A revision of the genus Cyclophora and description of Astrosyne gen. nov. (Bacillariophyta), two genera with the pyrenoids contained within pseudosepta

Phycologia

Volumn 51, Issue 6, 2012, Pages 684-699

  Ashworth, Matt P ^a   Ruck, Elizabeth C ^a   Lobban, Christopher S ^b   Romanovicz, Dwight K ^a   Theriot, Edward C ^a  

^a UNIVERSITY OF TEXAS AT AUSTIN   (United States)

^b UNIVERSITY OF GUAM   (Guam)

Author keywords

Diatoms; Phylogeny; Pyrenoids; TEM; Ultrastructure

Indexed keywords

BACILLARIOPHYTA; CYCLOPHORA (BACILLARIOPHYTA); CYCLOPHORA TENUIS; FRAGILARIOPHYCEAE; RADIATA;

EID: 84868582094     PISSN: 00318884     EISSN: None     Source Type: Journal    
DOI: 10.2216/12-004.1     Document Type: Article

References (42)

1. ALVERSON A.J., CANNONE J.J., GUTELL R.R. & THERIOT E.C. 2006. The evolution of elongate shape in diatoms. Journal of Phycology, 42: 655-668. (Pubitemid 43810111)
2. ANONYMOUS. 1975. Proposal for a standardization of diatom terminology and diagnoses. Nova Hedwigia Beihefte 53: 323-354.
3. BEDOSHVILI Y.D., POPKOVA T.P. & LIKHOSHWAY Y.V. 2009. Chloroplast structure of diatoms of different classes. Cell and Tissue Biology 3: 297-310.
4. CASTRACANE F. 1878. Nuovo genere e specie di Diatomea. Atti dell'Accademia Pontificia de'Nuovi Lincei, 31, pp. 1-11.
5. CASTRACANE F. 1886. Report on the Scientific Results of the Voyage of H. M. S. Challenger During the Years 1873-76: Botany, vol. 2, 178 pp., 30 pl. Her Majesty's Stationery Office, London.
6. CRAWFORD R., SIMONSEN R., HINZ F. & GARDNER C. 1993. The diatoms Hustedtiella baltica and H. sinuata sp. nov. and the systematic position of the genus. Nova Hedwigia Beihefte 106: 151-160.
7. DREBES G. & SCHULTZ D. 1981. Anaulus creticus sp. nov., a new centric diatom from the Mediterranean Sea. Bacillaria 4: 161-176.
8. GREVILLE R.K. 1863. Descriptions of new and rare diatoms. Series IX. Transactions of the Microscopical Society of London 11: 63- 76, pls IV-V.
9. GUILLARD R.R.L. 1975. Culture of phytoplankton for feeding marine invertebrates. In: Culture of marine invertebrate animals (Ed. by W.L. Smith & M.H. Chanley), pp. 26-60. Plenum Press, New York.
10. HUSTEDT F. 1931. Die Kieselalgen Deutschlands, österreichs und der Schweiz. In Rabenhorst's Kryptogamenflora, Band 7, Teil 2, Lief. 1, pp 1-176. Johnson Reprint, New York, 1962.
11. KOOISTRA W.H.C.F., DE STEFANO M., MANN D.G., SALMA N. & MEDLIN L.K. 2003. Phylogenetic position of Toxarium, a pennatelike lineage within centric diatoms (Bacillariophyceae). Journal of Phycology 39: 185-197. (Pubitemid 36229978)
12. KOOISTRA W.H.C.F, FORLANI G., STERRENBURG F.A.S. & DE STEFANO M. 2004. Molecular phylogeny and morphology of the marine diatom Talaroneis posidoniae gen. et sp. nov. (Bacillariophyta) advocate the return of the Plagiogrammaceae to the pennate diatoms. Phycologia 43: 58-67. (Pubitemid 38184866)
13. LOBBAN C.S. & JORDAN R.W. 2010. Diatoms on coral reefs and in tropical marine lakes. In: The diatoms: Applications for the environmental and earth sciences, ed. 2. (Ed. by J.P. Smol & E.F. Stoermer), p. 346-356. Cambridge University Press, Cambridge, UK.
14. LOBBAN C.S., ASHWORTH M.P. & THERIOT E.C. 2010. Climaconeis species (Bacillariophyceae: Berkeleyaceae) from western Pacific islands, including C. petersonii sp. nov. and C. guamensis sp. nov., with emphasis on the plastids. European Journal of Phycology 45: 293-307.
15. LOBBAN C.S., ASHWORTH M.P., ARAI Y., JORDAN R.W. & THERIOT E.C. 2011. Marine necklace-chain Fragilariaceae (Bacillariophyceae) from Guam, including descriptions of Koernerella and Perideraion, genera nova. Phycological Research 59: 174-193.
16. MADDISON W.P. & MADDISON D.R. 2010. Mesquite: a modular system for evolutionary analysis. Version 2.74. Available at: http://mesquiteproject.org (Downloaded 30 October 2010).
17. MAGNE F. 1976. Quelques caractères cytologiques particuliers du Bachelotia antillarum (Ph'eophyc'ees, Ectocarpales). Phycologia 15: 309-319.
18. MCKAY R.M.L. & GIBBS S.P. 1991. Composition and function of pyrenoids: cytochemical and immunochemical approaches. Canadian Journal of Botany 69: 1040-1052.
