-
1
-
-
14244272868
-
PHENIX: building new software for automated crystallographic structure determination
-
Adams P.D., Grosse-Kunstleve R.W., Hung L.W., Ioerger T.R., McCoy A.J., Moriarty N.W., Read R.J., Sacchettini J.C., Sauter N.K., Terwilliger T.C. PHENIX: building new software for automated crystallographic structure determination. Acta Crystallogr. D Biol. Crystallogr. 2002, 58:1948-1954.
-
(2002)
Acta Crystallogr. D Biol. Crystallogr.
, vol.58
, pp. 1948-1954
-
-
Adams, P.D.1
Grosse-Kunstleve, R.W.2
Hung, L.W.3
Ioerger, T.R.4
McCoy, A.J.5
Moriarty, N.W.6
Read, R.J.7
Sacchettini, J.C.8
Sauter, N.K.9
Terwilliger, T.C.10
-
2
-
-
0033667089
-
Xanthomonas oryzae pv. oryzae avirulence genes contribute differently and specifically to pathogen aggressiveness
-
Bai J., Choi S.H., Ponciano G., Leung H., Leach J.E. Xanthomonas oryzae pv. oryzae avirulence genes contribute differently and specifically to pathogen aggressiveness. Mol. Plant Microbe Interact. 2000, 13:1322-1329.
-
(2000)
Mol. Plant Microbe Interact.
, vol.13
, pp. 1322-1329
-
-
Bai, J.1
Choi, S.H.2
Ponciano, G.3
Leung, H.4
Leach, J.E.5
-
3
-
-
43049136539
-
Strand transfer events during HIV-1 reverse transcription
-
Basu V.P., Song M., Gao L., Rigby S.T., Hanson M.N., Bambara R.A. Strand transfer events during HIV-1 reverse transcription. Virus Res. 2008, 134:19-38.
-
(2008)
Virus Res.
, vol.134
, pp. 19-38
-
-
Basu, V.P.1
Song, M.2
Gao, L.3
Rigby, S.T.4
Hanson, M.N.5
Bambara, R.A.6
-
4
-
-
77956126894
-
Xanthomonas AvrBs3 family-type III effectors: discovery and function
-
Boch J., Bonas U. Xanthomonas AvrBs3 family-type III effectors: discovery and function. Annu. Rev. Phytopathol. 2010, 48:419-436.
-
(2010)
Annu. Rev. Phytopathol.
, vol.48
, pp. 419-436
-
-
Boch, J.1
Bonas, U.2
-
5
-
-
72149110399
-
Breaking the code of DNA binding specificity of TAL-type III effectors
-
Boch J., Scholze H., Schornack S., Landgraf A., Hahn S., Kay S., Lahaye T., Nickstadt A., Bonas U. Breaking the code of DNA binding specificity of TAL-type III effectors. Science 2009, 326:1509-1512.
-
(2009)
Science
, vol.326
, pp. 1509-1512
-
-
Boch, J.1
Scholze, H.2
Schornack, S.3
Landgraf, A.4
Hahn, S.5
Kay, S.6
Lahaye, T.7
Nickstadt, A.8
Bonas, U.9
-
6
-
-
80053343092
-
TAL effectors: customizable proteins for DNA targeting
-
Bogdanove A.J., Voytas D.F. TAL effectors: customizable proteins for DNA targeting. Science 2011, 333:1843-1846.
-
(2011)
Science
, vol.333
, pp. 1843-1846
-
-
Bogdanove, A.J.1
Voytas, D.F.2
-
7
-
-
0027264020
-
Resistance in tomato to Xanthomonas campestris pv vesicatoria is determined by alleles of the pepper-specific avirulence gene avrBs3
-
Bonas U., Conrads-Strauch J., Balbo I. Resistance in tomato to Xanthomonas campestris pv vesicatoria is determined by alleles of the pepper-specific avirulence gene avrBs3. Mol. Gen. Genet. 1993, 238:261-269.
-
(1993)
Mol. Gen. Genet.
