-
1
-
-
82955233761
-
Grapevine leafroll-associated virus 1 occurs as genetically diverse populations
-
Alabi, O.J., Al Rwahnih, M., Karthikeyan, G., Poojari, S., Fuchs, M., Rowhani, A. and Naidu, R.A. (2011) Grapevine leafroll-associated virus 1 occurs as genetically diverse populations. Phytopathology, 101, 1446-1456.
-
(2011)
Phytopathology
, vol.101
, pp. 1446-1456
-
-
Alabi, O.J.1
Al Rwahnih, M.2
Karthikeyan, G.3
Poojari, S.4
Fuchs, M.5
Rowhani, A.6
Naidu, R.A.7
-
2
-
-
64849095739
-
Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus
-
Al Rwahnih, M., Daubert, S., Golino, D. and Rowhani, A. (2009) Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus. Virology, 387, 395-401.
-
(2009)
Virology
, vol.387
, pp. 395-401
-
-
Al Rwahnih, M.1
Daubert, S.2
Golino, D.3
Rowhani, A.4
-
3
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S.F., Gish, W., Miller, W., Myers, E.W. and Lipman, D.J. (1990) Basic local alignment search tool. Mol. Biol. 215, 403-410.
-
(1990)
Mol. Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
4
-
-
0347444723
-
MicroRNAs: genomics, biogenesis, mechanism, and function
-
Bartel, D.P. (2004) MicroRNAs: genomics, biogenesis, mechanism, and function. Cell, 116, 281-297.
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
5
-
-
34547542489
-
Infection and coaccumulation of Tobacco mosaic virus proteins alter microRNA levels, correlating with symptom and plant development
-
Bazzini, A.A., Hopp, H.E., Beachy, R.N. and Asurmendi, S. (2007) Infection and coaccumulation of Tobacco mosaic virus proteins alter microRNA levels, correlating with symptom and plant development. Proc. Natl. Acad. Sci. USA, 104, 12157-12162.
-
(2007)
Proc. Natl. Acad. Sci. USA
, vol.104
, pp. 12157-12162
-
-
Bazzini, A.A.1
Hopp, H.E.2
Beachy, R.N.3
Asurmendi, S.4
-
6
-
-
75649118953
-
Virus infection elevates transcriptional activity of miR164a promoter in plants
-
Bazzini, A.A., Almasia, N.I., Manacorda, C.A., Mongelli, V.C., Conti, G., Maroniche, G.A., Rodriguez, M.C., Distéfano, A.J., Hopp, H.E., Vas, M. and Asurmendi, S. (2009) Virus infection elevates transcriptional activity of miR164a promoter in plants. BMC Plant Biol. 9, 152.
-
(2009)
BMC Plant Biol.
, vol.9
, pp. 152
-
-
Bazzini, A.A.1
Almasia, N.I.2
Manacorda, C.A.3
Mongelli, V.C.4
Conti, G.5
Maroniche, G.A.6
Rodriguez, M.C.7
Distéfano, A.J.8
Hopp, H.E.9
Vas, M.10
Asurmendi, S.11
-
7
-
-
77649154330
-
In-depth sequencing of the siRNAs associated with Peach latent mosaic viroid infection
-
Bolduc, F., Hoareau, C., St-Pierre, P. and Perreault, J. (2010) In-depth sequencing of the siRNAs associated with Peach latent mosaic viroid infection. BMC Mol. Biol. 11, 16.
-
(2010)
BMC Mol. Biol.
, vol.11
, pp. 16
-
-
Bolduc, F.1
Hoareau, C.2
St-Pierre, P.3
Perreault, J.4
-
8
-
-
69249188390
-
Parentage of Merlot and related winegrape cultivars of southwestern France: discovery of the missing link
-
Boursiquot, J., Lacombe, T., Laucou, V., Julliard, S., Perrin, F., Lanier, N., Legrand, D., Meredith, C. and This, P. (2009) Parentage of Merlot and related winegrape cultivars of southwestern France: discovery of the missing link. Aust. J. Grape Wine Res. 15, 144-155.
-
(2009)
Aust. J. Grape Wine Res.
, vol.15
, pp. 144-155
-
-
Boursiquot, J.1
Lacombe, T.2
Laucou, V.3
Julliard, S.4
Perrin, F.5
Lanier, N.6
Legrand, D.7
Meredith, C.8
This, P.9
-
9
-
-
79955708454
-
Viral suppressors of RNA silencing
-
Burgyán, J. and Havelda, Z. (2011) Viral suppressors of RNA silencing. Trends Plant Sci. 16, 265-272.
-
(2011)
Trends Plant Sci.
, vol.16
, pp. 265-272
-
-
Burgyán, J.1
Havelda, Z.2
-
10
-
-
64149097786
-
The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments
-
Bustin, S.A., Benes, V., Garson, J.A., Hellemans, J., Huggett, J., Kubista, M., Mueller, R., Nolan, T., Pfaffl, M.W., Shipley, G.L., Vandesompele, J. and Wittwer, C.T. (2009) The MIQE guidelines: minimum information for publication of quantitative real-time PCR experiments. Clin. Chem. 55, 611-622.
-
(2009)
Clin. Chem.
, vol.55
, pp. 611-622
-
-
Bustin, S.A.1
Benes, V.2
Garson, J.A.3
Hellemans, J.4
Huggett, J.5
Kubista, M.6
Mueller, R.7
Nolan, T.8
Pfaffl, M.W.9
Shipley, G.L.10
Vandesompele, J.11
Wittwer, C.T.12
-
11
-
-
33144478111
-
MicroRNA-guided processing impairs Plum pox virus replication, but the virus readily evolves to escape this silencing mechanism
-
Carmen, S.M. and Juan, A.G. (2006) MicroRNA-guided processing impairs Plum pox virus replication, but the virus readily evolves to escape this silencing mechanism. J. Virol. 80, 2429-2436.
-
(2006)
J. Virol.
, vol.80
, pp. 2429-2436
-
-
Carmen, S.M.1
Juan, A.G.2
-
12
-
-
69249101248
-
Cloning and characterization of small non-coding RNAs from grape
-
Carra, A., Mica, E., Gambino, G., Pindo, M., Moser, C., Pè, M. and Schubert, A. (2009) Cloning and characterization of small non-coding RNAs from grape. Plant J. 59, 750-753.
-
(2009)
Plant J.
, vol.59
, pp. 750-753
-
-
Carra, A.1
Mica, E.2
Gambino, G.3
Pindo, M.4
Moser, C.5
Pè, M.6
Schubert, A.7
-
13
-
-
2442681764
-
Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step
-
Chapman, E.J., Prokhnevsky, A.I., Gopinath, K., Dolja, V.V. and Carrington, J.C. (2004) Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step. Genes Dev. 18, 1179-1186.
-
(2004)
Genes Dev.
