-
1
-
-
0035106351
-
Large-scale analysis of the yeast proteome by multidimensional protein identification technology
-
10.1038/85686, 11231557
-
Washburn M, Wolters D, Yates III J. Large-scale analysis of the yeast proteome by multidimensional protein identification technology. Nat Biotechnol 2001, 19(3):242-247. 10.1038/85686, 11231557.
-
(2001)
Nat Biotechnol
, vol.19
, Issue.3
, pp. 242-247
-
-
Washburn, M.1
Wolters, D.2
Yates III, J.3
-
2
-
-
0037435030
-
Mass spectrometry-based proteomics
-
10.1038/nature01511, 12634793
-
Aebersold R, Mann M. Mass spectrometry-based proteomics. Nature 2003, 422(6928):198-207. 10.1038/nature01511, 12634793.
-
(2003)
Nature
, vol.422
, Issue.6928
, pp. 198-207
-
-
Aebersold, R.1
Mann, M.2
-
3
-
-
27644555055
-
Interpretation of shotgun proteomic data
-
10.1074/mcp.R500012-MCP200, 16009968
-
Nesvizhskii A, Aebersold R. Interpretation of shotgun proteomic data. Mol Cell Proteomics 2005, 4(10):1419-1440. 10.1074/mcp.R500012-MCP200, 16009968.
-
(2005)
Mol Cell Proteomics
, vol.4
, Issue.10
, pp. 1419-1440
-
-
Nesvizhskii, A.1
Aebersold, R.2
-
4
-
-
84865783204
-
Protein inference: a review
-
Huang T, Wang J, Yu W, He Z. Protein inference: a review. Briefings Bioinf 2012, 13(5):586-614.
-
(2012)
Briefings Bioinf
, vol.13
, Issue.5
, pp. 586-614
-
-
Huang, T.1
Wang, J.2
Yu, W.3
He, Z.4
-
5
-
-
0042338362
-
A statistical model for identifying proteins by tandem mass spectrometry
-
10.1021/ac0341261, 14632076
-
Nesvizhskii A, Keller A, Kolker E, Aebersold R. A statistical model for identifying proteins by tandem mass spectrometry. Anal Chem 2003, 75(17):4646-4658. 10.1021/ac0341261, 14632076.
-
(2003)
Anal Chem
, vol.75
, Issue.17
, pp. 4646-4658
-
-
Nesvizhskii, A.1
Keller, A.2
Kolker, E.3
Aebersold, R.4
-
6
-
-
79959930601
-
IsoformResolver: A peptide-centric algorithm for protein inference
-
10.1021/pr200039p, 3167374, 21599010
-
Meyer-Arendt K, Old W, Houel S, Renganathan K, Eichelberger B, Resing K, Ahn N. IsoformResolver: A peptide-centric algorithm for protein inference. J Proteome Res 2011, 10(7):3060-3075. 10.1021/pr200039p, 3167374, 21599010.
-
(2011)
J Proteome Res
, vol.10
, Issue.7
, pp. 3060-3075
-
-
Meyer-Arendt, K.1
Old, W.2
Houel, S.3
Renganathan, K.4
Eichelberger, B.5
Resing, K.6
Ahn, N.7
-
7
-
-
70149084269
-
Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function
-
10.1101/gr.089060.108, 2765272, 19546170
-
Grobei M, Qeli E, Brunner E, Rehrauer H, Zhang R, Roschitzki B, Basler K, Ahrens C, Grossniklaus U. Deterministic protein inference for shotgun proteomics data provides new insights into Arabidopsis pollen development and function. Genome Res 2009, 19(10):1786-1800. 10.1101/gr.089060.108, 2765272, 19546170.
-
(2009)
Genome Res
, vol.19
, Issue.10
, pp. 1786-1800
-
-
Grobei, M.1
Qeli, E.2
Brunner, E.3
Rehrauer, H.4
Zhang, R.5
Roschitzki, B.6
Basler, K.7
Ahrens, C.8
Grossniklaus, U.9
-
8
-
-
77954502710
-
PeptideClassifier for protein inference and targeted quantitative proteomics
-
10.1038/nbt0710-647, 20622826
-
Qeli E, Ahrens C. PeptideClassifier for protein inference and targeted quantitative proteomics. Nat Biotechnol 2010, 28(7):647-650. 10.1038/nbt0710-647, 20622826.
-
(2010)
Nat Biotechnol
, vol.28
, Issue.7
, pp. 647-650
-
-
Qeli, E.1
Ahrens, C.2
-
9
-
-
31644446949
-
Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition
-
Silva J, Gorenstein M, Li G, Vissers J, Geromanos S. Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition. Mol Cell Proteomics 2006, 5(1):144-156.
-
(2006)
Mol Cell Proteomics
, vol.5
, Issue.1
, pp. 144-156
-
-
Silva, J.1
Gorenstein, M.2
Li, G.3
Vissers, J.4
Geromanos, S.5
-
10
-
-
84859868686
-
The mzIdentML data standard for mass spectrometry-based proteomics results
-
10.1074/mcp.M111.014381, 3394945, 22375074
-
Jones A, Eisenacher M, Mayer G, Kohlbacher O, Siepen J, Hubbard S, Selley J, Searle B, Shofstahl J, Seymour S, et al. The mzIdentML data standard for mass spectrometry-based proteomics results. Mol Cell Proteomics 2012, 11(7):M111.014381. 10.1074/mcp.M111.014381, 3394945, 22375074.
-
(2012)
Mol Cell Proteomics
, vol.11
, Issue.7
-
-
Jones, A.1
Eisenacher, M.2
Mayer, G.3
Kohlbacher, O.4
Siepen, J.5
Hubbard, S.6
Selley, J.7
Searle, B.8
Shofstahl, J.9
Seymour, S.10
-
11
-
-
63049084861
-
The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS
-
10.1002/pmic.200800562, 19294628
-
Geromanos S, Vissers J, Silva J, Dorschel C, Li G, Gorenstein M, Bateman R, Langridge J. The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS. Proteomics 2009, 9(6):1683-1695. 10.1002/pmic.200800562, 19294628.
-
(2009)
Proteomics
, vol.9
, Issue.6
, pp. 1683-1695
-
-
Geromanos, S.1
Vissers, J.2
Silva, J.3
Dorschel, C.4
Li, G.5
Gorenstein, M.6
Bateman, R.7
Langridge, J.8
-
12
-
-
63049138916
-
Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures
-
10.1002/pmic.200800564, 19294629
-
Li G, Vissers J, Silva J, Golick D, Gorenstein M, Geromanos S. Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures. Proteomics 2009, 9(6):1696-1719. 10.1002/pmic.200800564, 19294629.
-
(2009)
Proteomics
, vol.9
, Issue.6
, pp. 1696-1719
-
-
Li, G.1
Vissers, J.2
Silva, J.3
Golick, D.4
Gorenstein, M.5
Geromanos, S.6
|