-
1
-
-
11844301261
-
Recent developments in the PHENIX software for automated crystallographic structure determination
-
P.D. Adams, K. Gopal, R.W. Grosse-Kunstleve, L.W. Hung, T.R. Ioerger, A.J. McCoy, N.W. Moriarty, R.K. Pai, R.J. Read, and T.D. Romo Recent developments in the PHENIX software for automated crystallographic structure determination J. Synchrotron Radiat. 11 2004 53 55
-
(2004)
J. Synchrotron Radiat.
, vol.11
, pp. 53-55
-
-
Adams, P.D.1
Gopal, K.2
Grosse-Kunstleve, R.W.3
Hung, L.W.4
Ioerger, T.R.5
McCoy, A.J.6
Moriarty, N.W.7
Pai, R.K.8
Read, R.J.9
Romo, T.D.10
-
2
-
-
0242460576
-
Generation, representation and flow of phase information in structure determination: Recent developments in and around SHARP 2.0
-
G. Bricogne, C. Vonrhein, C. Flensburg, M. Schiltz, and W. Paciorek Generation, representation and flow of phase information in structure determination: recent developments in and around SHARP 2.0 Acta Crystallogr. D Biol. Crystallogr. 59 2003 2023 2030
-
(2003)
Acta Crystallogr. D Biol. Crystallogr.
, vol.59
, pp. 2023-2030
-
-
Bricogne, G.1
Vonrhein, C.2
Flensburg, C.3
Schiltz, M.4
Paciorek, W.5
-
3
-
-
84864950352
-
Conditional cooperativity in toxin-antitoxin regulation prevents random toxin activation and promotes fast translational recovery
-
I. Cataudella, A. Trusina, K. Sneppen, K. Gerdes, and N. Mitarai Conditional cooperativity in toxin-antitoxin regulation prevents random toxin activation and promotes fast translational recovery Nucleic Acids Res. 40 2012 6424 6434
-
(2012)
Nucleic Acids Res.
, vol.40
, pp. 6424-6434
-
-
Cataudella, I.1
Trusina, A.2
Sneppen, K.3
Gerdes, K.4
Mitarai, N.5
-
4
-
-
35649008288
-
Structural and thermodynamic characterization of the Escherichia coli RelBE toxin-antitoxin system: Indication for a functional role of differential stability
-
I. Cherny, M. Overgaard, J. Borch, Y. Bram, K. Gerdes, and E. Gazit Structural and thermodynamic characterization of the Escherichia coli RelBE toxin-antitoxin system: indication for a functional role of differential stability Biochemistry 46 2007 12152 12163
-
(2007)
Biochemistry
, vol.46
, pp. 12152-12163
-
-
Cherny, I.1
Overgaard, M.2
Borch, J.3
Bram, Y.4
Gerdes, K.5
Gazit, E.6
-
6
-
-
0028103275
-
The CCP4 suite: Programs for protein crystallography
-
Collaborative Computational Project, Number 4
-
Collaborative Computational Project, Number 4 The CCP4 suite: programs for protein crystallography Acta Crystallogr. D Biol. Crystallogr. 50 1994 760 763
-
(1994)
Acta Crystallogr. D Biol. Crystallogr.
, vol.50
, pp. 760-763
-
-
-
8
-
-
70349845295
-
Crystal structure of the antitoxin-toxin protein complex RelB-RelE from Methanococcus jannaschii
-
D. Francuski, and W. Saenger Crystal structure of the antitoxin-toxin protein complex RelB-RelE from Methanococcus jannaschii J. Mol. Biol. 393 2009 898 908
-
(2009)
J. Mol. Biol.
, vol.393
, pp. 898-908
-
-
Francuski, D.1
Saenger, W.2
-
9
-
-
77954256912
-
Allostery and intrinsic disorder mediate transcription regulation by conditional cooperativity
-
A. Garcia-Pino, S. Balasubramanian, L. Wyns, E. Gazit, H. De Greve, R.D. Magnuson, D. Charlier, N.A. van Nuland, and R. Loris Allostery and intrinsic disorder mediate transcription regulation by conditional cooperativity Cell 142 2010 101 111
-
(2010)
Cell
, vol.142
, pp. 101-111
-
-
Garcia-Pino, A.1
Balasubramanian, S.2
Wyns, L.3
Gazit, E.4
De Greve, H.5
Magnuson, R.D.6
Charlier, D.7
Van Nuland, N.A.8
Loris, R.9
-
12
-
-
34548232365
-
Inference of macromolecular assemblies from crystalline state
-
E. Krissinel, and K. Henrick Inference of macromolecular assemblies from crystalline state J. Mol. Biol. 372 2007 774 797
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 774-797
-
-
Krissinel, E.1
Henrick, K.2
-
13
-
-
44649143795
-
Structural mechanism of transcriptional autorepression of the Escherichia coli RelB/RelE antitoxin/toxin module
-
G.Y. Li, Y. Zhang, M. Inouye, and M. Ikura Structural mechanism of transcriptional autorepression of the Escherichia coli RelB/RelE antitoxin/toxin module J. Mol. Biol. 380 2008 107 119
-
(2008)
