Isolation of the Pandemic (H1N1) 2009 virus and its reassortant with an H3N2 swine influenza virus from healthy weaning pigs in Thailand in 2011

Virus Research

Volumn 169, Issue 1, 2012, Pages 175-181

  Hiromoto, Yasuaki ^a,b   Parchariyanon, Sujira ^c   Ketusing, Naree ^c   Netrabukkana, Punnaporn ^d   Hayashi, Tsuyoshi ^a,b   Kobayashi, Tomoko ^a,b   Takemae, Nobuhiro ^a,b   Saito, Takehiko ^a,b  

^a Zoonotic Diseases Collaboration Center ZDCC   (Thailand)

^b NATIONAL INSTITUTE OF ANIMAL HEALTH   (Japan)

^c NATIONAL INSTITUTE OF ANIMAL HEALTH   (Thailand)

^d MURDOCH UNIVERSITY   (Australia)

Author keywords

Influenza; Pandemic (H1N1) 2009; Reassortant; Swine; Thailand

Indexed keywords

VIRUS HEMAGGLUTININ; VIRUS SIALIDASE;

AMINO ACID SEQUENCE; ANIMAL CELL; ANTIGENICITY; ARTICLE; CHICK EMBRYO; EMBRYO; GENE AMPLIFICATION; HA GENE; INFLUENZA VIRUS A H1N1; INFLUENZA VIRUS A H3N2; NA GENE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SWINE; THAILAND; VIRUS GENE; VIRUS ISOLATION; VIRUS STRAIN;

ANIMALS; CELL LINE; CHICK EMBRYO; CHICKENS; DOGS; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; INFLUENZA A VIRUS, H1N1 SUBTYPE; INFLUENZA A VIRUS, H3N2 SUBTYPE; MOLECULAR SEQUENCE DATA; NEURAMINIDASE; NOSE; REASSORTANT VIRUSES; RNA, VIRAL; SEQUENCE ANALYSIS, DNA; SWINE; THAILAND; VIRAL PROTEINS; VIRUS CULTIVATION;

INFLUENZA A VIRUS; SIMIAN IMMUNODEFICIENCY VIRUS; SUIDAE; SWINE INFLUENZA VIRUS;

EID: 84867204666     PISSN: 01681702     EISSN: 18727492     Source Type: Journal    
DOI: 10.1016/j.virusres.2012.07.025     Document Type: Article

References (44)

1. Brown I.H. The epidemiology and evolution of influenza viruses in pigs. Veterinary Microbiology 2000, 74(1-2):29-46.
2. CDC, 2011. CDC Online Newsroom, (last accessed 01.02.12.). http://www.cdc.gov/media/haveyouheard/stories/pdf/reassortmentFlu.pdf.
3. CDC, 2012. Reported Human Infections with Variant Influenza Viruses in the United States since 2005. (last accessed 01.02.12.). http://www.cdc.gov/flu/swineflu/variant-cases-us.htm.
4. Chiapponi C., Zanni I., Garbarino C., Barigazzi G., Foni E. Comparison of the usefulness of the CACO-2 cell line with standard substrates for isolation of swine influenza A viruses. Journal of Virological Methods 2010, 163(1):162-165.
5. Dawood F.S., Jain S., Finelli L., Shaw M.W., Lindstrom S., Garten R.J., Gubareva L.V., Xu X., Bridges C.B., Uyeki T.M. Emergence of a novel swine-origin influenza A (H1N1) virus in humans. New England Journal of Medicine 2009, 360(25):2605-2615.
6. de Jong J.C., Smith D.J., Lapedes A.S., Donatelli I., Campitelli L., Barigazzi G., van Reeth K., Jones T.C., Rimmelzwaan G.F., Osterhaus A.D.M.E., Fouchier R.A.M. Antigenic and genetic evolution of swine influenza A(H3N2) viruses in Europe. Journal of Virology 2007, 81(8):4315-4322.
7. Ducatez M.F., Hause B., Stigger-Rosser E., Darnell D., Corzo C., Juleen K., Simonson R., Brockwell-Staats C., Rubrum A., Wang D., Webb A., Crumpton J.C., Lowe J., Gramer M., Webby R.J. Multiple reassortment between Pandemic (H1N1) 2009 and endemic influenza viruses in pigs, United States. Emerging Infectious Diseases 2011, 17(9):1624-1629.
8. Fan X., Zhu H., Zhou B., Smith D.K., Chen X., Lam T.T., Poon L.L., Peiris M., Guan Y. Emergence and dissemination of a swine H3N2 reassortant influenza virus with 2009 Pandemic H1N1 genes in pigs in China. Journal of Virology 2012, 86(4):2375-2378.
9. Garten R.J., Davis C.T., Russell C.A., Shu B., Lindstrom S., Balish A., Sessions W.M., Xu X., Skepner E., Deyde V., Okomo-Adhiambo M., Gubareva L., Barnes J., Smith C.B., Emery S.L., Hillman M.J., Rivailler P., Smagala J., de Graaf M., Burke D.F., Fouchier R.A., Pappas C., Alpuche-Aranda C.M., Lopez-Gatell H., Olivera H., Lopez I., Myers C.A., Faix D., Blair P.J., Yu C., Keene K.M., Dotson P.D., Boxrud D., Sambol A.R., Abid S.H., St George K., Bannerman T., Moore A.L., Stringer D.J., Blevins P., Demmler-Harrison G.J., Ginsberg M., Kriner P., Waterman S., Smole S., Guevara H.F., Belongia E.A., Clark P.A., Beatrice S.T., Donis R., Katz J., Finelli L., Bridges C.B., Shaw M., Jernigan D.B., Uyeki T.M., Smith D.J., Klimov A.I., Cox N.J. Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science 2009, 325(5937):197-201.
10. Gubareva L.V. Molecular mechanisms of influenza virus resistance to neuraminidase inhibitors. Virus Research 2004, 103(1-2):199-203.
11. Hamilton S.B., Wyatt D.E., Wahlgren B.T., O'Dowd M.K., Morrissey J.M., Daniels D.E., Lednicky J.A. Higher titers of some H5N1 and recent human H1N1 and H3N2 influenza viruses in Mv1 Lu vs. MDCK cells. Virology Journal 2011, 8:66.
12. Hoffmann E., Stech J., Guan Y., Webster R.G., Perez D.R. Universal primer set for the full-length amplification of all influenza A viruses. Archives of Virology 2001, 146(12):2275-2289.
13. Howard W.A., Essen S.C., Strugnell B.W., Russell C., Barass L., Reid S.M., Brown I.H. Reassortant Pandemic (H1N1) 2009 virus in pigs, United Kingdom. Emerging Infectious Diseases 2011, 17(6):1049-1052.
14. Howden K.J., Brockhoff E.J., Caya F.D., McLeod L.J., Lavoie M., Ing J.D., Bystrom J.M., Alexandersen S., Pasick J.M., Berhane Y., Morrison M.E., Keenliside J.M., Laurendeau S., Rohonczy E.B. An investigation into human pandemic influenza virus (H1N1) 2009 on an Alberta swine farm. Canadian Veterinary Journal 2009, 50(11):1153-1161.
15. Ito T., Couceiro J.N., Kelm S., Baum L.G., Krauss S., Castrucci M.R., Donatelli I., Kida H., Paulson J.C., Webster R.G., