-
1
-
-
12744281147
-
Retrotransposable elements on the W chromosome of the silkworm, Bombyx mori
-
Abe H, Mita K, Yasukochi Y, Oshiki T, Shimada T. 2005. Retrotransposable elements on the W chromosome of the silkworm, Bombyx mori. Cytogenet Genome Res. 110:144-151.
-
(2005)
Cytogenet Genome Res.
, vol.110
, pp. 144-151
-
-
Abe, H.1
Mita, K.2
Yasukochi, Y.3
Oshiki, T.4
Shimada, T.5
-
2
-
-
70049087749
-
Gene transfer and diversification of microbial eukaryotes
-
Andersson JO. 2009. Gene transfer and diversification of microbial eukaryotes. Annu Rev Microbiol. 63:177-193.
-
(2009)
Annu Rev Microbiol.
, vol.63
, pp. 177-193
-
-
Andersson, J.O.1
-
3
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215:403-410.
-
(1990)
J Mol Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
4
-
-
65549165405
-
Horizontal gene transfer in eukaryotic parasites: A case study of Entamoeba histolytica and Trichomonas vaginalis
-
Alsmark UC, Sicheritz-Ponten T, Foster PG, Hirt RP, Embley TM. 2009. Horizontal gene transfer in eukaryotic parasites: a case study of Entamoeba histolytica and Trichomonas vaginalis. Methods Mol Biol. 532:489-500.
-
(2009)
Methods Mol Biol.
, vol.532
, pp. 489-500
-
-
Alsmark, U.C.1
Sicheritz-Ponten, T.2
Foster, P.G.3
Hirt, R.P.4
Embley, T.M.5
-
5
-
-
62349104354
-
Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes
-
Bartolome C, Bello X, Maside X. 2009. Widespread evidence for horizontal transfer of transposable elements across Drosophila genomes. Genome Biol. 10:R22.
-
(2009)
Genome Biol.
, vol.10
-
-
Bartolome, C.1
Bello, X.2
Maside, X.3
-
6
-
-
25444439861
-
GenBank
-
Benson DA, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW. 2011. GenBank. Nucleic Acids Res. 39(Database issue):D32-D37.
-
(2011)
Nucleic Acids Res.
, vol.39
, Issue.DATABASE ISSUE
-
-
Benson, D.A.1
Karsch-Mizrachi, I.2
Lipman, D.J.3
Ostell, J.4
Sayers, E.W.5
-
7
-
-
0028696781
-
Horizontal transmission versus ancient origin: Mariner in the witness box
-
Capy P, Langin T, Bigot Y, Brunet F, Daboussi MJ, Periquet G, David JR, Hartl DL. 1994. Horizontal transmission versus ancient origin: mariner in the witness box. Genetica 93:161-170.
-
(1994)
Genetica
, vol.93
, pp. 161-170
-
-
Capy, P.1
Langin, T.2
Bigot, Y.3
Brunet, F.4
Daboussi, M.J.5
Periquet, G.6
David, J.R.7
Hartl, D.L.8
-
8
-
-
0030851812
-
A phylogenetic perspective on P transposable element evolution in Drosophila
-
Clark JB, Kidwell MG. 1997. A phylogenetic perspective on P transposable element evolution in Drosophila. Proc Natl Acad Sci U S A. 94: 11428-11433.
-
(1997)
Proc Natl Acad Sci U S A.
, vol.94
, pp. 11428-11433
-
-
Clark, J.B.1
Kidwell, M.G.2
-
10
-
-
18044405184
-
Multiple events of horizontal transfer of the Minos transposable element between Drosophila species
-
de Almeida LM, Carareto CM. 2005. Multiple events of horizontal transfer of the Minos transposable element between Drosophila species. Mol Phylogenet Evol. 35:583-594.
-
(2005)
Mol Phylogenet Evol.
, vol.35
, pp. 583-594
-
-
De Almeida, L.M.1
Carareto, C.M.2
-
11
-
-
0028053230
-
A proposed superfamily of transposase genes: Transposon-like elements in ciliated protozoa and a common D35E motif
-
Doak TG, Doerder FP, Jahn CL, Herrick G. 1994. A proposed superfamily of transposase genes: transposon-like elements in ciliated protozoa and a common D35E motif. Proc Natl Acad Sci U S A. 91: 942-946.
-
(1994)
Proc Natl Acad Sci U S A.
, vol.91
, pp. 942-946
-
-
Doak, T.G.1
Doerder, F.P.2
Jahn, C.L.3
Herrick, G.4
-
12
-
-
33846140799
-
In vitro integration of an ichnovirus genome segment into the genomic DNA of lepidopteran cells
-
Doucet D, Levasseur A, Beliveau C, Lapointe R, Stoltz D, CussonM. 2007. In vitro integration of an ichnovirus genome segment into the genomic DNA of lepidopteran cells. J Gen Virol. 88:105-113.