J. Mol. Biol.
, vol.380
, pp. 107-119
-
-
Li, G.Y.1
Zhang, Y.2
Inouye, M.3
Ikura, M.4
-
14
-
-
67649794729
-
Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site
-
G.Y. Li, Y. Zhang, M. Inouye, and M. Ikura Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site J. Biol. Chem. 284 2009 14628 14636
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 14628-14636
-
-
Li, G.Y.1
Zhang, Y.2
Inouye, M.3
Ikura, M.4
-
15
-
-
34447508216
-
Phaser crystallographic software
-
A.J. McCoy, R.W. Grosse-Kunstleve, P.D. Adams, M.D. Winn, L.C. Storoni, and R.J. Read Phaser crystallographic software J. Appl. Cryst. 40 2007 658 674
-
(2007)
J. Appl. Cryst.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
16
-
-
84875813544
-
-
Miallau, L., Chernishof, I., Chiang, J., Arbing, M., Cascio, D., Eisenberg, D. (2012). The crystal structure of the toxin-antitoxin complex RelBE2 (Rv2865-2866) from Mycobacterium tuberculosis. http://www.rcsb.org/pdb/ explore/explore.do?structureId=3G5O.
-
(2012)
The Crystal Structure of the Toxin-antitoxin Complex RelBE2 (Rv2865-2866) from Mycobacterium Tuberculosis
-
-
Miallau, L.1
Chernishof, I.2
Chiang, J.3
Arbing, M.4
Cascio, D.5
Eisenberg, D.6
-
17
-
-
71149087505
-
The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE
-
C. Neubauer, Y.G. Gao, K.R. Andersen, C.M. Dunham, A.C. Kelley, J. Hentschel, K. Gerdes, V. Ramakrishnan, and D.E. Brodersen The structural basis for mRNA recognition and cleavage by the ribosome-dependent endonuclease RelE Cell 139 2009 1084 1095
-
(2009)
Cell
, vol.139
, pp. 1084-1095
-
-
Neubauer, C.1
Gao, Y.G.2
Andersen, K.R.3
Dunham, C.M.4
Kelley, A.C.5
Hentschel, J.6
Gerdes, K.7
Ramakrishnan, V.8
Brodersen, D.E.9
-
18
-
-
47749089764
-
Messenger RNA interferase RelE controls relBE transcription by conditional cooperativity
-
M. Overgaard, J. Borch, M.G. Jorgensen, and K. Gerdes Messenger RNA interferase RelE controls relBE transcription by conditional cooperativity Mol. Microbiol. 69 2008 841 857
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 841-857
-
-
Overgaard, M.1
Borch, J.2
Jorgensen, M.G.3
Gerdes, K.4
-
19
-
-
70350552019
-
RelB and RelE of Escherichia coli form a tight complex that represses transcription via the ribbon-helix-helix motif in RelB
-
M. Overgaard, J. Borch, and K. Gerdes RelB and RelE of Escherichia coli form a tight complex that represses transcription via the ribbon-helix-helix motif in RelB J. Mol. Biol. 394 2009 183 196
-
(2009)
J. Mol. Biol.
, vol.394
, pp. 183-196
-
-
Overgaard, M.1
Borch, J.2
Gerdes, K.3
-
20
-
-
0037428226
-
The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site
-
K. Pedersen, A.V. Zavialov, M.Y. Pavlov, J. Elf, K. Gerdes, and M. Ehrenberg The bacterial toxin RelE displays codon-specific cleavage of mRNAs in the ribosomal A site Cell 112 2003 131 140
-
(2003)
Cell
, vol.112
, pp. 131-140
-
-
Pedersen, K.1
Zavialov, A.V.2
Pavlov, M.Y.3
Elf, J.4
Gerdes, K.5
Ehrenberg, M.6
-
21
-
-
0033212804
-
The Rossmann Fourier autoindexing algorithm in MOSFLM
-
H.R. Powell The Rossmann Fourier autoindexing algorithm in MOSFLM Acta Crystallogr. D Biol. Crystallogr. 55 1999 1690 1695
-
(1999)
Acta Crystallogr. D Biol. Crystallogr.
, vol.55
, pp. 1690-1695
-
-
Powell, H.R.1
-
22
-
-
0028177303
-
DNA recognition by beta-sheets in the Arc repressor-operator crystal structure
-
B.E. Raumann, M.A. Rould, C.O. Pabo, and R.T. Sauer DNA recognition by beta-sheets in the Arc repressor-operator crystal structure Nature 367 1994 754 757
-
(1994)
Nature
, vol.367
, pp. 754-757
-
-
Raumann, B.E.1
Rould, M.A.2
Pabo, C.O.3
Sauer, R.T.4
-
23
-
-
34548046005
-
Ribbon-helix-helix transcription factors: Variations on a theme
-
E.R. Schreiter, and C.L. Drennan Ribbon-helix-helix transcription factors: variations on a theme Nat. Rev. Microbiol. 5 2007 710 720
-
(2007)
Nat. Rev. Microbiol.
, vol.5
, pp. 710-720
-
-
Schreiter, E.R.1
Drennan, C.L.2
-
24
-
-
0034009520
-
Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling
-
P. Schuck Size-distribution analysis of macromolecules by sedimentation velocity ultracentrifugation and lamm equation modeling Biophys. J. 78 2000 1606 1619
-
(2000)
Biophys. J.
, vol.78
, pp. 1606-1619
-
-
Schuck, P.1
-
25
-
-
75649151032
-
Xia2: An expert system for macromolecular crystallography data reduction
-
G. Winter xia2: an expert system for macromolecular crystallography data reduction J. Appl. Cryst. 43 2010 186 190
-
(2010)
J. Appl. Cryst.
, vol.43
, pp. 186-190
-
-
Winter, G.1
|