
-
Patel, S. S., Pandey, M., and Nandakumar, D. (2011) Dynamic Coupling Between the Motors of DNA Replication: Hexameric Helicase, DNA Polymerase, and Primase Curr. Opin. Chem. Biol. 15, 595-605
-
(2011)
Curr. Opin. Chem. Biol.
, vol.15
, pp. 595-605
-
-
Patel, S.S.1
Pandey, M.2
Nandakumar, D.3
-
48
-
-
0023730148
-
Late Stages in Bacteriophage Lambda Head Morphogenesis: In Vitro Studies on the Action of the Bacteriophage Lambda D-Gene and W-Gene Products
-
Perucchetti, R., Parris, W., Becker, A., and Gold, M. (1988) Late Stages in Bacteriophage Lambda Head Morphogenesis: In Vitro Studies on the Action of the Bacteriophage Lambda D-Gene and W-Gene Products Virology 165, 103-114
-
(1988)
Virology
, vol.165
, pp. 103-114
-
-
Perucchetti, R.1
Parris, W.2
Becker, A.3
Gold, M.4
-
49
-
-
78651319695
-
Natural and Engineered Nicking Endonucleases: From Cleavage Mechanism to Engineering of Strand-Specificity
-
Chan, S.-H., Stoddard, B. L., and Xu, S.-y. (2011) Natural and Engineered Nicking Endonucleases: From Cleavage Mechanism to Engineering of Strand-Specificity Nucleic Acids Res. 39, 1-18
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1-18
-
-
Chan, S.-H.1
Stoddard, B.L.2
Xu, S.-y.3
-
50
-
-
0029129293
-
Interaction of Terminase, the DNA Packaging Enzyme of Phage Lambda, with its cosDNA Substrate
-
Higgins, R. R. and Becker, A. (1995) Interaction of Terminase, the DNA Packaging Enzyme of Phage Lambda, with its cosDNA Substrate J. Mol. Biol. 252, 31-46
-
(1995)
J. Mol. Biol.
, vol.252
, pp. 31-46
-
-
Higgins, R.R.1
Becker, A.2
-
51
-
-
0038700763
-
Structure of the replicative helicase of the oncoprotein SV40 large tumour antigen
-
DOI 10.1038/nature01691
-
Li, D., Zhao, R., Lilyestrom, W., Gai, D., Zhang, R., DeCaprio, J. A., Fanning, E., Jochimiak, A., Szakonyi, G., and Chen, X. S. (2003) Structure of the Replicative Helicase of the Oncoprotein SV40 Large Tumour Antigen Nature 423, 512-518 (Pubitemid 36648571)
-
(2003)
Nature
, vol.423
, Issue.6939
, pp. 512-518
-
-
Li, D.1
Zhao, R.2
Lilyestrom, W.3
Gai, D.4
Zhang, R.5
DeCaprio, J.A.6
Fanning, E.7
Jochimiak, A.8
Szakonyi, G.9
Chen, X.S.10
-
52
-
-
29644436609
-
Double hexamer disruption and biochemical activities of Methanobacterium thermoautotrophicum MCM
-
DOI 10.1074/jbc.M509773200
-
Fletcher, R. J., Shen, J., Gomez-Llorente, Y., San Martin, C., Carazo, J. M., and Chen, X. S. (2005) Double Hexamer Disruption and Biochemical Activities of Methanobacterium thermoautotrophicum MCM J. Biol. Chem. 280, 42405-42410 (Pubitemid 43023213)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.51
, pp. 42405-42410
-
-
Fletcher, R.J.1
Shen, J.2
Gomez-Llorente, Y.3
San Martin, C.4
Carazo, J.M.5
Chen, X.S.6
-
53
-
-
26244431891
-
A defined in Vitro system for DNA packaging by the bacteriophage SPP1: Insights into the headful packaging mechanism
-
DOI 10.1016/j.jmb.2005.08.063, PII S0022283605010302
-
Oliveira, L., Alonso, J. C., and Tavares, P. (2005) A Defined in Vitro System for DNA Packaging by the Bacteriophage SPP1: Insights into the Headful Packaging Mechanism J. Mol. Biol. 353, 529-539 (Pubitemid 41414732)
-
(2005)
Journal of Molecular Biology
, vol.353
, Issue.3
, pp. 529-539
-
-
Oliveira, L.1
Alonso, J.C.2
Tavares, P.3
-
54
-
-
36749028241
-
Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability
-
