DNA microarray in the nano era: Opportunities and challenges

WMSCI 2008 - The 12th World Multi-Conference on Systemics, Cybernetics and Informatics, Jointly with the 14th International Conference on Information Systems Analysis and Synthesis, ISAS 2008 - Proc.

Volumn 8, Issue , 2008, Pages 52-57

  Zhou, Dan ^a   Xue, Jin ^a  

^a UNIVERSITY OF CALIFORNIA SAN DIEGO   (United States)

Author keywords

Application; Cellular response; DNA microarray; Nanomaterials; Toxicity

Indexed keywords

BIOLOGICAL RESPONSE; BROAD APPLICATION; CELLULAR RESPONSE; DNA MICRO-ARRAY; DNA MICROARRAY TECHNOLOGY; POTENTIAL APPLICATIONS; PREDICTIVE MODELS; SURFACE AREA; SYSTEMATIC EVALUATION; SYSTEMS BIOLOGY; TOXIC EFFECT; VOLUME RATIO;

APPLICATIONS; CYBERNETICS; INFORMATION SCIENCE; INFORMATION SYSTEMS; MANAGEMENT INFORMATION SYSTEMS; NANOSTRUCTURED MATERIALS; NANOTECHNOLOGY; SYSTEMS ANALYSIS; TOXICITY;

NANOPARTICLES;

EID: 84869447316     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper

References (24)

1. C.M. Sayes et al., "Nano-C60 Cytotoxicity is Due to Lipid Peroxidation", Biomaterials, Vol. 26, No. 36, 2005, pp. 7587-7595. (Pubitemid 41187558)
2. W.R. Funnell et al., "Three-dimensional Reconstruction of Cell Nuclei, Internalized Quantum Dots and Sites of Lipid Peroxidation", Journal of Nanobiotechnology, Vol. 4, pp. 10.
3. T. Zhang et al., "Cellular Effect of High Doses of Silica-coated Quantum Dot Profiled with High Throughput Gene Expression Analysis and High Content Cellomics Measurements", Nano Letters, Vol. 6, No. 4, 2006, pp. 800-808.
4. X.B. Wang et al., "Nanoparticle Realgar Powders Induce Apoptosis in U937 Cells Through Caspase MAPK and Mitochondrial Pathways", Archives of Pharmacal Research, Vol. 30, No. 5, 2007, pp. 653-658.
5. H.A. Jeng et al., "Toxicity of Metal Oxide Nanoparticles in Mammalian Cells", Journal of Environmental Science and Health. Part A, Toxic/Hazardous Substances & Environmental Engineering, Vol. 41, No. 12, 2006, pp. 2699-2711.
6. H. Yamawaki et al., "Mechanisms Underlying Nano-sized Air-pollution-mediated Progression of Atherosclerosis: Carbon Black Causes Cytotoxic Injury/Inflammation and Inhibits Cell Growth in Vascular Endothelial Cells", Circulation Journal, Vol. 70, No. 1, 2006, pp. 129-140. (Pubitemid 43021246)
7. H.W. Chen et al., "Titanium Dioxide Nanoparticles Induce Emphysema-like Lung Injury in Mice", FASEB Journal, Vol. 20, No. 13, 2006, pp. 2393-2395.
8. T.B. Henry et al, "Attributing Effects of Aqueous C60 Nano-aggregates to Tetrahydrofuran Decomposition Products in Larval Zebrafish by Assessment of Gene Expression", Environmental Health Perspectives, Vol. 115, No. 7, 2007, pp. 1059-1065. (Pubitemid 47317073)
9. E. Papis et al., "Gene Expression in Nanotoxicology Research: Analysis by Differential Display in BALB3T3 Fibroblasts Exposed to Cobalt Particles and Ions", Toxicology Letters, Vol. 170, No. 3, 2007, pp.185-192. (Pubitemid 46710271)
10. A. Arenz et al., "Gene Expression Modulation in A549 Human Lung Cells in Response to Combustion-generated Nano-sized Particles", Annals of the New York Academy of Sciences, Vol. 1091, 2006, pp. 170-183. (Pubitemid 47092234)
11. D.J. Lockhart et al., "Expression Monitoring by Hybridization to High-density Oligonucleotide Array", Nature Biotechnology, Vol. 14, No. 13, 1996, pp. 1675-1680. (Pubitemid 26414810)
12. M. Schena et al., "Quantitative Monitoring of Gene Expression Pattern with a Complementary DNA Microarray", Science, Vol. 270, No. 5235, 1995, pp. 467-470.
13. D. Zhou et al., "Experimental Selection for Drosophila Survival in Extremely Low 02 Environment", PLoS ONE, Vol. 2, 2007, e490.
14. G. Li et al., "Effect of Carbon Dioxide on Neonatal Mouse Lung: A Genomic Approach", Journal of Applied Physiology, Vol. 101, 2006, pp. 1556-1564. (Pubitemid 44904474)
15. C. Fan et al., "Gene Expression and Phenotypic Characterization of Mouse Heart after Chronic Constant or Intermittent Hypoxia", Physiological Genomics, Vol. 22, 2005, pp. 292-307. (Pubitemid 41356361)
16. + Exchanger 1 Deficiency Alters Gene Expression in Mouse Brain", Physiological Genomics, Vol. 18, 2004, pp. 331-339. (Pubitemid 39319517)
17. A. Brazma et al., "Minimum Information about a Microarray Experiment (MIAME)-toward Standards for Microarray Data", Nature Genetics, Vol. 29, 2001, pp. 365-371. (Pubitemid 34326681)
18. S.C. Baker et al., "The External RNA Controls Consortium: A Progress Report", Nature Methods, Vol. 2, 2005, pp. 731-734. (Pubitemid 41486201)
19. L. Shi et al., "The MicroArray Quality Control (MAQC) Project Shows Inter- and Intraplatform Reproducibility of Gene Expression Measurements", Nature Biotechnology, Vol. 24, 2006, pp. 1151-1161. (Pubitemid 44359727)
20. C.L. Yauk et al., "Review of the Literature Examining the Correlation among DNA Microarray Technologies", Environmental and Molecular Mutagenesis, Vol. 48, 2007, pp. 380-394. (Pubitemid 47011767)
21. nd, 2008, Orlando, FL, USA (in press).
22. nd, 2008, Orlando, FL, USA (in press).
23. nd, 2008, Orlando, FL, USA (in press).
24. nd, 2008, Orlando, FL, USA (in press).