Development of a simple and rapid protocol for the production of customized intertypic recombinant polioviruses

Journal of Virological Methods

Volumn 186, Issue 1-2, 2012, Pages 104-108

  Bessaud, Maël ^a,b   Delpeyroux, Francis ^a,b  

^a INSTITUT PASTEUR   (France)

^b INSERM   (France)

Author keywords

Chimeric genome; Enterovirus; Fusion PCR; Recombination; Sabin strain; Vaccine derived poliovirus

Indexed keywords

VIRUS DNA;

AMINO ACID SUBSTITUTION; ARTICLE; CONTROLLED STUDY; ENTEROVIRUS; GENE DELETION; GENE INSERTION; GENETIC ENGINEERING; GENETIC TRANSFECTION; HUMAN; HUMAN CELL; IN VITRO STUDY; MOLECULAR CLONING; NONHUMAN; PHENOTYPE; PILOT STUDY; POLIOMYELITIS VIRUS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PROCESS OPTIMIZATION; VIROGENESIS; VIRUS GENOME; VIRUS RECOMBINANT; VIRUS RECOMBINATION; VIRUS STRAIN;

HUMANS; MOLECULAR BIOLOGY; POLIOVIRUS; POLYMERASE CHAIN REACTION; RECOMBINATION, GENETIC; TIME FACTORS; TRANSFECTION; VIROLOGY;

ENTEROVIRUS; POLIOVIRUS;

EID: 84869039686     PISSN: 01660934     EISSN: 18790984     Source Type: Journal    
DOI: 10.1016/j.jviromet.2012.08.001     Document Type: Article

References (29)

