Phylogenetic analysis of non-O157 Shiga toxin-producing Escherichia coli strains by whole-genome sequencing

Journal of Clinical Microbiology

Volumn 50, Issue 12, 2012, Pages 4123-4127

  Ju, Wenting ^a   Cao, Guojie ^a   Rump, Lydia ^a   Strain, Errol ^b   Luo, Yan ^b   Timme, Ruth ^b   Allard, Marc ^b   Zhao, Shaohua ^b   Brown, Eric ^b   Meng, Jianghong ^a  

^a UNIVERSITY OF MARYLAND   (United States)

^b CENTER FOR DRUG EVALUATION AND RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ANTIGEN; H ANTIGEN; TRANSFER RNA; UNCLASSIFIED DRUG;

ARTICLE; ASPC GENE; BACTERIAL GENOME; BACTERIAL STRAIN; CLPX GENE; FADD GENE; FOOD POISONING; FOOD QUALITY; FOOD SAFETY; GENE LOCUS; GENETIC ANALYSIS; GENETIC ASSOCIATION; HEMOLYTIC UREMIC SYNDROME; HEMORRHAGIC COLITIS; HOUSEKEEPING GENE; ICDA GENE; LYSP GENE; MDH GENE; MOLECULAR EVOLUTION; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; PULSED FIELD GEL ELECTROPHORESIS; PYROSEQUENCING; QUALITY CONTROL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SEROTYPE; SHIGA TOXIN PRODUCING ESCHERICHIA COLI; SINGLE NUCLEOTIDE POLYMORPHISM; SPECIES DISTRIBUTION; UIDA GENE;

CLUSTER ANALYSIS; ESCHERICHIA COLI INFECTIONS; FOODBORNE DISEASES; GENOME, BACTERIAL; HUMANS; MOLECULAR EPIDEMIOLOGY; PHYLOGENY; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY; SHIGA-TOXIGENIC ESCHERICHIA COLI;

ESCHERICHIA COLI;

EID: 84869224450     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.02262-12     Document Type: Article

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