Novel interaction of two clock-relevant RNA-binding proteins C3 and XRN1 in Chlamydomonas reinhardtii

FEBS Letters

Volumn 586, Issue 22, 2012, Pages 3969-3973

  Dathe, Hannes ^a   Prager, Katja ^a   Mittag, Maria ^a  

^a FRIEDRICH SCHILLER UNIVERSITY JENA   (Germany)

Author keywords

Chlamydomonas reinhardtii; Circadian clock; RNA metabolism

Indexed keywords

COMPLEMENTARY DNA; EXORIBONUCLEASE; EXORIBONUCLEASE 1; RNA BINDING PROTEIN; RNA BINDING PROTEIN CHLAMY1 C3; UNCLASSIFIED DRUG;

ARTICLE; CHLAMY1 GENE; CHLAMYDOMONAS REINHARDTII; CIRCADIAN RHYTHM; CONTROLLED STUDY; ENVIRONMENTAL TEMPERATURE; GENE; GENE FUNCTION; GENE INTERACTION; GENE REGULATORY NETWORK; IMMUNOPRECIPITATION; KNOCKOUT MOUSE; MICROBIAL GROWTH; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN DEGRADATION; PROTEIN FUNCTION; PROTEIN PROTEIN INTERACTION; RNA BINDING; RNA METABOLISM; TWO HYBRID SYSTEM; XRN1 GENE;

ALGAL PROTEINS; BASE SEQUENCE; CHLAMYDOMONAS REINHARDTII; CIRCADIAN CLOCKS; CIRCADIAN RHYTHM; CYSTEINE PROTEINASE INHIBITORS; EXONUCLEASES; GENE KNOCKOUT TECHNIQUES; IMMUNOBLOTTING; LEUPEPTINS; MOLECULAR SEQUENCE DATA; MUTATION; PROTEASOME ENDOPEPTIDASE COMPLEX; PROTEIN BINDING; PROTEIN SUBUNITS; PROTEOLYSIS; RNA; RNA-BINDING PROTEINS; SIGNAL TRANSDUCTION; TEMPERATURE; TWO-HYBRID SYSTEM TECHNIQUES;

CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA;

EID: 84868588250     PISSN: 00145793     EISSN: 18733468     Source Type: Journal    
DOI: 10.1016/j.febslet.2012.09.046     Document Type: Article

References (23)

1. L. Rensing, and P. Ruoff Temperature effect on entrainment, phase shifting, and amplitude of circadian clocks and its molecular bases Chronobiol. Int. 19 2002 807 864
2. B. Zhao, C. Schneid, D. Iliev, E.M. Schmidt, V. Wagner, F. Wollnik, and M. Mittag The circadian RNA-binding protein CHLAMY1 represents a novel type heteromer of RNA recognition motif and lysine homology containing subunits Eukaryot. Cell 3 2004 815 825
3. T. Schulze, K. Prager, H. Dathe, J. Kelm, P. Kießling, and M. Mittag How the green alga Chlamydomonas reinhardtii keeps time Protoplasma 244 2010 3 14
4. D. Iliev, O. Voytsekh, E.M. Schmidt, M. Fiedler, A. Nykytenko, and M. Mittag A heteromeric RNA-binding protein is involved in maintaining acrophase and period of the circadian clock Plant Physiol. 142 2006 797 806
5. O. Voytsekh, S.B. Seitz, D. Iliev, and M. Mittag Both subunits of the circadian RNA-binding protein CHLAMY1 can integrate temperature information Plant Physiol. 147 2008 2179 2193
6. S.B. Seitz, W. Weisheit, and M. Mittag Multiple roles and interaction factors of an E-box element in Chlamydomonas reinhardtii Plant Physiol. 152 2010 2243 2257
7. B. Beel, K. Prager, M. Spexard, S. Sasso, D. Weiss, N. Müller, M. Heinnickel, D. Dewez, D. Ikoma, A.R. Grossman, T. Kottke, and M. Mittag A flavin-binding cryptochrome photoreceptor responds to both blue and red light in Chlamydomonas reinhardtii Plant Cell 24 2012 2992 3008
8. M. Mittag Conserved circadian elements in phylogenetically diverse algae Proc. Natl. Acad. Sci. USA 93 1996 14401 14404
9. H. Waltenberger, C. Schneid, J.O. Grosch, A. Bareiß, and M. Mittag Identification of target mRNAs from C. reinhardtii for the clock controlled RNA-binding protein Chlamy1 Mol. Genet. Genomics 265 2001 180 188
10. T. Matsuo, K. Okamoto, K. Onai, Y. Niwa, K. Shimogawara, and M. Ishiura A systematic forward genetic analysis identified components of the Chlamydomonas circadian system Genes Dev. 22 2008 918 930
11. T. Matsuo, and M. Ishiura Chlamydomonas reinhardtii as a new model system for studying the molecular basis of the circadian clock FEBS Lett. 585 2011 1495 1502
12. M. Kulkarni, S. Ozgur, and G. Stoecklin On track with P-bodies Biochem. Soc. Trans. 38 2010 242 251
13. J. Uniacke, and W. Zerges Stress induces the assembly of RNA granules in the chloroplast of Chlamydomonas reinhardtii J. Cell Biol. 182 2008 641 646
14. R.D. Gietz, and R.A. Woods Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method Methods Enzymol. 30 2002 87 96
15. R.M. Dent, C.M. Haglund, B.L. Chin, M.C. Kobayashi, and K.K. Niyogi Functional genomics of eukaryotic photosynthesis using insertional mutagenesis of Chlamydomonas reinhardtii Plant Physiol. 137 2005 545 556
16. D.H. Lee, M. Mittag, S. Sczekan, D. Morse, and J.W. Hastings Molecular cloning and genomic organization of a gene for luciferin-binding protein from the dinoflagellate Gonyaulax polyedra J. Biol. Chem. 268 1993 8842 8850
17. P. James, J. Halladay, and E.A. Craig Genomic libraries and a host strain designed for highly efficient two-hybrid selection in yeast Genetics 144 1996 1425 1436
18. S. Kojima, D.L. Shingle, and C.B. Green Post-transcriptional control of circadian rhythms J. Cell Sci. 124 2011 311 320
19. D. Staiger, and R. Green RNA-based regulation in the plant circadian clock Trends Plant Sci. 16 2011 517 523
20. C. Streitner, L. Hennig, C. Korneli, and D. Staiger Global transcript profiling of transgenetic plants constitutively overexpressing the RNA-binding protein AtGRP7 BMC Plant Biol. 10 2010 221
21. M. Shi, M. Collett, J.J. Loros, and J.C. Dunlap FRQ-interacting RNA helicase mediates negative and positive feedback in the Neurospora circadian clock Genetics 184 2010 351 361
22. V. Sundram, F.S. Ng, M.A. Roberts, C. Millán, J. Ewer, and F.R. Jackson Cellular requirements for LARK in the Drosophila circadian system J. Biol. Rhythms 27 2012 183 195
23. S. Kiaulehn, O. Voytsekh, M. Fuhrmann, and M. Mittag The presence of UG-repeat sequences in the 3′-UTRs of reporter luciferase mRNAs mediates circadian expression and can determine acrophase in Chlamydomonas reinhardtii J. Biol. Rhythms 22 2007 275 277