DOI 10.1073/pnas.0704008104
-
Fuller, D. N., Raymer, D. M., Kottadiel, V. I., Rao, V. B., and Smith, D. E. (2007) Single phage T4 DNA packaging motors exhibit large force generation, high velocity, and dynamic variability Proc. Natl. Acad. Sci. U.S.A. 104, 16868-16873 (Pubitemid 350210957)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.43
, pp. 16868-16873
-
-
Fuller, D.N.1
Raymer, D.M.2
Kottadiel, V.I.3
Rao, V.B.4
Smith, D.E.5
-
55
-
-
79952264222
-
A Promiscuous DNA Packaging Machine from Bacteriophage T4
-
Zhang, Z., Kottadiel, V. I., Vafabakhsh, R., Dai, L., Chemla, Y. R., Ha, T., and Rao, V. B. (2011) A Promiscuous DNA Packaging Machine from Bacteriophage T4 PLoS Biol. 9, e1000592
-
(2011)
PLoS Biol.
, vol.9
, pp. 1000592
-
-
Zhang, Z.1
Kottadiel, V.I.2
Vafabakhsh, R.3
Dai, L.4
Chemla, Y.R.5
Ha, T.6
Rao, V.B.7
-
56
-
-
0035936698
-
Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010
-
DOI 10.1006/jmbi.2000.4398
-
Niedenzu, T., Röleke, D., Bains, G., Scherzinger, E., and Saenger, W. (2001) Crystal structure of the hexameric replicative helicase RepA of plasmid RSF1010 J. Mol. Biol. 306, 479-487 (Pubitemid 33027716)
-
(2001)
Journal of Molecular Biology
, vol.306
, Issue.3
, pp. 479-487
-
-
Niedenzu, T.1
Roleke, D.2
Bains, G.3
Scherzinger, E.4
Saenger, W.5
-
57
-
-
0032716810
-
Crystal Structure of the Helicase Domain from the Replicative Helicase-Primase of Bacteriophage T7
-
Sawaya, M. R., Guo, S., Tabor, S., Richardson, C. C., and Ellenberger, T. (1999) Crystal Structure of the Helicase Domain from the Replicative Helicase-Primase of Bacteriophage T7 Cell 99, 167-177
-
(1999)
Cell
, vol.99
, pp. 167-177
-
-
Sawaya, M.R.1
Guo, S.2
Tabor, S.3
Richardson, C.C.4
Ellenberger, T.5
-
58
-
-
0024531901
-
Facilitated target location in biological systems
-
von Hippel, P. H. and Berg, O. G. (1989) Facilitated Target Location in Biological Systems J. Biol. Chem. 264, 675-678 (Pubitemid 19038039)
-
(1989)
Journal of Biological Chemistry
, vol.264
, Issue.2
, pp. 675-678
-
-
Von Hippel, P.H.1
Berg, O.G.2
-
59
-
-
58149345492
-
Protein Sliding along DNA: Dynamics and Structural Characterization
-
Givaty, O. and Levy, Y. (2009) Protein Sliding along DNA: Dynamics and Structural Characterization J. Mol. Biol. 385, 1087-1097
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 1087-1097
-
-
Givaty, O.1
Levy, Y.2
-
60
-
-
76649104763
-
Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine
-
Zhao, H., Finch, C. J., Sequeira, R. D., Johnson, B. A., Johnson, J. E., Casjens, S. R., and Tang, L. (2010) Crystal structure of the DNA-recognition component of the bacterial virus Sf6 genome-packaging machine Proc. Natl. Acad. Sci. U.S.A. 107, 1971-1976
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 1971-1976
-
-
Zhao, H.1
Finch, C.J.2
Sequeira, R.D.3
Johnson, B.A.4
Johnson, J.E.5
Casjens, S.R.6
Tang, L.7
-
61
-
-
84856373698
-
Structural basis for DNA recognition and loading into a viral packaging motor
-
Büttner, C. R., Chechik, M., Ortiz-Lombardía, M., Smits, C., Ebong, I.-O., Chechik, V., Jeschke, G., Dykeman, E., Benini, S., Robinson, C. V., Alonso, J. C., and Antson, A. A. (2012) Structural basis for DNA recognition and loading into a viral packaging motor Proc. Natl. Acad. Sci. U.S.A. 109, 811-816
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 811-816
-
-