19. MEDLIN L.K., SATO S., MANN D.G. & KOOISTRA W.H.C.F. 2008. Molecular evidence confirms sister relationship of Ardissonea, Climacosphenia and Toxarium within the bipolar centric diatoms (Bacillariophyta, Mediophyceae), and cladistic analyses confirm that extremely elongate shape has arisen twice in the diatoms. Journal of Phycology 45: 1340-1348.
20. MERESCHKOWSKY C. 1901. Etjudy nad endokhromom diatomovykh vodoroslei (po frants). (́ Etude sur l'endochrome des Diatoḿees.) I. Zapiski Imperatorskoj Akademii Nauk po Fiziko-matematiceskomee Otdeleniju. Memoires de l'academie imperiale des sciences de Saint Petersbourg, Classe physico-mathematique Series 8, 11(6):1-40, 7 pl.
21. MüLLER O. 1886. Die Zwischenbänder und Septen der Bacillariaceen. Berichte der Deutsche Botanisches Gesellschaft. 6: 306-316.
22. NAVARRO J.N. 1982. A survey of the marine diatoms of Puerto Rico. IV. Suborder Araphidinae: Families Diatomaceae and Protoraphidaceae. Botanica Marina 25: 247-263.
23. NAVARRO J.N. 1996. New observations on the araphid marine diatom Florella portoricensis (Florellaceae fam. Nov.). Diatom Research 11: 207-304.
24. NAVARRO J.N. 2002. Florella pascuensis sp. nov., a new marine diatom species from Easter Island (Isla de Pascua), Chile. Diatom Research 17: 283-289. (Pubitemid 35465045)
25. NAVARRO J.N. & LOBBAN C.S. 2009. Freshwater and marine diatoms from the western Pacific islands of Yap and Guam, with notes on some diatoms in damselfish territories. Diatom Research 24: 123- 157.
26. OKADA M. 1992. Recent studies on the composition and the activity of algal pyrenoids. Progress in Phycological Research 8: 117-138.
27. ØSTRUP E. 1904. Marine diatoms. In: Flora of Koh Chang. Contributions to the knowledge of the vegetation in the Gulf of Siam by Johs. Schmidt. Part VIII. Botanisk Tidsskrift 26(1):115- 161, pls. 1 and 2.
28. OURIQUES L.C. & BOUZON Z.L. 2000. Stellate chloroplast organization in Asteronema breviarticulatum comb. nov. (Ectocarpales, Phaeophyta). Phycologia 39: 267-271.
29. PERAGALLO H. & PERAGALLO M. 1897-1908. Diatoḿees marines de France et des districts maritimes voisins. M.J. Tempère, Grez-sur- Loing. 492 pp.
30. ROUND F.E. & MANN D.G. 1980. Psammodiscus nov. gen. based on Coscinodiscus nitidus. Annals of Botany 46: 368-373.
31. ROUND F.E., CRAWFORD R.M. & MANN D.G. 1990. The diatoms: biology and morphology of the genera. Cambridge University Press, Cambridge, UK. 747 pp.
32. SCHMID A.-M.M. 2001. Value of pyrenoids in the systematics of the diatoms: their morphology and ultrastructure. In: Proceedings of the 16th International Diatom Symposium. (Ed. by A. Economou- Amilli), pp. 1-32. Amvrosiou Press, Athens, Greece.
33. SIMONSEN R. 1979. The diatom system: ideas on phylogeny. Bacillaria 2: 9-71.
34. STAMATAKIS A. 2006. RaxML-VI-HPC; Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. (Pubitemid 44642609)
35. STRELNIKOVA N.I., FOURTANIER E., KOCIOLEK J.P. & BARRON, J.A. 2004. A SEM study of the diatom genus Porodiscus Greville: morphology of the species and comparison with related genera. Proceedings of the California Academy of Sciences 55: 300-337.
36. THERIOT E.C., ASHWORTH M., RUCK E., NAKOV T. & JANSEN, R.K. 2010. A preliminary multigene phylogeny of the diatoms (Bacillariophyta): challenges for future research. Plant Ecology and Evolution 143: 1-18.
37. THERIOT E.C., RUCK E., ASHWORTH M., NAKOV T. & JANSEN R.K. 2011. Status of the pursuit of the diatom phylogeny. In: The diatom world. (Ed. by J. Seckbach & J.P. Kociolek), pp. 119-142. Springer Science-Business Media Springer, New York, NY.
38. VAN HEURCK H. 1880-1885. Synopsis des Diatoḿees de Belgique. Jucaju & Cie, Anvers.
39. VAN HEURCK H. 1896. A treatise on the Diatomaceae. Wesley & Son, London, UK.
40. VON STOSCH H.A. 1975. An amended terminology of the diatom girdle. Nova Hedwigia Beihefte 53: 1-36.
41. WALNE P.A., MOESTRUP Ø., NORRIS R. & ETTL H. 1986. Light and electron microscopical studies of Eutreptiella eupharynea sp. nov. (Euglenophyceae) from Danish and American waters. Phycologia 25: 109-126.
42. WILGENBUSCH J.C., WARREN D.L. & SWOFFORD D.L. 2004. AWTY: A system for graphical exploration of MCMC convergence in Bayesian phylogenetic inference. Available at: http://ceb.csit.fsu.edu/awty (accessed 15 November 2011).