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Volumn 431, Issue 2, 2012, Pages 132-138

Evaluation of techniques for generation of single-stranded DNA for quantitative detection

Author keywords

Alkaline denaturation; Exonuclease digestion; Single stranded DNA; Streptavidin coated magnetic beads; Thermal denaturation

Indexed keywords

DENATURATION; DNA; ELECTROPHORESIS; MAGNETIC SEPARATION; OLIGONUCLEOTIDES; PROTEINS; RECOVERY;

EID: 84867644434     PISSN: 00032697     EISSN: 10960309     Source Type: Journal    
DOI: 10.1016/j.ab.2012.09.003     Document Type: Article
Times cited : (35)

References (20)
  • 1
    • 0038358146 scopus 로고    scopus 로고
    • A novel method for preparing single-stranded DNA for pyrosequencing
    • M.A. Diggle, and S.C. Clarke A novel method for preparing single-stranded DNA for pyrosequencing Mol. Biotechnol. 24 2003 221 224
    • (2003) Mol. Biotechnol. , vol.24 , pp. 221-224
    • Diggle, M.A.1    Clarke, S.C.2
  • 2
    • 0024595101 scopus 로고
    • Detection of polymorphisms of human DNA by gel-electrophoresis as single-strand conformation polymorphisms
    • M. Orita, H. Iwahana, H. Kanazawa, K. Hayashi, and T. Sekiya Detection of polymorphisms of human DNA by gel-electrophoresis as single-strand conformation polymorphisms Proc. Natl. Acad. Sci. USA 86 1989 2766 2770
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 2766-2770
    • Orita, M.1    Iwahana, H.2    Kanazawa, H.3    Hayashi, K.4    Sekiya, T.5
  • 4
    • 0035315802 scopus 로고    scopus 로고
    • Detection of mitochondrial single nucleotide polymorphisms using a primer elongation reaction on oligonucleotide microarrays
    • F. Erdogan, R. Kirchner, W. Mann, H.H. Ropers, and U.A. Nuber Detection of mitochondrial single nucleotide polymorphisms using a primer elongation reaction on oligonucleotide microarrays Nucleic Acids Res. 29 2001 e36
    • (2001) Nucleic Acids Res. , vol.29 , pp. 36
    • Erdogan, F.1    Kirchner, R.2    Mann, W.3    Ropers, H.H.4    Nuber, U.A.5
  • 6
    • 0043237372 scopus 로고    scopus 로고
    • Single nucleotide polymorphism discrimination assisted by improved base stacking hybridization using oligonucleotide microarrays
    • D. Wang, H. Gao, R. Zhang, X. Ma, Y. Zhou, and J. Cheng Single nucleotide polymorphism discrimination assisted by improved base stacking hybridization using oligonucleotide microarrays BioTechniques 35 2003 300 308
    • (2003) BioTechniques , vol.35 , pp. 300-308
    • Wang, D.1    Gao, H.2    Zhang, R.3    Ma, X.4    Zhou, Y.5    Cheng, J.6
  • 7
    • 34347338608 scopus 로고    scopus 로고
    • Development of combined DNA-based piezoelectric biosensors for the simultaneous detection and genotyping of high risk human papillomavirus strains
    • D. Dell'Atti, M. Zavaglia, S. Tombelli, G. Bertacca, A.O. Cavazzana, G. Bevilacqua, M. Minunni, and M. Mascini Development of combined DNA-based piezoelectric biosensors for the simultaneous detection and genotyping of high risk human papillomavirus strains Clin. Chim. Acta 383 2007 140 146
    • (2007) Clin. Chim. Acta , vol.383 , pp. 140-146
    • Dell'Atti, D.1    Zavaglia, M.2    Tombelli, S.3    Bertacca, G.4    Cavazzana, A.O.5    Bevilacqua, G.6    Minunni, M.7    Mascini, M.8
  • 8
    • 14644444164 scopus 로고    scopus 로고
    • Enzyme-based impedimetric detection of PCR products using oligonucleotides-modified screen-printed gold electrodes
    • F. Lucarelli, G. Marrazza, and M. Mascini Enzyme-based impedimetric detection of PCR products using oligonucleotides-modified screen-printed gold electrodes Biosens. Bioelectron. 20 2005 2001 2009
    • (2005) Biosens. Bioelectron. , vol.20 , pp. 2001-2009
    • Lucarelli, F.1    Marrazza, G.2    Mascini, M.3
  • 9
    • 0242581339 scopus 로고
    • Generation of single-stranded DNA by the polymerase chain reaction and its application to direct sequencing of the HLA-DQA locus
    • U.B. Gyllensten, and H.A. Erlich Generation of single-stranded DNA by the polymerase chain reaction and its application to direct sequencing of the HLA-DQA locus Proc. Natl. Acad. Sci. USA 85 1988 7652 7656
    • (1988) Proc. Natl. Acad. Sci. USA , vol.85 , pp. 7652-7656
    • Gyllensten, U.B.1    Erlich, H.A.2
  • 10
    • 0029814699 scopus 로고    scopus 로고