-
(2007)
J Gen Virol.
, vol.88
, pp. 105-113
-
-
Doucet, D.1
Levasseur, A.2
Beliveau, C.3
Lapointe, R.4
Stoltz, D.5
Cusson, M.6
-
13
-
-
7444237566
-
The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?
-
Douzery EJ, Snell EA, Bapteste E, Delsuc F, Philippe H. 2004. The timing of eukaryotic evolution: does a relaxed molecular clock reconcile proteins and fossils? Proc Natl Acad Sci U S A. 101:15386-15391.
-
(2004)
Proc Natl Acad Sci U S A.
, vol.101
, pp. 15386-15391
-
-
Douzery, E.J.1
Snell, E.A.2
Bapteste, E.3
Delsuc, F.4
Philippe, H.5
-
14
-
-
34548768028
-
Widespread lateral gene transfer from intracellular bacteria tomulticellular eukaryotes
-
Dunning Hotopp JCD, ClarkME, Oliveira DC, et al. (20 co-authors). 2007. Widespread lateral gene transfer from intracellular bacteria tomulticellular eukaryotes. Science 317:1753-1756.
-
(2007)
Science
, vol.317
, pp. 1753-1756
-
-
Dunning Hotopp, J.C.D.1
Clarkme2
Oliveira, D.C.3
-
15
-
-
79955140811
-
Transfer of a chromosomal maverick to endogenous bracovirus in a parasitoid wasp
-
Dupuy C, Periquet G, Serbielle C, Bezier A, Louis F, Drezen JM. 2011. Transfer of a chromosomal maverick to endogenous bracovirus in a parasitoid wasp. Genetica 139:489-496.
-
(2011)
Genetica
, vol.139
, pp. 489-496
-
-
Dupuy, C.1
Periquet, G.2
Serbielle, C.3
Bezier, A.4
Louis, F.5
Drezen, J.M.6
-
16
-
-
0026096352
-
Larvae of Maculinea rebeli, a large-blue butterfly, and their Myrmica host ants: Wild adoption and behaviour in ant nests
-
Elmes GW, Thomas JA, Wardlaw JC. 1991. Larvae of Maculinea rebeli, a large-blue butterfly, and their Myrmica host ants: wild adoption and behaviour in ant nests. J Zool Lond. 223:447-460.
-
(1991)
J Zool Lond.
, vol.223
, pp. 447-460
-
-
Elmes, G.W.1
Thomas, J.A.2
Wardlaw, J.C.3
-
17
-
-
0000461280
-
Confidence limits on phylogenies: An approach using the bootstrap
-
Felsenstein J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
18
-
-
17844374614
-
DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs
-
Feschotte C, Osterlund MT, Peeler R, Wessler SR. 2005. DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs. Nucleic Acids Res. 33:2153-2165.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 2153-2165
-
-
Feschotte, C.1
Osterlund, M.T.2
Peeler, R.3
Wessler, S.R.4
-
20
-
-
0036094818
-
An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks
-
Gaunt MW, Miles MA. 2002. An insect molecular clock dates the origin of the insects and accords with palaeontological and biogeographic landmarks. Mol Biol Evol. 19:748-761.
-
(2002)
Mol Biol Evol.
, vol.19
, pp. 748-761
-
-
Gaunt, M.W.1
Miles, M.A.2
-
21
-
-
79960906418
-
Insertional engineering of chromosomes with Sleeping Beauty transposition: An overview
-
Grabundzija I, Izsvak Z, Ivics Z. 2011. Insertional engineering of chromosomes with Sleeping Beauty transposition: an overview. Methods Mol Biol. 738:69-85.
-
(2011)
Methods Mol Biol.
, vol.738
, pp. 69-85
-
-
Grabundzija, I.1
Izsvak, Z.2
Ivics, Z.3
-
22
-
-
0038170276
-
Polydnavirus integration in lepidopteran host cells in vitro
-
Gundersen-Rindal DE, Lynn DE. 2003. Polydnavirus integration in lepidopteran host cells in vitro. J Insect Physiol. 49:453-462.
-
(2003)
J Insect Physiol.