Büttner, C.R.1
Chechik, M.2
Ortiz-Lombardía, M.3
Smits, C.4
Ebong, I.-O.5
Chechik, V.6
Jeschke, G.7
Dykeman, E.8
Benini, S.9
Robinson, C.V.10
Alonso, J.C.11
Antson, A.A.12
-
62
-
-
84856402988
-
Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages
-
Sun, S., Gao, S., Kondabagil, K., Xiang, Y., Rossmann, M. G., and Rao, V. B. (2012) Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages Proc. Natl. Acad. Sci. U.S.A. 109, 817-822
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 817-822
-
-
Sun, S.1
Gao, S.2
Kondabagil, K.3
Xiang, Y.4
Rossmann, M.G.5
Rao, V.B.6
-
63
-
-
18444412561
-
Insights into specific DNA recognition during the assembly of a viral genome packaging machine
-
DOI 10.1016/S1097-2765(02)00537-3
-
de Beer, T., Fang, J., Ortega, M., Yang, Q., Maes, L., Duffy, C., Berton, N., Sippy, J., Overduin, M., Feiss, M., and Catalano, C. E. (2002) Insights into specific DNA recognition during the assembly of a viral genome packaging machine Mol. Cell 9, 981-991 (Pubitemid 34626668)
-
(2002)
Molecular Cell
, vol.9
, Issue.5
, pp. 981-991
-
-
De Beer, T.1
Fang, J.2
Ortega, M.3
Yang, Q.4
Maes, L.5
Duffy, C.6
Berton, N.7
Sippy, J.8
Overduin, M.9
Feiss, M.10
Catalano, C.E.11
-
64
-
-
0035827637
-
Biophysical characterization of the DNA binding domain of gpNu1, a viral DNA packaging protein
-
Bain, D. L., Berton, N., Ortega, M., Baran, J., Yang, Q., and Catalano, C. E. (2001) Biophysical characterization of the DNA binding domain of gpNu1, a viral DNA packaging protein J. Biol. Chem. 276, 20175-20181
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 20175-20181
-
-
Bain, D.L.1
Berton, N.2
Ortega, M.3
Baran, J.4
Yang, Q.5
Catalano, C.E.6
-
65
-
-
0033524452
-
Cloning, expression, and characterization of a DNA binding domain of gpNu1, a phage λ DNA packaging protein
-
DOI 10.1021/bi981271d
-
Yang, Q., de Beer, T., Woods, L., Meyer, J. D., Manning, M. C., Overduin, M., and Catalano, C. E. (1999) Cloning, expression, and characterization of a DNA binding domain of gpNu1, a phage lambda DNA packaging protein Biochemistry 38, 465-477 (Pubitemid 29035718)
-
(1999)
Biochemistry
, vol.38
, Issue.1
, pp. 465-477
-
-
Yang, Q.1
De Beer, T.2
Woods, L.3
Meyer, J.D.4
Manning, M.C.5
Overduin, M.6
Catalano, C.E.7
-
66
-
-
57649228017
-
The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces
-
Sun, S., Kondabagil, K., Draper, B., Alam, T. I., Bowman, V. D., Zhang, Z., Hegde, S., Fokine, A., Rossmann, M. G., and Rao, V. B. (2008) The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces Cell 135, 1251-1262
-
(2008)
Cell
, vol.135
, pp. 1251-1262
-
-
Sun, S.1
Kondabagil, K.2
Draper, B.3
Alam, T.I.4
Bowman, V.D.5
Zhang, Z.6
Hegde, S.7
Fokine, A.8
Rossmann, M.G.9
Rao, V.B.10
-
67
-
-
84864848769
-
Structure of P22 Headful Packaging Nuclease
-
Roy, A. and Cingolani, G. (2012) Structure of P22 Headful Packaging Nuclease J. Biol. Chem. 287, 28196-28205
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 28196-28205
-
-
Roy, A.1
Cingolani, G.2
-
68
-
-
67349101332
-
Structural Basis for the Nuclease Activity of a Bacteriophage Large Terminase
-
Smits, C., Chechik, M., Kovalevskiy, O. V., Shevtsov, M. B., Foster, A. W., Alonso, J. C., and Antson, A. A. (2009) Structural Basis for the Nuclease Activity of a Bacteriophage Large Terminase EMBO Rep. 10, 592-598
-
(2009)
EMBO Rep.
