메뉴 건너뛰기




Volumn 194, Issue 20, 2012, Pages 5699-5700

Complete genome sequence of Amycolatopsis mediterranei S699 based on de novo assembly via a combinatorial sequencing strategy

Author keywords

[No Author keywords available]

Indexed keywords

AMINOTRANSFERASE; RIFAMYCIN B;

EID: 84868529483     PISSN: 00219193     EISSN: 10985530     Source Type: Journal    
DOI: 10.1128/JB.01295-12     Document Type: Note
Times cited : (14)

References (14)
  • 1
    • 13144258781 scopus 로고    scopus 로고
    • Biosynthesis of the ansamycin antibiotic rifamycin: deductions from the molecular analysis of the rif biosynthetic gene cluster of Amycolatopsis mediterranei S699
    • August PR, et al. 1998. Biosynthesis of the ansamycin antibiotic rifamycin: deductions from the molecular analysis of the rif biosynthetic gene cluster of Amycolatopsis mediterranei S699. Chem. Biol. 5:69-79.
    • (1998) Chem. Biol. , vol.5 , pp. 69-79
    • August, P.R.1
  • 4
    • 0034129404 scopus 로고    scopus 로고
    • Thioesterases and the premature termina tion of polyketide chain elongation in rifamycin B biosynthesis by Amycolatopsis mediterranei S699
    • Tokyo
    • Doi-Katayama Y, et al. 2000. Thioesterases and the premature termina tion of polyketide chain elongation in rifamycin B biosynthesis by Amycolatopsis mediterranei S699. J. Antibiot. (Tokyo) 53:484-495.
    • (2000) J. Antibiot. , vol.53 , pp. 484-495
    • Doi-Katayama, Y.1
  • 5
    • 0026637288 scopus 로고
    • Formation of 3-amino-5-hydroxybenzoic acid, the precursor of mC7N units in ansamycin antibiotics, by a new variant of the shikimate pathway
    • Kim CG, et al. 1992. Formation of 3-amino-5-hydroxybenzoic acid, the precursor of mC7N units in ansamycin antibiotics, by a new variant of the shikimate pathway. J. Am. Chem. Soc. 114:4941-4943.
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 4941-4943
    • Kim, C.G.1
  • 6
    • 0028944860 scopus 로고
    • Rifamycins: strain improvement program
    • Lal R, et al. 1995. Rifamycins: strain improvement program. Crit. Rev. Microbiol. 21:19-30.
    • (1995) Crit. Rev. Microbiol. , vol.21 , pp. 19-30
    • Lal, R.1
  • 7
    • 0032519353 scopus 로고    scopus 로고
    • GeneMark.hmm: new solutions for gene finding
    • Lukashin AV, Borodovsky M. 1998. GeneMark.hmm: new solutions for gene finding. Nucleic Acids Res. 26:1107-1115.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1107-1115
    • Lukashin, A.V.1    Borodovsky, M.2
  • 8
    • 0001103068 scopus 로고
    • Rifomycin. XI. taxonomic study on Streptomyces mediterranei nov. sp.
    • Margalith P, Beretta G. 1960. Rifomycin. XI. taxonomic study on Streptomyces mediterranei nov. sp. Mycopathol. Mycol. Appl. 13:321-330.
    • (1960) Mycopathol. Mycol. Appl. , vol.13 , pp. 321-330
    • Margalith, P.1    Beretta, G.2
  • 9
    • 0001516155 scopus 로고
    • Rifomycin. XIV. Production of rifomycin
    • Margalith P, Pagani H. 1961. Rifomycin. XIV. Production of rifomycin B. Appl. Microbiol. 9:325-334.
    • (1961) B. Appl. Microbiol. , vol.9 , pp. 325-334
    • Margalith, P.1    Pagani, H.2
  • 10
    • 80053606115 scopus 로고    scopus 로고
    • Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699
    • Verma M, et al. 2011. Whole genome sequence of the rifamycin B-producing strain Amycolatopsis mediterranei S699. J. Bacteriol. 193:5562-5563.
    • (2011) J. Bacteriol. , vol.193 , pp. 5562-5563
    • Verma, M.1
  • 11
    • 0016304519 scopus 로고
    • Ansamycin biogenesis: studies on a novel rifamycin isolated from a mutant strain of Nocardia mediterranei
    • U. S. A.
    • White RJ, Martinelli E, Lancini G. 1974. Ansamycin biogenesis: studies on a novel rifamycin isolated from a mutant strain of Nocardia mediterranei. Proc. Natl. Acad. Sci. U. S. A. 71:3260-3264.
    • (1974) Proc. Natl. Acad. Sci. , vol.71 , pp. 3260-3264
    • White, R.J.1    Martinelli, E.2    Lancini, G.3
  • 12
    • 23844557104 scopus 로고    scopus 로고
    • Identification of tailoring genes involved in the modification of the polyketide backbone of rifamycin B by Amycolatopsis mediterranei S699
    • Xu J, Wan E, Kim CJ, Floss HG, Mahmud T. 2005. Identification of tailoring genes involved in the modification of the polyketide backbone of rifamycin B by Amycolatopsis mediterranei S699. Microbiology 151:2515-2528.
    • (2005) Microbiology , vol.151 , pp. 2515-2528
    • Xu, J.1    Wan, E.2    Kim, C.J.3    Floss, H.G.4    Mahmud, T.5
  • 13
    • 82255164179 scopus 로고    scopus 로고
    • Two genes, rif15 and rif16, of the rifamycin biosynthetic gene cluster in Amycolatopsis mediterranei likely encode a transketolase and a P450 monooxygenase, respectively, both essential for the conversion of rifamycin SV into
    • Yuan H, et al. 2011. Two genes, rif15 and rif16, of the rifamycin biosynthetic gene cluster in Amycolatopsis mediterranei likely encode a transketolase and a P450 monooxygenase, respectively, both essential for the conversion of rifamycin SV into B. Acta Biochim. Biophys. Sin. 43:948-956.
    • (2011) B. Acta Biochim. Biophys. Sin. , vol.43 , pp. 948-956
    • Yuan, H.1
  • 14
    • 77957601090 scopus 로고    scopus 로고
    • Complete genome sequence of the rifamycin SVproducing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism
    • Zhao W, et al. 2010. Complete genome sequence of the rifamycin SVproducing Amycolatopsis mediterranei U32 revealed its genetic characteristics in phylogeny and metabolism. Cell Res. 20:1096-1108.
    • (2010) Cell Res. , vol.20 , pp. 1096-1108
    • Zhao, W.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.