, vol.49
, pp. 453-462
-
-
Gundersen-Rindal, D.E.1
Lynn, D.E.2
-
23
-
-
0030903284
-
A newly isolated family of short interspersed repetitive elements (SINEs) in coregonid fishes (whitefish) with sequences that are almost identical to those of the SmaI family of repeats: Possible evidence for the horizontal transfer of SINEs
-
Hamada M, Kido Y, HimbergM, Reist JD, Ying C, HasegawaM, Okada N. 1997. A newly isolated family of short interspersed repetitive elements (SINEs) in coregonid fishes (whitefish) with sequences that are almost identical to those of the SmaI family of repeats: possible evidence for the horizontal transfer of SINEs. Genetics 146: 355-367.
-
(1997)
Genetics
, vol.146
, pp. 355-367
-
-
Hamada, M.1
Kido, Y.2
Himberg, M.3
Reist, J.D.4
Ying, C.5
Hasegawam6
Okada, N.7
-
24
-
-
0031455434
-
Regulation of the transposable element mariner
-
Hartl DL, Lohe AR, Lozovskaya ER. 1997. Regulation of the transposable element mariner. Genetica 100:177-184.
-
(1997)
Genetica
, vol.100
, pp. 177-184
-
-
Hartl, D.L.1
Lohe, A.R.2
Lozovskaya, E.R.3
-
25
-
-
0036210615
-
Aberrant transposition of a Tc1-mariner element, impala, in the fungus Fusarium oxysporum
-
Hua-Van A, Langin T, Daboussi MJ. 2002. Aberrant transposition of a Tc1-mariner element, impala, in the fungus Fusarium oxysporum. Mol Genet Genomics. 267:79-87.
-
(2002)
Mol Genet Genomics.
, vol.267
, pp. 79-87
-
-
Hua-Van, A.1
Langin, T.2
Daboussi, M.J.3
-
26
-
-
0031938514
-
Horizontal escape of the novel Tc1-like lepidopteran transposon TCp3.2 into Cydia pomonella granulovirus
-
Jehle JA, Nickel A, Vlak JM, Backhaus H. 1998. Horizontal escape of the novel Tc1-like lepidopteran transposon TCp3.2 into Cydia pomonella granulovirus. J Mol Evol. 46:215-224.
-
(1998)
J Mol Evol.
, vol.46
, pp. 215-224
-
-
Jehle, J.A.1
Nickel, A.2
Vlak, J.M.3
Backhaus, H.4
-
27
-
-
44649170477
-
Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi
-
Khaldi N, Collemare J, Lebrun MH, Wolfe KH. 2008. Evidence for horizontal transfer of a secondary metabolite gene cluster between fungi. Genome Biol. 24:R18.
-
(2008)
Genome Biol.
, vol.24
-
-
Khaldi, N.1
Collemare, J.2
Lebrun, M.H.3
Wolfe, K.H.4
-
29
-
-
67649396482
-
Transient and stable transgenesis using tol2 transposon vectors
-
Kikuta H, Kawakami K. 2009. Transient and stable transgenesis using tol2 transposon vectors. Methods Mol Biol. 546:69-84.
-
(2009)
Methods Mol Biol.
, vol.546
, pp. 69-84
-
-
Kikuta, H.1
Kawakami, K.2
-
30
-
-
79959772184
-
Size matters: Versatile use of PiggyBac transposons as a genetic manipulation tool
-
Kim A, Pyykko I. 2011. Size matters: versatile use of PiggyBac transposons as a genetic manipulation tool. Mol Cell Biochem. 354:301-309.
-
(2011)
Mol Cell Biochem.
, vol.354
, pp. 301-309
-
-
Kim, A.1
Pyykko, I.2
-
31
-
-
78650470086
-
Recent expansion of a new Ingi-related clade of Vingi non-LTR retrotransposons in hedgehogs
-
Kojima KK, Kapitonov VV, Jurka J. 2011. Recent expansion of a new Ingi-related clade of Vingi non-LTR retrotransposons in hedgehogs. Mol Biol Evol. 28:17-20.
-
(2011)
Mol Biol Evol.
, vol.28
, pp. 17-20
-
-
Kojima, K.K.1
Kapitonov, V.V.2
Jurka, J.3
-
32
-
-
0032168623
-
Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes
-
Kordis D, Gubensek F. 1998. Unusual horizontal transfer of a long interspersed nuclear element between distant vertebrate classes. Proc Natl Acad Sci U S A. 95:10704-10709.
-
(1998)
Proc Natl Acad Sci U S A.
, vol.95
, pp. 10704-10709
-
-
Kordis, D.1
Gubensek, F.2
-
33
-
-
0033290719
-
Horizontal transfer of non-LTR retrotransposons in vertebrates
-
Kordis D, Gubensek F. 1999. Horizontal transfer of non-LTR retrotransposons in vertebrates. Genetica 107:121-128.