    • Rapid preparation of single-stranded DNA from PCR products by streptavidin induced electrophoretic mobility shift
    • N.C. Pagratis Rapid preparation of single-stranded DNA from PCR products by streptavidin induced electrophoretic mobility shift Nucleic Acids Res. 24 1996 3645 3646
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3645-3646
    • Pagratis, N.C.1
  • 11
    • 0343096429 scopus 로고
    • Production of single-stranded DNA templates by exonuclease digestion following the polymerase chain reaction
    • R.G. Higuchi, and H. Ochman Production of single-stranded DNA templates by exonuclease digestion following the polymerase chain reaction Nucleic Acids Res. 17 1989 5865
    • (1989) Nucleic Acids Res. , vol.17 , pp. 5865
    • Higuchi, R.G.1    Ochman, H.2
  • 12
    • 0015499976 scopus 로고
    • Gene 6 exonuclease of bacteriophage T7: 2. Mechanism of reaction
    • C. Kerr, and P.D. Sadowski Gene 6 exonuclease of bacteriophage T7: 2. Mechanism of reaction J. Biol. Chem. 247 1972 311 318
    • (1972) J. Biol. Chem. , vol.247 , pp. 311-318
    • Kerr, C.1    Sadowski, P.D.2
  • 13
    • 0028210782 scopus 로고
    • The use of phosphorothioate primers and exonuclease hydrolysis for the preparation of single-stranded PCR products and their detection by solid-phase hybridization
    • T.T. Nikiforov, R.B. Rendle, M.L. Kotewicz, and Y.H. Rogers The use of phosphorothioate primers and exonuclease hydrolysis for the preparation of single-stranded PCR products and their detection by solid-phase hybridization Genome Res. 3 1994 285 291
    • (1994) Genome Res. , vol.3 , pp. 285-291
    • Nikiforov, T.T.1    Rendle, R.B.2    Kotewicz, M.L.3    Rogers, Y.H.4
  • 14
    • 0025183759 scopus 로고
    • A simple method for generating single-stranded DNA probes labeled to high activities
    • M. Espelund, R.A.P. Stacy, and K.S. Jakobsen A simple method for generating single-stranded DNA probes labeled to high activities Nucleic Acids Res. 18 1990 6157 6158
    • (1990) Nucleic Acids Res. , vol.18 , pp. 6157-6158
    • Espelund, M.1    Stacy, R.A.P.2    Jakobsen, K.S.3
  • 15
    • 70349288034 scopus 로고    scopus 로고
    • Streptavidin-coated magnetic beads for DNA strand separation implicate a multitude of problems during cell-SELEX
    • A. Paul, M. Avci-Adali, G. Ziemer, and H.P. Wendel Streptavidin-coated magnetic beads for DNA strand separation implicate a multitude of problems during cell-SELEX Oligonucleotides 19 2009 243 254
    • (2009) Oligonucleotides , vol.19 , pp. 243-254
    • Paul, A.1    Avci-Adali, M.2    Ziemer, G.3    Wendel, H.P.4
  • 16
    • 0030577120 scopus 로고    scopus 로고
    • Papillomavirus infections: A major cause of human cancers
    • H.Z. Hausen Papillomavirus infections: a major cause of human cancers Biochim. Biophys. Acta 1288 1996 F55 F78
    • (1996) Biochim. Biophys. Acta , vol.1288
    • Hausen, H.Z.1
  • 18
    • 0033988341 scopus 로고    scopus 로고
    • Human papillomaviruses and cervical neoplasia: A model for carcinogenesis
    • M.H. Stoler Human papillomaviruses and cervical neoplasia: a model for carcinogenesis Int. J. Gynecol. Pathol. 19 2000 16 28
    • (2000) Int. J. Gynecol. Pathol. , vol.19 , pp. 16-28
    • Stoler, M.H.1
  • 19
    • 75749139323 scopus 로고    scopus 로고
    • Upgrading SELEX technology by using lambda exonuclease digestion for single-stranded DNA generation
    • M. Avci-Adali, A. Paul, N. Wilhelm, G. Ziemer, and H.P. Wendel Upgrading SELEX technology by using lambda exonuclease digestion for single-stranded DNA generation Molecules 15 2010 1 11
    • (2010) Molecules , vol.15 , pp. 1-11
    • Avci-Adali, M.1    Paul, A.2    Wilhelm, N.3    Ziemer, G.4    Wendel, H.P.5
  • 20
    • 79955069333 scopus 로고    scopus 로고
    • Conditions optimized for the preparation of single-stranded DNA (ssDNA) employing lambda exonuclease digestion in generating DNA aptamer
    • M. Citartan, T.H. Tang, S.C. Tan, and S.C.B. Gopinath Conditions optimized for the preparation of single-stranded DNA (ssDNA) employing lambda exonuclease digestion in generating DNA aptamer World J. Microbiol. Biotechnol. 27 2011 1167 1173
    • (2011) World J. Microbiol. Biotechnol. , vol.27 , pp. 1167-1173
    • Citartan, M.1    Tang, T.H.2    Tan, S.C.3    Gopinath, S.C.B.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.