, vol.238
, pp. 261-269
-
-
Bonas, U.1
Conrads-Strauch, J.2
Balbo, I.3
-
8
-
-
78951479577
-
Targeting DNA double-strand breaks with TAL effector nucleases
-
Christian M., Cermak T., Doyle E.L., Schmidt C., Zhang F., Hummel A., Bogdanove A.J., Voytas D.F. Targeting DNA double-strand breaks with TAL effector nucleases. Genetics 2010, 186:757-761.
-
(2010)
Genetics
, vol.186
, pp. 757-761
-
-
Christian, M.1
Cermak, T.2
Doyle, E.L.3
Schmidt, C.4
Zhang, F.5
Hummel, A.6
Bogdanove, A.J.7
Voytas, D.F.8
-
9
-
-
0028103275
-
The CCP4 suite: programs for protein crystallography
-
Collaborative Computational Project, Number 4
-
The CCP4 suite: programs for protein crystallography. Acta Crystallogr. D Biol. Crystallogr. 1994, 50:760-763. Collaborative Computational Project, Number 4.
-
(1994)
Acta Crystallogr. D Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
10
-
-
84876049442
-
-
The PyMOL Molecular Graphics System. on World Wide Web
-
DeLano, W.L. (2002). The PyMOL Molecular Graphics System. on World Wide Web. http://www.pymol.org.
-
(2002)
-
-
DeLano, W.L.1
-
11
-
-
84857032466
-
Structural basis for sequence-specific recognition of DNA by TAL effectors
-
Deng D., Yan C., Pan X., Mahfouz M., Wang J., Zhu J.K., Shi Y., Yan N. Structural basis for sequence-specific recognition of DNA by TAL effectors. Science 2012, 335:720-723.
-
(2012)
Science
, vol.335
, pp. 720-723
-
-
Deng, D.1
Yan, C.2
Pan, X.3
Mahfouz, M.4
Wang, J.5
Zhu, J.K.6
Shi, Y.7
Yan, N.8
-
12
-
-
84867095660
-
Recognition of methylated DNA by TAL effectors
-
Published Septmeber 4, 2012
-
Deng D., Yin P., Yan C., Pan X., Gong X., Qi S., Xie T., Mahfouz M., Zhu J.K., Yan N., Shi Y. Recognition of methylated DNA by TAL effectors. Cell Res. 2012, Published Septmeber 4, 2012. 10.1038/cr.2012.127.
-
(2012)
Cell Res.
-
-
Deng, D.1
Yin, P.2
Yan, C.3
Pan, X.4
Gong, X.5
Qi, S.6
Xie, T.7
Mahfouz, M.8
Zhu, J.K.9
Yan, N.10
Shi, Y.11
-
14
-
-
21344468875
-
R gene expression induced by a type-III effector triggers disease resistance in rice
-
Gu K., Yang B., Tian D., Wu L., Wang D., Sreekala C., Yang F., Chu Z., Wang G.L., White F.F., Yin Z. R gene expression induced by a type-III effector triggers disease resistance in rice. Nature 2005, 435:1122-1125.
-
(2005)
Nature
, vol.435
, pp. 1122-1125
-
-
Gu, K.1
Yang, B.2
Tian, D.3
Wu, L.4
Wang, D.5
Sreekala, C.6
Yang, F.7
Chu, Z.8
Wang, G.L.9
White, F.F.10
Yin, Z.11
-
15
-
-
0032488608
-
Solution structures of DNA. RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes
-
Gyi J.I., Lane A.N., Conn G.L., Brown T. Solution structures of DNA. RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes. Biochemistry 1998, 37:73-80.
-
(1998)
Biochemistry
, vol.37
, pp. 73-80
-
-
Gyi, J.I.1
Lane, A.N.2
Conn, G.L.3
Brown, T.4
-
16
-
-
32944467057
-
Post-crystallization treatments for improving diffraction quality of protein crystals
-
Heras B., Martin J.L. Post-crystallization treatments for improving diffraction quality of protein crystals. Acta Crystallogr. D Biol. Crystallogr. 2005, 61:1173-1180.
-
(2005)
Acta Crystallogr. D Biol. Crystallogr.