-
(1999)
Genetica
, vol.107
, pp. 121-128
-
-
Kordis, D.1
Gubensek, F.2
-
34
-
-
67649845784
-
Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs
-
Kosugi S, Hasebe M, Tomita M, Yanagawa H. 2009. Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs. Proc Natl Acad Sci U S A. 106:10171-10176.
-
(2009)
Proc Natl Acad Sci U S A.
, vol.106
, pp. 10171-10176
-
-
Kosugi, S.1
Hasebe, M.2
Tomita, M.3
Yanagawa, H.4
-
35
-
-
2942744762
-
Molecular diversity and phylogenetic analysis of mariner-like transposons in the genome of the silkworm Bombyx mori
-
Kumaresan G, Mathavan S. 2004. Molecular diversity and phylogenetic analysis of mariner-like transposons in the genome of the silkworm Bombyx mori. Insect Mol Biol. 13:259-271.
-
(2004)
Insect Mol Biol.
, vol.13
, pp. 259-271
-
-
Kumaresan, G.1
Mathavan, S.2
-
36
-
-
0034994201
-
Loss of transposase-DNA interaction may underlie the divergence of mariner family transposable elements and the ability of more than one mariner to occupy the same genome
-
Lampe DJ, Walden KK, Robertson HM. 2001. Loss of transposase-DNA interaction may underlie the divergence of mariner family transposable elements and the ability of more than one mariner to occupy the same genome. Mol Biol Evol. 18:954-961.
-
(2001)
Mol Biol Evol.
, vol.18
, pp. 954-961
-
-
Lampe, D.J.1
Walden, K.K.2
Robertson, H.M.3
-
37
-
-
65649117685
-
DnaSP v5: A software for comprehensive analysis of DNA polymorphism data
-
Librado P, Rozas J. 2009. DnaSP v5: a software for comprehensive analysis of DNA polymorphism data. Bioinformatics 25:1451-1452.
-
(2009)
Bioinformatics
, vol.25
, pp. 1451-1452
-
-
Librado, P.1
Rozas, J.2
-
38
-
-
44349148619
-
Revisiting horizontal transfer of transposable elements in Drosophila
-
Loreto EL, Carareto CM, Capy P. 2008. Revisiting horizontal transfer of transposable elements in Drosophila. Heredity 100:545-554.
-
(2008)
Heredity
, vol.100
, pp. 545-554
-
-
Loreto, E.L.1
Carareto, C.M.2
Capy, P.3
-
39
-
-
40849120757
-
Multiple invasions of Errantivirus in the genus Drosophila
-
Ludwig A, Valente VL, Loreto EL. 2008. Multiple invasions of Errantivirus in the genus Drosophila. Insect Mol Biol. 17:113-124.
-
(2008)
Insect Mol Biol.
, vol.17
, pp. 113-124
-
-
Ludwig, A.1
Valente, V.L.2
Loreto, E.L.3
-
40
-
-
0032976398
-
The age and evolution of non-LTR retrotransposable elements
-
Malik HS, Burke WD, Eickbush TH. 1999. The age and evolution of non-LTR retrotransposable elements. Mol Biol Evol. 16:793-805.
-
(1999)
Mol Biol Evol.
, vol.16
, pp. 793-805
-
-
Malik, H.S.1
Burke, W.D.2
Eickbush, T.H.3
-
41
-
-
0034917751
-
Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses
-
Malik HS, Eickbush TH. 2001. Phylogenetic analysis of ribonuclease H domains suggests a late, chimeric origin of LTR retrotransposable elements and retroviruses. Genome Res. 11:1187-1197.
-
(2001)
Genome Res.
, vol.11
, pp. 1187-1197
-
-
Malik, H.S.1
Eickbush, T.H.2
-
42
-
-
0033799581
-
Poised for contagion: Evolutionary origins of the infectious abilities of invertebrate retroviruses
-
Malik HS, Henikoff S, Eickbush TH. 2000. Poised for contagion: evolutionary origins of the infectious abilities of invertebrate retroviruses. Genome Res. 10:1307-1318.
-
(2000)
Genome Res.
, vol.10
, pp. 1307-1318
-
-
Malik, H.S.1
Henikoff, S.2
Eickbush, T.H.3
-
43
-
-
0035910527
-
Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans
-
Medstrand P, Landry JR, Mager DL. 2001. Long terminal repeats are used as alternative promoters for the endothelin B receptor and apolipoprotein C-I genes in humans. J Biol Chem. 276: 1896-1903.
-
(2001)
J Biol Chem.
, vol.276
, pp. 1896-1903
-
-
Medstrand, P.1
Landry, J.R.2
Mager, D.L.3
-
44
-
-
0019997525
-
A virus mutant with an insertion of a copia-like transposable element
-
Miller DW, Miller LK. 1982. A virus mutant with an insertion of a copia-like transposable element. Nature 299:562-564.