, vol.18
, pp. 1179-1186
-
-
Chapman, E.J.1
Prokhnevsky, A.I.2
Gopinath, K.3
Dolja, V.V.4
Carrington, J.C.5
-
14
-
-
70350227275
-
Small RNAs and their roles in plant development
-
Chen, A. (2009) Small RNAs and their roles in plant development. Annu. Rev. Cell Dev. Biol. 25, 21-44.
-
(2009)
Annu. Rev. Cell Dev. Biol.
, vol.25
, pp. 21-44
-
-
Chen, A.1
-
15
-
-
2442604466
-
Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression
-
Chen, J., Li, W.X., Xie, D., Peng, J.R. and Ding, S.W. (2004) Viral virulence protein suppresses RNA silencing-mediated defense but upregulates the role of microRNA in host gene expression. Plant Cell, 16, 1302-1313.
-
(2004)
Plant Cell
, vol.16
, pp. 1302-1313
-
-
Chen, J.1
Li, W.X.2
Xie, D.3
Peng, J.R.4
Ding, S.W.5
-
16
-
-
70249129739
-
Differential effects of mild and severe Cucumber mosaic virus strains in the perturbation of microRNA-regulated gene expression in tomato map to the 3′ sequence of RNA 2
-
Cillo, F., Mascia, T., Pasciuto, M.M. and Gallitelli, D. (2009) Differential effects of mild and severe Cucumber mosaic virus strains in the perturbation of microRNA-regulated gene expression in tomato map to the 3′ sequence of RNA 2. Mol. Plant-Microbe Interact. 22, 1239-1249.
-
(2009)
Mol. Plant-Microbe Interact.
, vol.22
, pp. 1239-1249
-
-
Cillo, F.1
Mascia, T.2
Pasciuto, M.M.3
Gallitelli, D.4
-
17
-
-
77949570473
-
Deep sequencing analysis of viruses infecting grapevines: virome of a vineyard
-
Coetzee, B., Freeborough, M.-J., Maree, H.J., Celton, J.-M., Rees, D.J.G. and Burger, J.T. (2010) Deep sequencing analysis of viruses infecting grapevines: virome of a vineyard. Virology, 400, 157-163.
-
(2010)
Virology
, vol.400
, pp. 157-163
-
-
Coetzee, B.1
Freeborough, M.-J.2
Maree, H.J.3
Celton, J.-M.4
Rees, D.J.G.5
Burger, J.T.6
-
18
-
-
78649952453
-
Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees
-
Côté, C., Boileau, F., Roy, V., Ouellet, M., Levasseur, C., Morency, M.-J., Cooke, J.E.K., Séguin, A. and MacKay, J. (2010) Gene family structure, expression and functional analysis of HD-Zip III genes in angiosperm and gymnosperm forest trees. BMC Plant Biol. 10, 273.
-
(2010)
BMC Plant Biol.
, vol.10
, pp. 273
-
-
Côté, C.1
Boileau, F.2
Roy, V.3
Ouellet, M.4
Levasseur, C.5
Morency, M.-J.6
Cooke, J.E.K.7
Séguin, A.8
MacKay, J.9
-
19
-
-
35448978798
-
The p122 subunit of Tobacco mosaic virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and microRNA-mediated pathways
-
Csorba, T., Bovi, A., Dalmay, T. and Burgyán, J. (2007) The p122 subunit of Tobacco mosaic virus replicase is a potent silencing suppressor and compromises both small interfering RNA- and microRNA-mediated pathways. J. Virol. 81, 11768-11780.
-
(2007)
J. Virol.
, vol.81
, pp. 11768-11780
-
-
Csorba, T.1
Bovi, A.2
Dalmay, T.3
Burgyán, J.4
-
20
-
-
78650306521
-
Small RNA sorting: matchmaking for Argonautes
-
Czech, B. and Hannon, G.J. (2011) Small RNA sorting: matchmaking for Argonautes. Nat. Rev. Genet. 12, 19-31.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 19-31
-
-
Czech, B.1
Hannon, G.J.2
-
21
-
-
70449562093
-
Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis
-
Di Serio, F., Gisel, A., Navarro, B., Delgado, S., Martínez de Alba, Á.E., Donvito, G. and Flores, R. (2009) Deep sequencing of the small RNAs derived from two symptomatic variants of a chloroplastic viroid: implications for their genesis and for pathogenesis. PLoS ONE, 4, e7539.
-
(2009)
PLoS ONE
, vol.4
-
-
Di Serio, F.1
Gisel, A.2
Navarro, B.3
Delgado, S.4
Martínez de Alba, A.5
Donvito, G.6
Flores, R.7
-
22
-
-
34547587566
-
Antiviral immunity directed by small RNAs
-
Ding, S.W. and Voinnet, O. (2007) Antiviral immunity directed by small RNAs. Cell, 130, 413-426.
-
(2007)
Cell
, vol.130
, pp. 413-426
-
-
Ding, S.W.1
Voinnet, O.2
-
23
-
-
0031438685
-
Searching for patterns in genomic data
-
Dsouza, M., Larsen, N. and Overbeek, R. (1997) Searching for patterns in genomic data. Trends Genet. 13, 497-498.
-
(1997)
Trends Genet.
, vol.13
, pp. 497-498
-
-
Dsouza, M.1
Larsen, N.2
Overbeek, R.3
-
24
-
-
20444500153
-
The complex interplay between plant viruses and host RNA-silencing pathways
-
Dunoyer, P. and Voinnet, O. (2005) The complex interplay between plant viruses and host RNA-silencing pathways. Curr. Opin. Plant Biol. 8, 415-423.
-
(2005)
Curr. Opin. Plant Biol.
, vol.8
, pp. 415-423
-
-
Dunoyer, P.1
Voinnet, O.2
-
25
-
-
2442583436
-
Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing
-
Dunoyer, P., Lecellier, C.H., Parizotto, E.A., Himber, C. and Voinnet, O. (2004) Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing. Plant Cell, 16, 1235-1250.
-
(2004)
Plant Cell
, vol.16
, pp. 1235-1250
-
-
Dunoyer, P.1
Lecellier, C.H.2
Parizotto, E.A.3
Himber, C.4
Voinnet, O.5
-
26
-
-
34447649464
-
Viroids
-
(Khan, J.A. and Dijkstra, J., eds) - New York: The Haworth Press.
-
Flores, R. and Pallas, V. (2006) Viroids. In: Handbook of Plant Virology (Khan, J.A. and Dijkstra, J., eds), pp. 93-106. New York: The Haworth Press.
-
(2006)
Handbook of Plant Virology
, pp. 93-106
-
-
Flores, R.1
Pallas, V.2
-
27
-
-
24944468730
-
Viroids and viroid-host interactions
-
Flores, R., Hernández, C., Martínez de Alba, A.E., Daròs, J.A. and Di Serio, F. (2005) Viroids and viroid-host interactions. Annu. Rev. Phytopathol. 43, 117-139.
-
(2005)
Annu. Rev. Phytopathol.