, vol.61
, pp. 1173-1180
-
-
Heras, B.1
Martin, J.L.2
-
17
-
-
79960836456
-
Genetic engineering of human pluripotent cells using TALE nucleases
-
Hockemeyer D., Wang H., Kiani S., Lai C.S., Gao Q., Cassady J.P., Cost G.J., Zhang L., Santiago Y., Miller J.C., et al. Genetic engineering of human pluripotent cells using TALE nucleases. Nat. Biotechnol. 2011, 29:731-734.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 731-734
-
-
Hockemeyer, D.1
Wang, H.2
Kiani, S.3
Lai, C.S.4
Gao, Q.5
Cassady, J.P.6
Cost, G.J.7
Zhang, L.8
Santiago, Y.9
Miller, J.C.10
-
18
-
-
79961185942
-
Heritable gene targeting in zebrafish using customized TALENs
-
Huang P., Xiao A., Zhou M., Zhu Z., Lin S., Zhang B. Heritable gene targeting in zebrafish using customized TALENs. Nat. Biotechnol. 2011, 29:699-700.
-
(2011)
Nat. Biotechnol.
, vol.29
, pp. 699-700
-
-
Huang, P.1
Xiao, A.2
Zhou, M.3
Zhu, Z.4
Lin, S.5
Zhang, B.6
-
19
-
-
35548942766
-
A bacterial effector acts as a plant transcription factor and induces a cell size regulator
-
Kay S., Hahn S., Marois E., Hause G., Bonas U. A bacterial effector acts as a plant transcription factor and induces a cell size regulator. Science 2007, 318:648-651.
-
(2007)
Science
, vol.318
, pp. 648-651
-
-
Kay, S.1
Hahn, S.2
Marois, E.3
Hause, G.4
Bonas, U.5
-
20
-
-
0038947196
-
Site-specific cleavage of DNA-RNA hybrids by zinc finger/FokI cleavage domain fusions
-
Kim Y.G., Shi Y., Berg J.M., Chandrasegaran S. Site-specific cleavage of DNA-RNA hybrids by zinc finger/FokI cleavage domain fusions. Gene 1997, 203:43-49.
-
(1997)
Gene
, vol.203
, pp. 43-49
-
-
Kim, Y.G.1
Shi, Y.2
Berg, J.M.3
Chandrasegaran, S.4
-
21
-
-
79952302385
-
De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks
-
Mahfouz M.M., Li L., Shamimuzzaman M., Wibowo A., Fang X., Zhu J.K. De novo-engineered transcription activator-like effector (TALE) hybrid nuclease with novel DNA binding specificity creates double-strand breaks. Proc. Natl. Acad. Sci. USA 2011, 108:2623-2628.
-
(2011)
Proc. Natl. Acad. Sci. USA
, vol.108
, pp. 2623-2628
-
-
Mahfouz, M.M.1
Li, L.2
Shamimuzzaman, M.3
Wibowo, A.4
Fang, X.5
Zhu, J.K.6
-
23
-
-
34447508216
-
Phaser crystallographic software
-
McCoy A.J., Grosse-Kunstleve R.W., Adams P.D., Winn M.D., Storoni L.C., Read R.J. Phaser crystallographic software. J. Appl. Cryst. 2007, 40:658-674.
-
(2007)
J. Appl. Cryst.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
24
-
-
84856430123
-
Gene editing: not just for translation anymore
-
McMahon M.A., Rahdar M., Porteus M. Gene editing: not just for translation anymore. Nat. Methods 2012, 9:28-31.
-
(2012)
Nat. Methods
, vol.9
, pp. 28-31
-
-
McMahon, M.A.1
Rahdar, M.2
Porteus, M.3
-
25
-
-
72149090954
-
A simple cipher governs DNA recognition by TAL effectors
-
Moscou M.J., Bogdanove A.J. A simple cipher governs DNA recognition by TAL effectors. Science 2009, 326:1501.
-
(2009)
Science
, vol.326
, pp. 1501
-
-
Moscou, M.J.1
Bogdanove, A.J.2
-
26
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997, 276:307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
27
-
-
84860747716
-
FLASH assembly of TALENs for high-throughput genome editing
-
Reyon D., Tsai S.Q., Khayter C., Foden J.A., Sander J.D., Joung J.K. FLASH assembly of TALENs for high-throughput genome editing. Nat. Biotechnol. 2012, 30:460-465.
-
(2012)
Nat. Biotechnol.