-
(1982)
Nature
, vol.299
, pp. 562-564
-
-
Miller, D.W.1
Miller, L.K.2
-
45
-
-
5144229657
-
The genome sequence of silkworm, Bombyx mori
-
Mita K, Kasahara M, Sasaki S, et al. (21 co-authors). 2004. The genome sequence of silkworm, Bombyx mori. DNA Res. 11:27-35.
-
(2004)
DNA Res.
, vol.11
, pp. 27-35
-
-
Mita, K.1
Kasahara, M.2
Sasaki, S.3
-
47
-
-
0027328291
-
Chloroplast DNA codon use: Evidence for selection at the psb A locus based on tRNA availability
-
Morton BR. 1993. Chloroplast DNA codon use: evidence for selection at the psb A locus based on tRNA availability. J Mol Evol. 37: 273-280.
-
(1993)
J Mol Evol.
, vol.37
, pp. 273-280
-
-
Morton, B.R.1
-
48
-
-
77952604583
-
Harrow: New Drosophila hAT transposons involved in horizontal transfer
-
Mota NR, Ludwig A, Valente VL, Loreto EL. 2010. Harrow: new Drosophila hAT transposons involved in horizontal transfer. Insect Mol Biol. 19:217-228.
-
(2010)
Insect Mol Biol.
, vol.19
, pp. 217-228
-
-
Mota, N.R.1
Ludwig, A.2
Valente, V.L.3
Loreto, E.L.4
-
49
-
-
77950394199
-
DNA transposons: Nature and applications in genomics
-
Munoz-Lopez M, Garcia-Perez JL. 2010. DNA transposons: nature and applications in genomics. Curr Genomics. 11:115-128.
-
(2010)
Curr Genomics.
, vol.11
, pp. 115-128
-
-
Munoz-Lopez, M.1
Garcia-Perez, J.L.2
-
50
-
-
33751005843
-
Phylogeny, historical biogeography, and taxonomic ranking of Parnassiinae (Lepidoptera, Papilionidae) based on morphology and seven genes
-
Nazari V, Zakharov EV, Sperling FA. 2007. Phylogeny, historical biogeography, and taxonomic ranking of Parnassiinae (Lepidoptera, Papilionidae) based on morphology and seven genes. Mol Phylogenet Evol. 42:131-156.
-
(2007)
Mol Phylogenet Evol.
, vol.42
, pp. 131-156
-
-
Nazari, V.1
Zakharov, E.V.2
Sperling, F.A.3
-
51
-
-
33847094575
-
SPODOBASE: An EST database for the lepidopteran crop pest Spodoptera
-
Negre V, Hotelier T, Volkoff AN, et al. (15 co-authors). 2006. SPODOBASE: an EST database for the lepidopteran crop pest Spodoptera. BMC Bioinformatics 7:322.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 322
-
-
Negre, V.1
Hotelier, T.2
Volkoff, A.N.3
-
52
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M, Gojobori T. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol Biol Evol. 3:418-426.
-
(1986)
Mol Biol Evol.
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
54
-
-
34447636067
-
CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission
-
Novikova O, Sliwinska E, Fet V, Settele J, Blinov A, Woyciechowski M. 2007. CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission. BMC Evol Biol. 7:93.
-
(2007)
BMC Evol Biol.
, vol.7
, pp. 93
-
-
Novikova, O.1
Sliwinska, E.2
Fet, V.3
Settele, J.4
Blinov, A.5
Woyciechowski, M.6
-
55
-
-
0035870563
-
A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21
-
Ono R, Kobayashi S, Wagatsuma H, Aisaka K, Kohda T, Kaneko-Ishino T, Ishino F. 2001. A retrotransposon-derived gene, PEG10, is a novel imprinted gene located on human chromosome 7q21. Genomics 73: 232-237.
-
(2001)
Genomics
, vol.73
, pp. 232-237
-
-
Ono, R.1
Kobayashi, S.2
Wagatsuma, H.3
Aisaka, K.4
Kohda, T.5
Kaneko-Ishino, T.6
Ishino, F.7
-
56
-
-
38549138977
-
ButterflyBase: A platform for lepidopteran genomics
-
Papanicolaou A, Gebauer-Jung S, Blaxter ML, Owen McMillanW, Jiggins CD. 2008. ButterflyBase: a platform for lepidopteran genomics. Nucleic Acids Res. 36:D582-D587.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Papanicolaou, A.1
Gebauer-Jung, S.2
Blaxter, M.L.3
Owen, McMillanW.4
Jiggins, C.D.5
-
57
-
-
34547505117
-
Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals
-
Piskurek O, Okada N. 2007. Poxviruses as possible vectors for horizontal transfer of retroposons from reptiles to mammals. Proc Natl Acad Sci U S A. 104:12046-12051.