, vol.43
, pp. 117-139
-
-
Flores, R.1
Hernández, C.2
Martínez de Alba, A.E.3
Daròs, J.A.4
Di Serio, F.5
-
28
-
-
79957768322
-
Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor
-
Gou, J.Y., Felippes, F.F., Liu, C.J., Weigel, D. and Wang, J.W. (2011) Negative regulation of anthocyanin biosynthesis in Arabidopsis by a miR156-targeted SPL transcription factor. Plant Cell, 23, 1512-1522.
-
(2011)
Plant Cell
, vol.23
, pp. 1512-1522
-
-
Gou, J.Y.1
Felippes, F.F.2
Liu, C.J.3
Weigel, D.4
Wang, J.W.5
-
29
-
-
79952070466
-
Virus-encoded microRNAs
-
Grundhoff, A. and Sullivan, C.S. (2011) Virus-encoded microRNAs. Virology, 411, 325-343.
-
(2011)
Virology
, vol.411
, pp. 325-343
-
-
Grundhoff, A.1
Sullivan, C.S.2
-
30
-
-
77955816318
-
Modulation of flavonoid biosynthetic pathway genes and anthocyanins due to virus infection in grapevine (Vitis vinifera L.) leaves
-
Gutha, L.R., Casassa, L.F., Harbertson, J.F. and Naidu, R.A. (2010) Modulation of flavonoid biosynthetic pathway genes and anthocyanins due to virus infection in grapevine (Vitis vinifera L.) leaves. BMC Plant Biol. 10, 187.
-
(2010)
BMC Plant Biol.
, vol.10
, pp. 187
-
-
Gutha, L.R.1
Casassa, L.F.2
Harbertson, J.F.3
Naidu, R.A.4
-
31
-
-
45549087643
-
Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica
-
He, X.-F., Fang, Y.-Y., Feng, L. and Guo, H.-S. (2008) Characterization of conserved and novel microRNAs and their targets, including a TuMV-induced TIR-NBS-LRR class R gene-derived novel miRNA in Brassica. FEBS Lett. 582, 2445-2452.
-
(2008)
FEBS Lett.
, vol.582
, pp. 2445-2452
-
-
He, X.-F.1
Fang, Y.-Y.2
Feng, L.3
Guo, H.-S.4
-
32
-
-
0043123153
-
Vienna RNA secondary structure server
-
Hofacker, I.L. (2003) Vienna RNA secondary structure server. Nucleic Acids Res. 31, 3429-3431.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3429-3431
-
-
Hofacker, I.L.1
-
33
-
-
77349092849
-
Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development
-
Jagadeeswaran, G., Zheng, Y., Sumathipala, N., Jiang, H., Arese, E., Soulages, J.L., Zhang, W. and Sunkar, R. (2010) Deep sequencing of small RNA libraries reveals dynamic regulation of conserved and novel microRNAs and microRNA-stars during silkworm development. BMC Genomics, 11, 52.
-
(2010)
BMC Genomics
, vol.11
, pp. 52
-
-
Jagadeeswaran, G.1
Zheng, Y.2
Sumathipala, N.3
Jiang, H.4
Arese, E.5
Soulages, J.L.6
Zhang, W.7
Sunkar, R.8
-
34
-
-
34848886909
-
The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla
-
Jaillon, O., Aury, J.M., Noel, B., Policriti, A., Clepet, C., Casagrande, A., Choisne, N., Aubourg, S., Vitulo, N., Jubin, C., Vezzi, A., Legeai, F., Hugueney, P., Dasilva, C., Horner, D., Mica, E., Jublot, D., Poulain, J., Bruyère, C., Billault, A., Segurens, B., Gouyvenoux, M., Ugarte, E., Cattonaro, F., Anthouard, V., Vico, V., Del Fabbro, C., Alaux, M., Di Gaspero, G., Dumas, V., Felice, N., Paillard, S., Juman, I., Moroldo, M., Scalabrin, S., Canaguier, A., Le Clainche, I., Malacrida, G., Durand, E., Pesole, G., Laucou, V., Chatelet, P., Merdinoglu, D., Delledonne, M., Pezzotti, M., Lecharny, A., Scarpelli, C., Artiguenave, F., Pè, M.E., Valle, G., Morgante, M., Caboche, M., Adam-Blondon, A.F., Weissenbach, J., Quétier, F. and Wincker, P. (2007) The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature, 449, 463-467.
-
(2007)
Nature
, vol.449
, pp. 463-467
-
-
Jaillon, O.1
Aury, J.M.2
Noel, B.3
Policriti, A.4
Clepet, C.5
Casagrande, A.6
Choisne, N.7
Aubourg, S.8
Vitulo, N.9
Jubin, C.10
Vezzi, A.11
Legeai, F.12
Hugueney, P.13
Dasilva, C.14
Horner, D.15
Mica, E.16
Jublot, D.17
Poulain, J.18
Bruyère, C.19
Billault, A.20
Segurens, B.21
Gouyvenoux, M.22
Ugarte, E.23
Cattonaro, F.24
Anthouard, V.25
Vico, V.26
Del Fabbro, C.27
Alaux, M.28
Di Gaspero, G.29
Dumas, V.30
Felice, N.31
Paillard, S.32
Juman, I.33
Moroldo, M.34
Scalabrin, S.35
Canaguier, A.36
Le Clainche, I.37
Malacrida, G.38
Durand, E.39
Pesole, G.40
Laucou, V.41
Chatelet, P.42
Merdinoglu, D.43
Delledonne, M.44
Pezzotti, M.45
Lecharny, A.46
Scarpelli, C.47
Artiguenave, F.48
Pè, M.E.49
Valle, G.50
Morgante, M.51
Caboche, M.52
Adam-Blondon, A.F.53
Weissenbach, J.54
Quétier, F.55
Wincker, P.56
more..
-
35
-
-
77955120593
-
3′-Coterminal subgenomic RNAs and putative cis-acting elements of Grapevine leafroll-associated virus 3 reveals 'unique' features of gene expression strategy in the genus Ampelovirus
-
Jarugula, S., Gowda, S., Dawson, W.O. and Naidu, R.A. (2010) 3′-Coterminal subgenomic RNAs and putative cis-acting elements of Grapevine leafroll-associated virus 3 reveals 'unique' features of gene expression strategy in the genus Ampelovirus. Virol. J. 7, 180.
-
(2010)
Virol. J.
, vol.7
, pp. 180
-
-
Jarugula, S.1
Gowda, S.2
Dawson, W.O.3
Naidu, R.A.4
-
36
-
-
70449706034
-
Molecular characterization of a member of a new species of grapevine viroid
-
Jiang, D., Guo, R., Wu, Z., Wang, H. and Li, S. (2009) Molecular characterization of a member of a new species of grapevine viroid. Arch. Virol. 154, 1563-1566.
-
(2009)
Arch. Virol.
