Complete genome sequence of bacteriophage phiAC-1 infecting Acinetobacter soli strain KZ-1

Journal of Virology

Volumn 86, Issue 23, 2012, Pages 13131-13132

  Kim, Ji Hyung ^a   Oh, Chulhong ^a   Choresca, Casiano H ^b   Shin, Sang Phil ^b   Han, Jee Eun ^b   Jun, Jin Woo ^b   Heo, Soo Jin ^a   Kang, Do Hyung ^a   Park, Se Chang ^b  

^a Korea Research Institute of Ships and Ocean Engineering   (South Korea)

^b Seoul National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

ACINETOBACTER; ACINETOBACTER SOLI; BACTERIAL STRAIN; BACTERIOPHAGE; BACTERIOPHAGE PHIAC 1; DNA BASE COMPOSITION; GENE FUNCTION; GENE IDENTIFICATION; GENE SEQUENCE; GENOME ANALYSIS; GENOME SIZE; NONHUMAN; NOTE; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; STRAIN IDENTIFICATION; VIRUS GENOME; VIRUS MORPHOGENESIS;

ACINETOBACTER; BASE COMPOSITION; BASE SEQUENCE; COMPUTATIONAL BIOLOGY; GENOME, VIRAL; MOLECULAR SEQUENCE DATA; MYOVIRIDAE; REPUBLIC OF KOREA; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA;

ACINETOBACTER; MYOVIRIDAE;

EID: 84869221229     PISSN: 0022538X     EISSN: 10985514     Source Type: Journal    
DOI: 10.1128/JVI.02454-12     Document Type: Note

References (13)

1. Beceiro A, et al. 2009. Genetic variability among ampC genes from Acinetobacter genomic species 3. Antimicrob. Agents Chemother. 53:1177-1184.
2. Berlau J, Aucken HM, Malnick H, Pitt TL. 1999. Distribution of Acinetobacter species on skin of healthy humans. Eur. J. Clin. Microbiol. Infect. Dis. 18:179-183.
3. Berlau J, Aucken HM, Houang E, Pitt TL. 1999. Isolation of Acinetobacter spp. including A. baumannii from vegetables: implications for hospital-acquired infections. J. Hosp. Infect. 42:201-204.
4. Chang KC, et al. 2011. Genomic analysis of bacteriophage φAB1, a φKMV-like virus infecting multidrug-resistant Acinetobacter baumannii. Genomics 97:249-255.
5. Delcher AL, Bratke KA, Powers EC, Salzberg SL. 2007. Identifying bacterial genes and endosymbiont DNA with Glimmer. Bioinformatics 23:673-679.
6. Kim D, et al. 2008. Acinetobacter soli sp. nov., isolated from forest soil. J. Microbiol. 46:396-401.
7. Li P, et al. 2012. Bioinformatic analysis of the Acinetobacter baumannii phage AB1 genome. Gene 507:125-134.
8. Lowe TM, Eddy SR. 1997. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
9. Lukashin AV, Borodovsky M. 1998. GeneMark.hmm: New solutions for gene finding. Nucleic Acids Res. 26:1107-1115.
10. Pellegrino FL, et al. 2011. Acinetobacter soli as a cause of bloodstream infection in a neonatal intensive care unit. J. Clin. Microbiol. 49:2283-2285.
11. Petrov V, Ratnayaka S, Nolan J, Miller E, Karam J. 2010. Genomes of the T4-related bacteriophages as windows on microbial genome evolution. Virol. J. 7:292.
12. Popova AV, Zhilenkov EL, Myakinina VP, Krasilnikova VM, Volozhantsev NV. 2012. Isolation and characterization of wide host range lytic bacteriophage AP22 infecting Acinetobacter baumannii. FEMS Microbiol. Lett. 332:40-46.
13. Sambrook J, Fritsch EF, Maniatis T. 2001. Molecular cloning: a laboratory manual, 3rd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.