-
(2007)
Proc Natl Acad Sci U S A.
, vol.104
, pp. 12046-12051
-
-
Piskurek, O.1
Okada, N.2
-
58
-
-
0029687467
-
Codon usage and the origin of P elements
-
Powell JR, Gleason JM. 1996. Codon usage and the origin of P elements. Mol Biol Evol. 13:278-279.
-
(1996)
Mol Biol Evol.
, vol.13
, pp. 278-279
-
-
Powell, J.R.1
Gleason, J.M.2
-
59
-
-
33845645096
-
Intact mariner-like element in tobacco budworm, Heliothis virescens (Lepidoptera: Noctuidae)
-
Ren X, Park Y, Miller TA. 2006. Intact mariner-like element in tobacco budworm, Heliothis virescens (Lepidoptera: Noctuidae). Insect Mol Biol. 6:743-748.
-
(2006)
Insect Mol Biol.
, vol.6
, pp. 743-748
-
-
Ren, X.1
Park, Y.2
Miller, T.A.3
-
60
-
-
69949175105
-
Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi
-
Richards TA, Soanes DM, Foster PG, Leonard G, Thornton CR, Talbot NJ. 2009. Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi. Plant Cell. 21:1897-1911.
-
(2009)
Plant Cell.
, vol.21
, pp. 1897-1911
-
-
Richards, T.A.1
Soanes, D.M.2
Foster, P.G.3
Leonard, G.4
Thornton, C.R.5
Talbot, N.J.6
-
61
-
-
0027398902
-
The mariner transposable element is widespread in insects
-
Robertson HM. 1993. The mariner transposable element is widespread in insects. Nature 362:241-245.
-
(1993)
Nature
, vol.362
, pp. 241-245
-
-
Robertson, H.M.1
-
62
-
-
0030240416
-
Bmmar1: A basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori
-
Robertson HM, Asplund ML. 1996. Bmmar1: a basal lineage of the mariner family of transposable elements in the silkworm moth, Bombyx mori. Insect Biochem Mol Biol. 26:945-954.
-
(1996)
Insect Biochem Mol Biol.
, vol.26
, pp. 945-954
-
-
Robertson, H.M.1
Asplund, M.L.2
-
63
-
-
0029099904
-
Recent horizontal transfer of a mariner transposable element among and between Diptera and Neuroptera
-
Robertson HM, Lamp DJ. 1995. Recent horizontal transfer of a mariner transposable element among and between Diptera and Neuroptera. Mol Biol Evol. 12:850-862.
-
(1995)
Mol Biol Evol.
, vol.12
, pp. 850-862
-
-
Robertson, H.M.1
Lamp, D.J.2
-
64
-
-
0037385761
-
Bmmar6, a second mori subfamily mariner transposon from the silkworm moth Bombyx mori
-
Robertson HM, Walden KK. 2003. Bmmar6, a second mori subfamily mariner transposon from the silkworm moth Bombyx mori. Insect Mol Biol. 12:167-171.
-
(2003)
Insect Mol Biol.
, vol.12
, pp. 167-171
-
-
Robertson, H.M.1
Walden, K.K.2
-
65
-
-
70350401596
-
Automatic classification within families of transposable elements: Application to the mariner Family
-
Rouault JD, Casse N, Chenais B, Hua-Van A, Filee J, Capy P. 2009. Automatic classification within families of transposable elements: application to the mariner Family. Gene 448:227-232.
-
(2009)
Gene
, vol.448
, pp. 227-232
-
-
Rouault, J.D.1
Casse, N.2
Chenais, B.3
Hua-Van, A.4
Filee, J.5
Capy, P.6
-
66
-
-
84863181640
-
Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus
-
doi: 10.1073/pnas.1116168109
-
Routh A, Domitrovic T, Johnson JE. Forthcoming 2012. Host RNAs, including transposons, are encapsidated by a eukaryotic single-stranded RNA virus. PNAS doi: 10.1073/pnas.1116168109.
-
(2012)
PNAS
-
-
Routh, A.1
Domitrovic, T.2
Forthcoming, E.J.J.3
-
68
-
-
15244341492
-
High rate of horizontal transfer of transposable elements in Drosophila
-
Sanchez-Gracia A, Maside X, Charlesworth B. 2005. High rate of horizontal transfer of transposable elements in Drosophila. Trends Genet. 21:200-203.
-
(2005)
Trends Genet.