, vol.154
, pp. 1563-1566
-
-
Jiang, D.1
Guo, R.2
Wu, Z.3
Wang, H.4
Li, S.5
-
37
-
-
2942672580
-
Computational identification of plant microRNAs and their targets, including a stress-induced miRNA
-
Jones-Rhoades, M.W. and Bartel, D.P. (2004) Computational identification of plant microRNAs and their targets, including a stress-induced miRNA. Mol. Cell, 14, 787-799.
-
(2004)
Mol. Cell
, vol.14
, pp. 787-799
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
-
38
-
-
0037320231
-
P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA function
-
Kasschau, K.D., Xie, Z., Allen, E., Llave, C., Chapman, E.J., Krizan, K.A. and Carrington, J.C. (2003) P1/HC-Pro, a viral suppressor of RNA silencing, interferes with Arabidopsis development and miRNA function. Dev. Cell, 4, 205-217.
-
(2003)
Dev. Cell
, vol.4
, pp. 205-217
-
-
Kasschau, K.D.1
Xie, Z.2
Allen, E.3
Llave, C.4
Chapman, E.J.5
Krizan, K.A.6
Carrington, J.C.7
-
39
-
-
77956111169
-
Role of small RNAs in host-microbe interactions
-
Katiyar-Agarwal, S. and Jin, H. (2010) Role of small RNAs in host-microbe interactions. Annu. Rev. Phytopathol. 48, 225-246.
-
(2010)
Annu. Rev. Phytopathol.
, vol.48
, pp. 225-246
-
-
Katiyar-Agarwal, S.1
Jin, H.2
-
40
-
-
77954048072
-
Cultivated grapevines represent a symptomless reservoir for the transmission of Hop stunt viroid to hop crops: 15 years of evolutionary analysis
-
Kawaguchi-Ito, Y., Li, S.-F., Tagawa, M., Araki, H., Goshono, M., Yamamoto, S., Tanaka, M., Narita, M., Tanaka, K., Liu, S.-X., Shikata, E. and Sano, T. (2009) Cultivated grapevines represent a symptomless reservoir for the transmission of Hop stunt viroid to hop crops: 15 years of evolutionary analysis. PLoS ONE, 4, e8386.
-
(2009)
PLoS ONE
, vol.4
-
-
Kawaguchi-Ito, Y.1
Li, S.-F.2
Tagawa, M.3
Araki, H.4
Goshono, M.5
Yamamoto, S.6
Tanaka, M.7
Narita, M.8
Tanaka, K.9
Liu, S.-X.10
Shikata, E.11
Sano, T.12
-
41
-
-
41149149873
-
Sorting out small RNAs
-
Kim, V.N. (2008) Sorting out small RNAs. Cell, 133, 25-26.
-
(2008)
Cell
, vol.133
, pp. 25-26
-
-
Kim, V.N.1
-
42
-
-
16344375892
-
Grapevine viroids
-
(Hadidi, A., Flores, R., Randles, J.W. and Semancik, J.S., eds) - Adelaide: CSIRO Publishing.
-
Little, A. and Rezaian, M.A. (2003) Grapevine viroids. In: Viroids (Hadidi, A., Flores, R., Randles, J.W. and Semancik, J.S., eds), pp. 195-206. Adelaide: CSIRO Publishing.
-
(2003)
Viroids
, pp. 195-206
-
-
Little, A.1
Rezaian, M.A.2
-
43
-
-
42449150879
-
Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (Nat-miRNAs)
-
Lu, C., Jeong, D.H., Kulkarni, K., Pillar, M., Nobuta, K., German, R., Thatcher, S.R., Maher, C., Zhang, L., Ware, D., Liu, B., Cao, X., Meyers, B.C. and Green, P.J. (2008) Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (Nat-miRNAs). Proc. Natl. Acad. Sci. USA, 105, 4951-4956.
-
(2008)
Proc. Natl. Acad. Sci. USA
, vol.105
, pp. 4951-4956
-
-
Lu, C.1
Jeong, D.H.2
Kulkarni, K.3
Pillar, M.4
Nobuta, K.5
German, R.6
Thatcher, S.R.7
Maher, C.8
Zhang, L.9
Ware, D.10
Liu, B.11
Cao, X.12
Meyers, B.C.13
Green, P.J.14
-
44
-
-
33745271035
-
Functions of microRNAs and related small RNAs in plants
-
Mallory, A.C. and Vaucheret, H. (2006) Functions of microRNAs and related small RNAs in plants. Nat. Genet. 38, S31-S36.
-
(2006)
Nat. Genet.
, vol.38
-
-
Mallory, A.C.1
Vaucheret, H.2
-
45
-
-
24944493388
-
MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes
-
Mallory, A.C., Bartel, D.P. and Bartel, B. (2005) MicroRNA-directed regulation of Arabidopsis AUXIN RESPONSE FACTOR17 is essential for proper development and modulates expression of early auxin response genes. Plant Cell, 17, 1360-1375.
-
(2005)
Plant Cell
, vol.17
, pp. 1360-1375
-
-
Mallory, A.C.1
Bartel, D.P.2
Bartel, B.3
-
46
-
-
43349085037
-
Complete nucleotide sequence of a South African isolate of Grapevine leafroll-associated virus 3 reveals a 5′UTR of 737 nucleotides
-
Maree, H.J., Freeborough, M.J. and Burger, J.T. (2008) Complete nucleotide sequence of a South African isolate of Grapevine leafroll-associated virus 3 reveals a 5′UTR of 737 nucleotides. Arch. Virol. 153, 755-757.
-
(2008)
Arch. Virol.
, vol.153
, pp. 755-757
-
-
Maree, H.J.1
Freeborough, M.J.2
Burger, J.T.3
-
47
-
-
33646082498
-
The evolution and diversification of Dicers in plants
-
Margis, R., Fusaro, A.F., Smith, N.A., Curtin, S.J., Watson, J.M., Finnegan, E.J. and Waterhouse, P.M. (2006) The evolution and diversification of Dicers in plants. FEBS Lett. 580, 2442-2450.
-
(2006)
FEBS Lett.
, vol.580
, pp. 2442-2450
-
-
Margis, R.1
Fusaro, A.F.2
Smith, N.A.3
Curtin, S.J.4
Watson, J.M.5
Finnegan, E.J.6
Waterhouse, P.M.7
-
48
-
-
0036399911
-
The family Closteroviridae revised
-
Martelli, G.P., Agranovsky, A.A., Bar-Joseph, M., Boscia, D., Candresse, T., Coutts, R.H.A., Dolja, V.V., Falk, B.W., Gonsalves, D., Jelkmann, W., Karasev, A.V., Minafra, A., Namba, S., Vetten, H.J., Wisler, G.C. and Yoshikawa, H. (2002) The family Closteroviridae revised. Arch. Virol. 147, 2039-2044.
-
(2002)
Arch. Virol.