1. Bernstein H.D., Sarnow P., Baltimore D. Genetic complementation among poliovirus mutants derived from an infectious cDNA clone. Journal of Virology 1986, 60:1040-1049.
2. Bessaud M., Joffret M.L., Holmblat B., Razafindratsimandresy R., Delpeyroux F. Genetic relationship between cocirculating human enteroviruses species C. PLoS ONE 2011, 6:e24823.
3. Brown D.M., Cornell C.T., Tran G.P., Nguyen J.H.C., Semler B.L. An authentic 3' noncoding region is necessary for efficient poliovirus replication. Journal of Virology 2005, 79:11962-11973.
4. Buchholz U.J., Finke S., Conzelmann K.K. Generation of bovine respiratory syncytial virus (BRSV) from cDNA: BRSV NS2 is not essential for virus replication in tissue culture, and the human RSV leader region acts as a functional BRSV genome promoter. Journal of Virology 1999, 73:251-259.
5. Charlier N., Molenkamp R., Leyssen P., Vandamme A.M., De Clercq E., Bredenbeek P., Neyts J. A rapid and convenient variant of fusion-PCR to construct chimeric flaviviruses. Journal of Virological Methods 2003, 108:67-74.
6. Combelas N., Holmblat B., Joffret M.L., Colbere-Garapin F., Delpeyroux F. Recombination between poliovirus and coxsackie A viruses of species C: a model of viral genetic plasticity and emergence. Viruses 2011, 3:1460-1484.
7. Crotty S., Lohman B.L., Lu F.X., Tang S., Miller C.J., Andino R. Mucosal immunization of cynomolgus macaques with two serotypes of live poliovirus vectors expressing simian immunodeficiency virus antigens: stimulation of humoral, mucosal, and cellular immunity. Journal of Virology 1999, 73:9485-9495.
8. Dekker A., Leendertse C.H., van Poelwijk F., Rebel J.M., Moormann R.J. Chimeric swine vesicular disease viruses produced by fusion PCR: a new method for epitope mapping. Journal of Virological Methods 2000, 86:131-141.
9. Gritsun T.S., Gould E.A. Infectious transcripts of tick-borne encephalitis virus, generated in days by RT-PCR. Virology 1995, 214:611-618.
10. Hofmann M.A. Construction of an infectious chimeric classical swine fever virus containing the 5'UTR of bovine viral diarrhea virus, and its application as a universal internal positive control in real-time RT-PCR. Journal of Virological Methods 2003, 114:77-90.
11. Horton R.M., Hunt H.D., Ho S.N., Pullen J.K., Pease L.R. Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extension. Gene 1989, 77:61-68.
12. Jegouic S., Joffret M.L., Blanchard C., Riquet F.B., Perret C., Pelletier I., Colbere-Garapin F., Rakoto-Andrianarivelo M., Delpeyroux F. Recombination between polioviruses and co-circulating Coxsackie A viruses: role in the emergence of pathogenic vaccine-derived polioviruses. PLoS Pathogens 2009, 5:e1000412.
13. Karreman C. Fusion PCR, a one-step variant of the megaprimer method of mutagenesis. Biotechniques 1998, 24:736. 740, 742.
14. Kew O.M., Sutter R.W., de Gourville E.M., Dowdle W.R., Pallansch M.A. Vaccine-derived polioviruses and the endgame strategy for global polio eradication. Annual Review of Microbiology 2005, 59:587-635.
15. Kuge S., Nomoto A. Construction of viable deletion and insertion mutants of the Sabin strain of type 1 poliovirus: function of the 5' noncoding sequence in viral replication. Journal of Virology 1987, 61:1478-1487.
16. Maeda J., Takagi H., Hashimoto S., Kurane I., Maeda A. A PCR-based protocol for generating West Nile virus replicons. Journal of Virological Methods 2008, 148:244-252.
17. Racaniello V.R. One hundred years of poliovirus pathogenesis. Virology 2006, 344:9-16.
18. Racaniello V.R. Picornaviridae: the viruses and their replication. Fields Virology 2007, 795-838. Wolters Kluwer/Lippincott Williams & Wilkins, Philadelphia. D.M. Knipe (Ed.).
19. Rakoto-Andrianarivelo M., Guillot S., Iber J., Balanant J., Blondel B., Riquet F., Martin J., Kew O., Randriamanalina B., Razafinimpiasa L., Rousset D., Delpeyroux F. Co-circulation and evolution of polioviruses and species C enteroviruses in a district of Madagascar. PLoS Pathogens 2007, 3:e191.
20. Rebel J.M., Leendertse C.H., Dekker A., van Poelwijk F., Moormann R.J. Construction of a full-length infectious cDNA clone of swine vesicular disease virus strain NET/1/92 and analysis of new antigenic variants derived from it. Journal of General Virology 2000, 81:2763-2769.
21. Riquet F.B., Blanchard C., Jegouic S., Balanant J., Guillot S., Vibet M.A., Rakoto-Andrianarivelo M., Delpeyroux F. Impact of exogenous sequences on the characteristics of an epidemic type 2 recombinant vaccine-derived poliovirus. Journal of Virology 2008, 82:8927-8932.
22. Starkey M., Elaswarapu R. Reverse transcription. Genomics: Essential Methods 2011, 130-133. John Wiley & Sons, Chichester. Wiley-Blackwell (Ed.).
23. Terpe K. Overview of tag protein fusions: from molecular and biochemical fundamentals to commercial systems. Applied Microbiology and Biotechnology 2003, 60:523-533.
24. Teterina N.L., Pinto Y., Weaver J.D., Jensen K.S., Ehrenfeld E. Analysis of poliovirus protein 3A interactions with viral and cellular proteins in infected cells. Journal of Virology 2011, 85:4284-4296.
25. van Gennip H.G., van Rijn P.A., Widjojoatmodjo M.N., Moormann R.J. Recovery of infectious classical swine fever virus (CSFV) from full-length genomic cDNA clones by a swine kidney cell line expressing bacteriophage T7 RNA polymerase. Journal of Virological Methods 1999, 78:117-128.
26. Wang H.L., Postier B.L., Burnap R.L. Optimization of fusion PCR for in vitro construction of gene knockout fragments. Biotechniques 2002, 33:26-32.
27. Yanagiya A., Ohka S., Hashida N., Okamura M., Taya C., Kamoshita N., Iwasaki K., Sasaki Y., Yonekawa H., Nomoto A. Tissue-specific replicating capacity of a chimeric poliovirus that carries the internal ribosome entry site of hepatitis C virus in a new mouse model transgenic for the human poliovirus receptor. Journal of Virology 2003, 77:10479-10487.
28. Yunus M.A., Chung L.M., Chaudhry Y., Bailey D., Goodfellow I. Development of an optimized RNA-based murine norovirus reverse genetics system. Journal of Virological Methods 2010, 169:112-118.
29. Zheng H., Tian H., Jin Y., Wu J., Shang Y., Yin S., Liu X., Xie Q. Development of a hamster kidney cell line expressing stably T7 RNA polymerase using retroviral gene transfer technology for efficient rescue of infectious foot-and-mouth disease virus. Journal of Virological Methods 2009, 156:129-137.