, vol.30
, pp. 460-465
-
-
Reyon, D.1
Tsai, S.Q.2
Khayter, C.3
Foden, J.A.4
Sander, J.D.5
Joung, J.K.6
-
28
-
-
35548939950
-
Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene
-
Romer P., Hahn S., Jordan T., Strauss T., Bonas U., Lahaye T. Plant pathogen recognition mediated by promoter activation of the pepper Bs3 resistance gene. Science 2007, 318:645-648.
-
(2007)
Science
, vol.318
, pp. 645-648
-
-
Romer, P.1
Hahn, S.2
Jordan, T.3
Strauss, T.4
Bonas, U.5
Lahaye, T.6
-
29
-
-
58149133507
-
Structure and function of HIV-1 reverse transcriptase: molecular mechanisms of polymerization and inhibition
-
Sarafianos S.G., Marchand B., Das K., Himmel D.M., Parniak M.A., Hughes S.H., Arnold E. Structure and function of HIV-1 reverse transcriptase: molecular mechanisms of polymerization and inhibition. J. Mol. Biol. 2009, 385:693-713.
-
(2009)
J. Mol. Biol.
, vol.385
, pp. 693-713
-
-
Sarafianos, S.G.1
Marchand, B.2
Das, K.3
Himmel, D.M.4
Parniak, M.A.5
Hughes, S.H.6
Arnold, E.7
-
30
-
-
45849138859
-
Recognition of the unique structure of DNA:RNA hybrids
-
Shaw N.N., Arya D.P. Recognition of the unique structure of DNA:RNA hybrids. Biochimie 2008, 90:1026-1039.
-
(2008)
Biochimie
, vol.90
, pp. 1026-1039
-
-
Shaw, N.N.1
Arya, D.P.2
-
31
-
-
0028956789
-
Specific DNA-RNA hybrid binding by zinc finger proteins
-
Shi Y., Berg J.M. Specific DNA-RNA hybrid binding by zinc finger proteins. Science 1995, 268:282-284.
-
(1995)
Science
, vol.268
, pp. 282-284
-
-
Shi, Y.1
Berg, J.M.2
-
32
-
-
0026865950
-
An Xanthomonas citri pathogenicity gene, pthA, pleiotropically encodes gratuitous avirulence on nonhosts
-
Swarup S., Yang Y., Kingsley M.T., Gabriel D.W. An Xanthomonas citri pathogenicity gene, pthA, pleiotropically encodes gratuitous avirulence on nonhosts. Mol. Plant Microbe Interact. 1992, 5:204-213.
-
(1992)
Mol. Plant Microbe Interact.
, vol.5
, pp. 204-213
-
-
Swarup, S.1
Yang, Y.2
Kingsley, M.T.3
Gabriel, D.W.4
-
33
-
-
77955648999
-
HIV-1 RT-associated RNase H function inhibitors: Recent advances in drug development
-
Tramontano E., Di Santo R. HIV-1 RT-associated RNase H function inhibitors: Recent advances in drug development. Curr. Med. Chem. 2010, 17:2837-2853.
-
(2010)
Curr. Med. Chem.
, vol.17
, pp. 2837-2853
-
-
Tramontano, E.1
Di Santo, R.2
-
34
-
-
68249134135
-
Host and pathogen factors controlling the rice-Xanthomonas oryzae interaction
-
White F.F., Yang B. Host and pathogen factors controlling the rice-Xanthomonas oryzae interaction. Plant Physiol. 2009, 150:1677-1686.
-
(2009)
Plant Physiol.
, vol.150
, pp. 1677-1686
-
-
White, F.F.1
Yang, B.2
-
35
-
-
79960558872
-
Targeted genome editing across species using ZFNs and TALENs
-
Wood A.J., Lo T.W., Zeitler B., Pickle C.S., Ralston E.J., Lee A.H., Amora R., Miller J.C., Leung E., Meng X., et al. Targeted genome editing across species using ZFNs and TALENs. Science 2011, 333:307.
-
(2011)
Science
, vol.333
, pp. 307
-
-
Wood, A.J.1
Lo, T.W.2
Zeitler, B.3
Pickle, C.S.4
Ralston, E.J.5
Lee, A.H.6
Amora, R.7
Miller, J.C.8
Leung, E.9
Meng, X.10
|