, vol.147
, pp. 2039-2044
-
-
Martelli, G.P.1
Agranovsky, A.A.2
Bar-Joseph, M.3
Boscia, D.4
Candresse, T.5
Coutts, R.H.A.6
Dolja, V.V.7
Falk, B.W.8
Gonsalves, D.9
Jelkmann, W.10
Karasev, A.V.11
Minafra, A.12
Namba, S.13
Vetten, H.J.14
Wisler, G.C.15
Yoshikawa, H.16
-
49
-
-
77953035621
-
High-throughput sequencing of Hop stunt viroid-derived small RNAs from cucumber leaves and phloem
-
Martinez, G., Donaire, L., Ilave, C., Pallas, V. and Gomez, G. (2010) High-throughput sequencing of Hop stunt viroid-derived small RNAs from cucumber leaves and phloem. Mol. Plant Pathol. 11, 347-359.
-
(2010)
Mol. Plant Pathol.
, vol.11
, pp. 347-359
-
-
Martinez, G.1
Donaire, L.2
Ilave, C.3
Pallas, V.4
Gomez, G.5
-
50
-
-
60149090481
-
Criteria for annotation of plant microRNAs
-
Meyers, B.C., Axtell, M.J., Bartel, B., Bartel, D., Baulcombe, D., Bowman, J.L., Cao, X., Carrington, J.C., Chen, X., Green, P.J., Griffiths-Jones, S., Jacobsen, S.E., Mallory, A.C., Martienssen, R.A., Poethig, R.S., Qi, Y., Vaucheret, H., Voinnet, O., Watanabe, Y., Weigel, D. and Zhu, J.-K. (2008) Criteria for annotation of plant microRNAs. Plant Cell, 20, 3186-3190.
-
(2008)
Plant Cell
, vol.20
, pp. 3186-3190
-
-
Meyers, B.C.1
Axtell, M.J.2
Bartel, B.3
Bartel, D.4
Baulcombe, D.5
Bowman, J.L.6
Cao, X.7
Carrington, J.C.8
Chen, X.9
Green, P.J.10
Griffiths-Jones, S.11
Jacobsen, S.E.12
Mallory, A.C.13
Martienssen, R.A.14
Poethig, R.S.15
Qi, Y.16
Vaucheret, H.17
Voinnet, O.18
Watanabe, Y.19
Weigel, D.20
Zhu, J.-K.21
more..
-
51
-
-
76949103466
-
High-throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera
-
Mica, E., Piccolo, V., Delledonne, M., Ferrarini, A., Pezzotti, M., Casati, C., Del Fabbro, C., Valle, G., Policriti, A., Morgante, M., Pesole, G., Enrico Pè, M. and Horner, D. (2009) High-throughput approaches reveal splicing of primary microRNA transcripts and tissue specific expression of mature microRNAs in Vitis vinifera. BMC Genomics, 10, 558.
-
(2009)
BMC Genomics
, vol.10
, pp. 558
-
-
Mica, E.1
Piccolo, V.2
Delledonne, M.3
Ferrarini, A.4
Pezzotti, M.5
Casati, C.6
Del Fabbro, C.7
Valle, G.8
Policriti, A.9
Morgante, M.10
Pesole, G.11
Enrico Pè, M.12
Horner, D.13
-
52
-
-
46149106555
-
Small RNAs in viral infection and host defense
-
Mlotshwa, S., Pruss, G. and Vance, V. (2008) Small RNAs in viral infection and host defense. Trends Plant Sci. 13, 375-382.
-
(2008)
Trends Plant Sci.
, vol.13
, pp. 375-382
-
-
Mlotshwa, S.1
Pruss, G.2
Vance, V.3
-
53
-
-
19944370491
-
Plant virus-derived small interfering RNAs originate predominantly from highly structured single-stranded viral RNAs
-
Molnár, A., Csorba, T., Lakatos, L., Varallyay, E., Lacomme, C. and Burgyán, J. (2005) Plant virus-derived small interfering RNAs originate predominantly from highly structured single-stranded viral RNAs. J. Virol. 79, 7812-7818.
-
(2005)
J. Virol.
, vol.79
, pp. 7812-7818
-
-
Molnár, A.1
Csorba, T.2
Lakatos, L.3
Varallyay, E.4
Lacomme, C.5
Burgyán, J.6
-
54
-
-
70449683510
-
Single and mixed infections of grapevine leafroll-associated viruses in Washington State vineyards
-
Naidu, R.A., Soule, M.J. and Jarugula, S. (2006) Single and mixed infections of grapevine leafroll-associated viruses in Washington State vineyards. Phytopathology, 96, S83.
-
(2006)
Phytopathology
, vol.96
-
-
Naidu, R.A.1
Soule, M.J.2
Jarugula, S.3
-
55
-
-
77958130171
-
MicroRNA profiling of Tomato leaf curl New Delhi virus (TOLCNDV) infected tomato leaves indicates that deregulation of mir159/319 and mir172 might be linked with leaf curl disease
-
Naqvi, A.R., Haq, Q.M.R. and Mukherjee, S.K. (2010) MicroRNA profiling of Tomato leaf curl New Delhi virus (TOLCNDV) infected tomato leaves indicates that deregulation of mir159/319 and mir172 might be linked with leaf curl disease. Virol. J. 7, 281.
-
(2010)
Virol. J.
, vol.7
, pp. 281
-
-
Naqvi, A.R.1
Haq, Q.M.R.2
Mukherjee, S.K.3
-
56
-
-
70450214042
-
Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction
-
Navarro, B., Pantaleo, V., Gisel, A., Moxon, S., Dalmay, T., Bisztray, G., Di Serio, F. and Burgyán, J. (2009) Deep sequencing of viroid-derived small RNAs from grapevine provides new insights on the role of RNA silencing in plant-viroid interaction. PLoS ONE, 4, e7686.
-
(2009)
PLoS ONE
, vol.4
-
-
Navarro, B.1
Pantaleo, V.2
Gisel, A.3
Moxon, S.4
Dalmay, T.5
Bisztray, G.6
Di Serio, F.7
Burgyán, J.8
-
57
-
-
33645967758
-
A plant miRNA contributes to antibacterial resistance by repressing auxin signaling
-
Navarro, L., Dunoyer, P., Jay, F., Arnold, B., Dharmasiri, N., Estelle, M., Voinnet, O. and Jones, J.D. (2006) A plant miRNA contributes to antibacterial resistance by repressing auxin signaling. Science, 21, 436-439.
-
(2006)
Science
, vol.21
, pp. 436-439
-
-
Navarro, L.1
Dunoyer, P.2
Jay, F.3
Arnold, B.4
Dharmasiri, N.5
Estelle, M.6
Voinnet, O.7
Jones, J.D.8
-
58
-
-
58949089494
-
Regulation of small RNA accumulation in the maize shoot apex
-
Nogueira, F.T., Chitwood, D.H., Madi, S., Ohtsu, K., Schnable, P.S., Scanlon, M.J. and Timmermans, M.C. (2009) Regulation of small RNA accumulation in the maize shoot apex. PLoS Genet. 5, e1000320.