, vol.21
, pp. 200-203
-
-
Sanchez-Gracia, A.1
Maside, X.2
Charlesworth, B.3
-
69
-
-
0038610809
-
Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis
-
Sasakura Y, Awazu S, Chiba S, Satoh N. 2003. Germ-line transgenesis of the Tc1/mariner superfamily transposon Minos in Ciona intestinalis. Proc Natl Acad Sci U S A. 100:7726-7730.
-
(2003)
Proc Natl Acad Sci U S A.
, vol.100
, pp. 7726-7730
-
-
Sasakura, Y.1
Awazu, S.2
Chiba, S.3
Satoh, N.4
-
70
-
-
77955658052
-
Promiscuous DNA: Horizontal transfer of transposable elements and why it matters for eukaryotic evolution
-
Schaack S, Gilbert C, Feschotte C. 2010. Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution. Trends Ecol Evol. 25:537-546.
-
(2010)
Trends Ecol Evol.
, vol.25
, pp. 537-546
-
-
Schaack, S.1
Gilbert, C.2
Feschotte, C.3
-
71
-
-
0024974812
-
Evidence that mutation patterns vary among Drosophila transposable elements
-
Shields DC, Sharp PM. 1989. Evidence that mutation patterns vary among Drosophila transposable elements. J Mol Biol. 207:843-846.
-
(1989)
J Mol Biol.
, vol.207
, pp. 843-846
-
-
Shields, D.C.1
Sharp, P.M.2
-
72
-
-
0033804947
-
Horizontal transfer and selection in the evolution of P elements
-
Silva JC, Kidwell MG. 2000. Horizontal transfer and selection in the evolution of P elements. Mol Biol Evol. 17:1542-1557.
-
(2000)
Mol Biol Evol.
, vol.17
, pp. 1542-1557
-
-
Silva, J.C.1
Kidwell, M.G.2
-
73
-
-
10844287250
-
Evolution of P elements in natural populations of Drosophila willistoni and D
-
Silva JC, Kidwell MG. 2004. Evolution of P elements in natural populations of Drosophila willistoni and D. sturtevanti. Genetics 168: 1323-1335.
-
(2004)
Sturtevanti. Genetics
, vol.168
, pp. 1323-1335
-
-
Silva, J.C.1
Kidwell, M.G.2
-
74
-
-
0344876091
-
Factors that affect the horizontal transfer of transposable elements
-
Silva JC, Loreto EL, Clark JB. 2004. Factors that affect the horizontal transfer of transposable elements. Curr Issues Mol Biol. 6:57-71.
-
(2004)
Curr Issues Mol Biol.
, vol.6
, pp. 57-71
-
-
Silva, J.C.1
Loreto, E.L.2
Clark, J.B.3
-
75
-
-
41549141861
-
Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: A phylogenetic study
-
Slot JC, Hibbett DS. 2007. Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. PLoS One. 2:e1097.
-
(2007)
PLoS One.
, vol.2
-
-
Slot, J.C.1
Hibbett, D.S.2
-
76
-
-
79151477225
-
Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi
-
Slot JC, Rokas A. 2011. Horizontal transfer of a large and highly toxic secondary metabolic gene cluster between fungi. Curr Biol. 21: 134-139.
-
(2011)
Curr Biol.
, vol.21
, pp. 134-139
-
-
Slot, J.C.1
Rokas, A.2
-
77
-
-
0030002075
-
Characterization of species-specifically amplified SINEs in three salmonid species-chum salmon, pink salmon, and kokanee: The local environment of the genome may be important for the generation of a dominant source gene at a newly retroposed locus
-
Takasaki N, Park L, Kaeriyama M, Gharrett AJ, Okada N. 1996. Characterization of species-specifically amplified SINEs in three salmonid species-chum salmon, pink salmon, and kokanee: the local environment of the genome may be important for the generation of a dominant source gene at a newly retroposed locus. J Mol Evol. 42: 103-116.
-
(1996)
J Mol Evol.
, vol.42
, pp. 103-116
-
-
Takasaki, N.1
Park, L.2
Kaeriyama, M.3
Gharrett, A.J.4
Okada, N.5
-
78
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol Biol Evol. 28:2731-2739.
-
(2011)
Mol Biol Evol.
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
79
-
-
0021580906
-
The behaviour and habitat requirements of Maculinea nausithous (the Dusky Large Blue butterfly) and M. teleius (the Scarce Large Blue) in France
-
Thomas JA. 1984. The behaviour and habitat requirements of Maculinea nausithous (the Dusky Large Blue butterfly) and M. teleius (the Scarce Large Blue) in France. Biol Conserv. 28:325-347.