, vol.10
, pp. 592-598
-
-
Smits, C.1
Chechik, M.2
Kovalevskiy, O.V.3
Shevtsov, M.B.4
Foster, A.W.5
Alonso, J.C.6
Antson, A.A.7
-
69
-
-
77957979861
-
Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain
-
Nadal, M., Mas, P. J., Blanco, A. G., Arnan, C., Solà, M., Hart, D. J., and Coll, M. (2010) Structure and inhibition of herpesvirus DNA packaging terminase nuclease domain Proc. Natl. Acad. Sci. U.S.A. 107, 16078-16083
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 16078-16083
-
-
Nadal, M.1
Mas, P.J.2
Blanco, A.G.3
Arnan, C.4
Solà, M.5
Hart, D.J.6
Coll, M.7
-
70
-
-
48149087104
-
Defining Molecular and Domain Boundaries in the Bacteriophage φ-29 DNA Packaging Motor
-
Morais, M. C., Koti, J. S., Bowman, V. D., Reyes-Aldrete, E., Anderson, D. L., and Rossmann, M. G. (2008) Defining Molecular and Domain Boundaries in the Bacteriophage φ-29 DNA Packaging Motor Structure 16, 1267-1274
-
(2008)
Structure
, vol.16
, pp. 1267-1274
-
-
Morais, M.C.1
Koti, J.S.2
Bowman, V.D.3
Reyes-Aldrete, E.4
Anderson, D.L.5
Rossmann, M.G.6
-
71
-
-
34247337031
-
The phi29 DNA Packaging Motor: Seeking the Mechanism
-
(Catalano, C. E. Ed.) pp, Kluwer Academic/Plenum Publishers, New York
-
Anderson, D. and Grimes, S. (2005) The phi29 DNA Packaging Motor: Seeking the Mechanism. In Viral Genome Packaging Machines: Genetics, Structure, and Mechanism (Catalano, C. E., Ed.) pp 103-116, Kluwer Academic/Plenum Publishers, New York.
-
(2005)
Viral Genome Packaging Machines: Genetics, Structure, and Mechanism
, pp. 103-116
-
-
Anderson, D.1
Grimes, S.2
-
72
-
-
34447539077
-
Adenoviridae: The Viruses and Their Replication
-
(Knipe, D. M. and Howley, P. M. Eds.) 5h ed. pp, Lippincott Williams & Wilkins, Philadelphia
-
Berk, A. J. (2007) Adenoviridae: The Viruses and Their Replication. In Fields Virology (Knipe, D. M. and Howley, P. M., Eds.) 5h ed., pp 2355-2394, Lippincott Williams & Wilkins, Philadelphia.
-
(2007)
Fields Virology
, pp. 2355-2394
-
-
Berk, A.J.1
-
73
-
-
79952802006
-
Specificity of Interactions among the DNA-packaging Machine Components of T4-related Bacteriophages
-
Gao, S. and Rao, V. B. (2011) Specificity of Interactions among the DNA-packaging Machine Components of T4-related Bacteriophages J. Biol. Chem. 286, 3944-3956
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 3944-3956
-
-
Gao, S.1
Rao, V.B.2
|