-
(2009)
PLoS Genet.
, vol.5
-
-
Nogueira, F.T.1
Chitwood, D.H.2
Madi, S.3
Ohtsu, K.4
Schnable, P.S.5
Scanlon, M.J.6
Timmermans, M.C.7
-
59
-
-
83455225619
-
Tolerance and resistance to viruses and their vectors in Vitis sp.: a virologist's perspective of the literature
-
Oliver, J.E. and Fuchs, M. (2011) Tolerance and resistance to viruses and their vectors in Vitis sp.: a virologist's perspective of the literature. Am. J. Enol. Vitic. 62, 438-451.
-
(2011)
Am. J. Enol. Vitic.
, vol.62
, pp. 438-451
-
-
Oliver, J.E.1
Fuchs, M.2
-
60
-
-
78049263889
-
Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine
-
Pantaleo, V., Saldarelli, P., Miozzi, L., Giampetruzzi, A., Gisel, A., Moxon, S., Dalmay, T., Bisztray, G. and Burgyan, J. (2010a) Deep sequencing analysis of viral short RNAs from an infected Pinot Noir grapevine. Virology, 408, 49-56.
-
(2010)
Virology
, vol.408
, pp. 49-56
-
-
Pantaleo, V.1
Saldarelli, P.2
Miozzi, L.3
Giampetruzzi, A.4
Gisel, A.5
Moxon, S.6
Dalmay, T.7
Bisztray, G.8
Burgyan, J.9
-
61
-
-
77953489252
-
Identification of grapevine microRNAs and their targets using high throughput sequencing and degradome analysis
-
Pantaleo, V., Szittya, G., Moxon, S., Miozzi, L., Moulton, V., Dalmay, T. and Burgyan, J. (2010b) Identification of grapevine microRNAs and their targets using high throughput sequencing and degradome analysis. Plant J. 62, 960-976.
-
(2010)
Plant J.
, vol.62
, pp. 960-976
-
-
Pantaleo, V.1
Szittya, G.2
Moxon, S.3
Miozzi, L.4
Moulton, V.5
Dalmay, T.6
Burgyan, J.7
-
62
-
-
77649239548
-
Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems
-
Parameswaran, P., Sklan, E., Wilkins, C., Burgon, T., Samuel, M.A., Lu, R., Ansel, K.M., Heissmeyer, V., Einav, S., Jackson, W., Doukas, T., Paranjape, S., Polacek, C., Barreto dos Santos, F., Jalili, R., Babrzadeh, F., Gharizadeh, B., Grimm, D., Kay, M., Koike, S., Sarnow, P., Ronaghi, M., Ding, S.-W., Harris, E., Chow, M., Diamond, M.S., Kirkegaard, K., Glenn, J.S. and Fire, A.Z. (2010) Six RNA viruses and forty-one hosts: viral small RNAs and modulation of small RNA repertoires in vertebrate and invertebrate systems. PLoS Pathog. 6, e1000764.
-
(2010)
PLoS Pathog.
, vol.6
-
-
Parameswaran, P.1
Sklan, E.2
Wilkins, C.3
Burgon, T.4
Samuel, M.A.5
Lu, R.6
Ansel, K.M.7
Heissmeyer, V.8
Einav, S.9
Jackson, W.10
Doukas, T.11
Paranjape, S.12
Polacek, C.13
Barreto dos Santos, F.14
Jalili, R.15
Babrzadeh, F.16
Gharizadeh, B.17
Grimm, D.18
Kay, M.19
Koike, S.20
Sarnow, P.21
Ronaghi, M.22
Ding, S.-W.23
Harris, E.24
Chow, M.25
Diamond, M.S.26
Kirkegaard, K.27
Glenn, J.S.28
Fire, A.Z.29
more..
-
63
-
-
0031153997
-
Plant viral synergism: the potyviral genome encodes a broad range pathogenicity enhancer that transactivates replication of the heterologous viruses
-
Pruss, G., Ge, X., Shi, M.X., Carrington, J.C. and Vance, V.B. (1997) Plant viral synergism: the potyviral genome encodes a broad range pathogenicity enhancer that transactivates replication of the heterologous viruses. Plant Cell, 9, 859-868.
-
(1997)
Plant Cell
, vol.9
, pp. 859-868
-
-
Pruss, G.1
Ge, X.2
Shi, M.X.3
Carrington, J.C.4
Vance, V.B.5
-
64
-
-
77949389564
-
Co-ordination of developmental processes by small RNAs during leaf development
-
Pulido, A. and Laufs, P. (2010) Co-ordination of developmental processes by small RNAs during leaf development. J. Exp. Bot. 61, 1277-1291.
-
(2010)
J. Exp. Bot.
, vol.61
, pp. 1277-1291
-
-
Pulido, A.1
Laufs, P.2
-
65
-
-
84867979127
-
Grapevine leafroll disease
-
WSU Extension Bulletin EB2027E. Available at [Accessed on March 6, 2012].
-
Rayapati, A.N., O'Neil, S. and Walsh, D. (2008) Grapevine leafroll disease. WSU Extension Bulletin EB2027E. Available at http://cru.cahe.wsu.edu/CEPublications/eb2027e/eb2027e.pdf; 2008 [Accessed on March 6, 2012].
-
(2008)
-
-
Rayapati, A.N.1
O'Neil, S.2
Walsh, D.3
-
66
-
-
0037162702
-
Prediction of plant microRNA targets
-
Rhoades, M.W., Reinhart, B.J., Lim, L.P., Burge, C.B., Bartel, B. and Bartel, D. (2002) Prediction of plant microRNA targets. Cell, 110, 513-520.
-
(2002)
Cell
, vol.110
, pp. 513-520
-
-
Rhoades, M.W.1
Reinhart, B.J.2
Lim, L.P.3
Burge, C.B.4
Bartel, B.5
Bartel, D.6
-
67
-
-
67651036643
-
Roles of plant small RNAs in biotic stress responses
-
Ruiz-Ferrer, V. and Voinnet, O. (2009) Roles of plant small RNAs in biotic stress responses. Annu. Rev. Plant Biol. 60, 485-510.
-
(2009)
Annu. Rev. Plant Biol.
, vol.60
, pp. 485-510
-
-
Ruiz-Ferrer, V.1
Voinnet, O.2
-
68
-
-
0033034469
-
A synergism induced by satellite Panicum mosaic virus
-
Scholthof, K.B. (1999) A synergism induced by satellite Panicum mosaic virus. Mol. Plant-Microbe Interact. 12, 163-166.
-
(1999)
Mol. Plant-Microbe Interact.
, vol.12
, pp. 163-166
-
-
Scholthof, K.B.1
-
69
-
-
36349023305
-
The conserved FRNK box in HC-Pro, a plant viral suppressor of gene silencing, is required for small RNA binding and mediates symptom development
-
Shiboleth, Y.M., Haronsky, E., Leibman, D., Arazi, T., Wassenegger, M., Whitham, S.A., Gaba, V. and Gal-On, A. (2007) The conserved FRNK box in HC-Pro, a plant viral suppressor of gene silencing, is required for small RNA binding and mediates symptom development. J. Virol. 81, 13135-13148.