-
(1984)
Biol Conserv.
, vol.28
, pp. 325-347
-
-
Thomas, J.A.1
-
80
-
-
77958487981
-
Pervasive horizontal transfer of rolling-circle transposons among animals
-
Thomas J, Schaack S, Pritham EJ. 2010. Pervasive horizontal transfer of rolling-circle transposons among animals. Genome Biol Evol. 2: 656-664.
-
(2010)
Genome Biol Evol.
, vol.2
, pp. 656-664
-
-
Thomas, J.1
Schaack, S.2
Pritham, E.J.3
-
81
-
-
0027968068
-
CLUSTALW: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson JD, Higgins DG, Gibson TJ. 1994. CLUSTALW: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
82
-
-
0033745895
-
Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes
-
Volff JN, Korting C, Schartl M. 2000. Multiple lineages of the non-LTR retrotransposon Rex1 with varying success in invading fish genomes. Mol Biol Evol. 17:1673-1684.
-
(2000)
Mol Biol Evol.
, vol.17
, pp. 1673-1684
-
-
Volff, J.N.1
Korting, C.2
Schartl, M.3
-
83
-
-
12344286187
-
A functional screen identifies lateral transfer of beta-glucuronidase (gus) from bacteria to fungi
-
Wenzl P,Wong L, Kwang-won K, Jefferson RA. 2005. A functional screen identifies lateral transfer of beta-glucuronidase (gus) from bacteria to fungi. Mol Biol Evol. 22:308-316.
-
(2005)
Mol Biol Evol.
, vol.22
, pp. 308-316
-
-
Wenzl, P.1
Wong, L.2
Kwang-Won, K.3
Jefferson, R.A.4
-
84
-
-
33745418904
-
Polymorphic growth in larvae of Maculinea butterflies, as an example of biennialism in myrmecophilous insect
-
Witek M, Sliwinska EB, Skorka P, Nowicki P,Woyciechowski M, Settele J. 2006. Polymorphic growth in larvae of Maculinea butterflies, as an example of biennialism in myrmecophilous insect. Oecologia 148: 729-733.
-
(2006)
Oecologia
, vol.148
, pp. 729-733
-
-
Witek, M.1
Sliwinska, E.B.2
Skorka, P.3
Nowicki, P.4
Woyciechowski, M.5
Settele, J.6
-
85
-
-
0025318864
-
The "effective number of codons" used in a gene
-
Wright F. 1990. The "effective number of codons" used in a gene. Gene 87:23-29.
-
(1990)
Gene
, vol.87
, pp. 23-29
-
-
Wright, F.1
-
86
-
-
10344265019
-
A draft sequence for the genome of the domesticated silkworm (Bombyx mori)
-
Xia Q, Zhou Z, Lu C, et al. (93 co-authors). 2004. A draft sequence for the genome of the domesticated silkworm (Bombyx mori). Science 306: 1937-1940.
-
(2004)
Science
, vol.306
, pp. 1937-1940
-
-
Xia, Q.1
Zhou, Z.2
Lu, C.3
-
87
-
-
0034804523
-
Possible horizontal transfer of a transposable element from host to parasitoid
-
Yoshiyama M, Tu Z, Kainoh Y, Honda H, Shono T, Kimura K. 2001. Possible horizontal transfer of a transposable element from host to parasitoid. Mol Biol Evol. 18:1952-1958.
-
(2001)
Mol Biol Evol.
, vol.18
, pp. 1952-1958
-
-
Yoshiyama, M.1
Tu, Z.2
Kainoh, Y.3
Honda, H.4
Shono, T.5
Kimura, K.6
-
88
-
-
77449156754
-
High-level genomic integration, epigenetic changes, and expression of Sleeping Beauty transgene
-
Zhu J, Park CW, Sjeklocha L, Kren BT, Steer CJ. 2010. High-level genomic integration, epigenetic changes, and expression of Sleeping Beauty transgene. Biochemistry 49:1507-1521.
-
(2010)
Biochemistry
, vol.49
, pp. 1507-1521
-
-
Zhu, J.1
Park, C.W.2
Sjeklocha, L.3
Kren, B.T.4
Steer, C.J.5
-
89
-
-
0034809990
-
Evolutionary dynamics and evolutionary history in the RTE clade of non-LTR retrotransposons
-
Zupunski V, Gubensek F, Kordis D. 2001. Evolutionary dynamics and evolutionary history in the RTE clade of non-LTR retrotransposons. Mol Biol Evol. 18:1849-1863.
-
(2001)
Mol Biol Evol.
, vol.18
, pp. 1849-1863
-
-
Zupunski, V.1
Gubensek, F.2
Kordis, D.3
|