메뉴 건너뛰기




Volumn 28, Issue 19, 2012, Pages 2548-2550

SQID-XLink: Implementation of an intensity-incorporated algorithm for cross-linked peptide identification

Author keywords

[No Author keywords available]

Indexed keywords

PEPTIDE;

EID: 84867315928     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/bts442     Document Type: Article
Times cited : (9)

References (9)
  • 1
    • 3142702204 scopus 로고    scopus 로고
    • TANDEM: matching proteins with tandem mass spectra
    • Craig,R. and Beavis,R.C. (2004) TANDEM: matching proteins with tandem mass spectra. Bioinformatics, 20, 1466-1467.
    • (2004) Bioinformatics , vol.20 , pp. 1466-1467
    • Craig, R.1    Beavis, R.C.2
  • 2
    • 0000857494 scopus 로고
    • An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database
    • Eng,J.K. et al. (1994) An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database. J. Am. Soc. Mass Spectrom, 5, 976-989.
    • (1994) J. Am. Soc. Mass Spectrom , vol.5 , pp. 976-989
    • Eng, J.K.1
  • 3
    • 47549096059 scopus 로고    scopus 로고
    • Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes
    • Lee,Y.J. (2008) Mass spectrometric analysis of cross-linking sites for the structure of proteins and protein complexes. Mol. BioSyst., 4, 816-823.
    • (2008) Mol. BioSyst. , vol.4 , pp. 816-823
    • Lee, Y.J.1
  • 4
    • 79953676624 scopus 로고    scopus 로고
    • SQID: an intensity-incorporated protein identification algorithm for tandem mass spectrometry
    • Li,W. et al. (2011) SQID: an intensity-incorporated protein identification algorithm for tandem mass spectrometry. J. Proteome Res., 10, 1593-1602.
    • (2011) J. Proteome Res. , vol.10 , pp. 1593-1602
    • Li, W.1
  • 5
    • 38349037648 scopus 로고    scopus 로고
    • Structural analysis of multiprotein complexes by crosslinking, mass spectrometry, and database searching
    • Maiolica,A. et al. (2007) Structural analysis of multiprotein complexes by crosslinking, mass spectrometry, and database searching. Mol Cell Proteomics., 6, 2200-2211.
    • (2007) Mol Cell Proteomics , vol.6 , pp. 2200-2211
    • Maiolica, A.1
  • 6
    • 77952051957 scopus 로고    scopus 로고
    • Detecting cross-linked peptides by searching against a database of cross-linked peptide pairs
    • McIlwain,S. et al. (2010) Detecting cross-linked peptides by searching against a database of cross-linked peptide pairs. J Proteome Res., 9, 2488-2495.
    • (2010) J Proteome Res , vol.9 , pp. 2488-2495
    • McIlwain, S.1
  • 7
    • 41449110185 scopus 로고    scopus 로고
    • Identification of cross-linked peptides from large sequence databases
    • Rinner,O. et al. (2008) Identification of cross-linked peptides from large sequence databases. Nat. Methods, 5, 315-318.
    • (2008) Nat. Methods , vol.5 , pp. 315-318
    • Rinner, O.1
  • 8
    • 56449103302 scopus 로고    scopus 로고
    • Characterization of protein cross-links via mass spectrometry and an open-modification search strategy
    • Singh,P. et al. (2008) Characterization of protein cross-links via mass spectrometry and an open-modification search strategy. Anal. Chem., 80, 8799-8806.
    • (2008) Anal. Chem. , vol.80 , pp. 8799-8806
    • Singh, P.1
  • 9
    • 0347286732 scopus 로고    scopus 로고
    • Chemical cross-linking and mass spectrometry for mapping three-dimensional structures of proteins and protein complexes
    • Sinz,A. et al. (2003) Chemical cross-linking and mass spectrometry for mapping three-dimensional structures of proteins and protein complexes. J. Mass Spectrom., 38, 1225-1237.
    • (2003) J. Mass Spectrom. , vol.38 , pp. 1225-1237
    • Sinz, A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.