-
(2007)
J. Virol.
, vol.81
, pp. 13135-13148
-
-
Shiboleth, Y.M.1
Haronsky, E.2
Leibman, D.3
Arazi, T.4
Wassenegger, M.5
Whitham, S.A.6
Gaba, V.7
Gal-On, A.8
-
70
-
-
1242276761
-
Effects and side-effects of viral RNA silencing suppressors on short RNAs
-
Silhavy, D. and Burgyan, J. (2004) Effects and side-effects of viral RNA silencing suppressors on short RNAs. Trends Plant Sci. 9, 76-83.
-
(2004)
Trends Plant Sci.
, vol.9
, pp. 76-83
-
-
Silhavy, D.1
Burgyan, J.2
-
71
-
-
80655127842
-
Antiviral strategies in plants based on RNA silencing
-
Simón-Mateo, C. and García, J.A. (2011) Antiviral strategies in plants based on RNA silencing. Biochim. Biophys. Acta, 1809, 722-731.
-
(2011)
Biochim. Biophys. Acta
, vol.1809
, pp. 722-731
-
-
Simón-Mateo, C.1
García, J.A.2
-
72
-
-
58149119365
-
Characterization of the siRNAs associated with Peach latent mosaic viroid infection
-
St-Pierre, P., Hassen, F., Thompson, D. and Perreault, J.P. (2009) Characterization of the siRNAs associated with Peach latent mosaic viroid infection. Virology, 383, 178-182.
-
(2009)
Virology
, vol.383
, pp. 178-182
-
-
St-Pierre, P.1
Hassen, F.2
Thompson, D.3
Perreault, J.P.4
-
73
-
-
4043074968
-
Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis
-
Sunkar, R. and Zhu, J.-K. (2004) Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. Plant Cell, 16, 2001-2019.
-
(2004)
Plant Cell
, vol.16
, pp. 2001-2019
-
-
Sunkar, R.1
Zhu, J.-K.2
-
74
-
-
84862779295
-
Functions of microRNAs in plant stress responses
-
Sunkar, R., Li, Y.-F. and Jagadeeswaran, G. (2012) Functions of microRNAs in plant stress responses. Trends Plant Sci. 17, 196-203.
-
(2012)
Trends Plant Sci.
, vol.17
, pp. 196-203
-
-
Sunkar, R.1
Li, Y.-F.2
Jagadeeswaran, G.3
-
75
-
-
0010270360
-
The vein banding disease syndrome: a synergistic reaction between grapevine viroids and fanleaf virus
-
Szychowski, J.A., McKenry, M.V., Walker, M.A., Wolpert, J.A., Credi, R. and Semancik, J.S. (1995) The vein banding disease syndrome: a synergistic reaction between grapevine viroids and fanleaf virus. Vitis, 34, 229-232.
-
(1995)
Vitis
, vol.34
, pp. 229-232
-
-
Szychowski, J.A.1
McKenry, M.V.2
Walker, M.A.3
Wolpert, J.A.4
Credi, R.5
Semancik, J.S.6
-
76
-
-
39749105400
-
Specific enrichment of miRNAs in Arabidopsis thaliana infected with Tobacco mosaic virus
-
Tagami, Y., Inaba, N., Kutsuna, N., Kurihara, Y. and Watanabe, Y. (2007) Specific enrichment of miRNAs in Arabidopsis thaliana infected with Tobacco mosaic virus. DNA Res. 14, 227-233.
-
(2007)
DNA Res.
, vol.14
, pp. 227-233
-
-
Tagami, Y.1
Inaba, N.2
Kutsuna, N.3
Kurihara, Y.4
Watanabe, Y.5
-
77
-
-
33747209106
-
Historical origins and genetic diversity of wine grapes
-
This, P., Lacombe, T. and Thomas, M.R. (2006) Historical origins and genetic diversity of wine grapes. Trends Genet. 22, 511-519.
-
(2006)
Trends Genet.
, vol.22
, pp. 511-519
-
-
This, P.1
Lacombe, T.2
Thomas, M.R.3
-
78
-
-
54049098797
-
Viroids
-
Tsagris, E.M., Martinez de Alba, A.E., Gozmanova, M. and Kalantidis, K. (2008) Viroids. Cell. Microbiol. 10, 2168-2179.
-
(2008)
Cell. Microbiol.
, vol.10
, pp. 2168-2179
-
-
Tsagris, E.M.1
Martinez de Alba, A.E.2
Gozmanova, M.3
Kalantidis, K.4
-
79
-
-
84985521993
-
Accumulation of Potato virus Y is enhanced in Solanum brevidens also infected with Tobacco mosaic virus or potato spindle storage root viroid
-
Valkonen, J.P.T. (1992) Accumulation of Potato virus Y is enhanced in Solanum brevidens also infected with Tobacco mosaic virus or potato spindle storage root viroid. Ann. Appl. Biol. 121, 321-327.
-
(1992)
Ann. Appl. Biol.
, vol.121
, pp. 321-327
-
-
Valkonen, J.P.T.1
-
80
-
-
77958461762
-
Plant virus-mediated induction of miR168 is associated with repression of ARGONAUTE1 accumulation
-
Várallyay, E., Válóczi, A., Agyi, A., Burgyán, J. and Havelda, Z. (2010) Plant virus-mediated induction of miR168 is associated with repression of ARGONAUTE1 accumulation. EMBO J. 29, 3507-3519.
-
(2010)
EMBO J.
, vol.29
, pp. 3507-3519
-
-
Várallyay, E.1
Válóczi, A.2
Agyi, A.3
Burgyán, J.4
Havelda, Z.5
-
81
-
-
33645528966
-
Post-transcriptional small RNA pathways in plants: mechanisms and regulations
-
Vaucheret, H. (2006) Post-transcriptional small RNA pathways in plants: mechanisms and regulations. Genes Dev. 20, 759-771.
-
(2006)
Genes Dev.
, vol.20
, pp. 759-771
-
-
Vaucheret, H.1
-
82
-
-
2442650370
-
The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development
-
Vaucheret, H., Vazquez, F., Crete, P. and Bartel, D.P. (2004) The action of ARGONAUTE1 in the miRNA pathway and its regulation by the miRNA pathway are crucial for plant development. Genes Dev. 18, 1187-1197.
-
(2004)
Genes Dev.
, vol.18
, pp. 1187-1197
-
-
Vaucheret, H.1
Vazquez, F.2
Crete, P.3
Bartel, D.P.4
-
83
-
-
33645967150
-
AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1
-
Vaucheret, H., Mallory, A. and Bartel, D. (2006) AGO1 homeostasis entails coexpression of MIR168 and AGO1 and preferential stabilization of miR168 by AGO1. Mol. Cell, 22, 129-136.
-
(2006)
Mol. Cell
, vol.22
, pp. 129-136
-
-
Vaucheret, H.1
Mallory, A.2
Bartel, D.3
-
84
-
-
41249098849
-
A high quality draft consensus sequence of the genome of a heterozygous grapevine variety
-
Velasco, R., Zharkikh, A., Troggio, M., Cartwright, D.A., Cestaro, A., Pruss, D., Pindo, M., Fitzgerald, L.M., Vezzulli, S., Reid, J., Malacarne, G., Iliev, D., Coppola, G., Wardell, B., Micheletti, D., Macalma, T., Facci, M., Mitchell, J.T., Perazzolli, M., Eldredge, G., Gatto, P., Oyzerski, R., Moretto, M., Gutin, N., Stefanini, M., Chen, Y., Segala, C., Davenport, C., Demattè, L., Mraz, A., Battilana, J., Stormo, K., Costa, F., Tao, Q., Si-Ammour, A., Harkins, T., Lackey, A., Perbost, C., Taillon, B., Stella, A., Solovyev, V., Fawcett, J.A., Sterck, L., Vandepoele, K., Grando, S.M., Toppo, S., Moser, C., Lanchbury, J., Bogden, R., Skolnick, M., Sgaramella, V., Bhatnagar, S.K., Fontana, P., Gutin, A., Van de Peer, Y., Salamini, F. and Viola, R. (2007) A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. PLoS ONE, 2, e1326.
-
(2007)
PLoS ONE
, vol.2
-
-
Velasco, R.1
Zharkikh, A.2
Troggio, M.3
Cartwright, D.A.4
Cestaro, A.5
Pruss, D.6
Pindo, M.7
Fitzgerald, L.M.8
Vezzulli, S.9
Reid, J.10
Malacarne, G.11
Iliev, D.12
Coppola, G.13
Wardell, B.14
Micheletti, D.15
Macalma, T.16
Facci, M.17
Mitchell, J.T.18
Perazzolli, M.19
Eldredge, G.20
Gatto, P.21
Oyzerski, R.22
Moretto, M.23
Gutin, N.24
Stefanini, M.25
Chen, Y.26
Segala, C.27
Davenport, C.28
Demattè, L.29
Mraz, A.30
Battilana, J.31
Stormo, K.32
Costa, F.33
Tao, Q.34
Si-Ammour, A.35
Harkins, T.36
Lackey, A.37
Perbost, C.38
Taillon, B.39
Stella, A.40
Solovyev, V.41
Fawcett, J.A.42
Sterck, L.43
Vandepoele, K.44
Grando, S.M.45
Toppo, S.46
Moser, C.47
Lanchbury, J.48
Bogden, R.49
Skolnick, M.50
Sgaramella, V.51
Bhatnagar, S.K.52
Fontana, P.53
Gutin, A.54
Van de Peer, Y.55
Salamini, F.56
Viola, R.57
more..
-
85
-
-
33645968094
-
Interactions between citrus viroids affect symptom expression and field performance of Clementine trees grafted on trifoliate orange
-
Vernière, C., Perrier, X., Dubois, C., Dubois, A., Botella, L., Chabrier, C., Bové, J.M. and Duran Vila, N. (2006) Interactions between citrus viroids affect symptom expression and field performance of Clementine trees grafted on trifoliate orange. Phytopathology, 96, 356-368.
-
(2006)
Phytopathology
, vol.96
, pp. 356-368
-
-
Vernière, C.1
Perrier, X.2
Dubois, C.3
Dubois, A.4
Botella, L.5
Chabrier, C.6
Bové, J.M.7
Duran Vila, N.8
-
86
-
-
80051564048
-
Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase
-
Wang, C., Wanga, X., Kibeta, N.K., Songa, C., Zhang, C., Lia, X., Hana, J. and Fanga, J. (2011a) Deep sequencing of grapevine flower and berry short RNA library for discovery of novel microRNAs and validation of precise sequences of grapevine microRNAs deposited in miRBase. Physiol. Plant. 143, 64-81.
-
(2011)
Physiol. Plant.
, vol.143
, pp. 64-81
-
-
Wang, C.1
Wanga, X.2
Kibeta, N.K.3
Songa, C.4
Zhang, C.5
Lia, X.6
Hana, J.7
Fanga, J.8
-
87
-
-
79952261472
-
miRNA control of vegetative phase transition in trees
-
Wang, J.-W., Park, M.Y., Wang, L.-J., Koo, Y., Chen, X.-Y., Weigel, D. and Poethig, R. (2011b) miRNA control of vegetative phase transition in trees. PLoS Genet. 7, e1002012.
-
(2011)
PLoS Genet.
, vol.7
-
-
Wang, J.-W.1
Park, M.Y.2
Wang, L.-J.3
Koo, Y.4
Chen, X.-Y.5
Weigel, D.6
Poethig, R.7
-
88
-
-
76249093088
-
RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana
-
Wang, X.-B., Wu, Q., Ito, T., Cillo, F., Li, W.-X., Chen, X., Yu, J.-L. and Ding, S.-W. (2010) RNAi-mediated viral immunity requires amplification of virus-derived siRNAs in Arabidopsis thaliana. Proc. Natl. Acad. Sci. USA, 107, 484-489.
-
(2010)
Proc. Natl. Acad. Sci. USA
, vol.107
, pp. 484-489
-
-
Wang, X.-B.1
Wu, Q.2
Ito, T.3
Cillo, F.4
Li, W.-X.5
Chen, X.6
Yu, J.-L.7
Ding, S.-W.8
-
89
-
-
0038076109
-
Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation
-
Xie, Z.X., Kasschau, K. and Carrington, J. (2003) Negative feedback regulation of Dicer-Like1 in Arabidopsis by microRNA-guided mRNA degradation. Curr. Biol. 13, 784-789.
-
(2003)
Curr. Biol.
, vol.13
, pp. 784-789
-
-
Xie, Z.X.1
Kasschau, K.2
Carrington, J.3
-
90
-
-
29144527030
-
Plant microRNA: a small regulatory molecule with big impact
-
Zhang, B., Pan, X., Cobb, G.P. and Anderson, T.A. (2006) Plant microRNA: a small regulatory molecule with big impact. Dev. Biol. 289, 3-16.
-
(2006)
Dev. Biol.
, vol.289
, pp. 3-16
-
-
Zhang, B.1
Pan, X.2
Cobb, G.P.3
Anderson, T.A.4
-
91
-
-
77955580091
-
Animal microRNA target prediction using diverse sequence-specific determinants
-
Zheng, Y. and Zhang, W. (2010) Animal microRNA target prediction using diverse sequence-specific determinants. J. Bioinform. Comput. Biol. 8, 763-788.
-
(2010)
J. Bioinform. Comput. Biol.
, vol.8
, pp. 763-788
-
-
Zheng, Y.1
Zhang, W.2
-
92
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res. 31, 3406-3415.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|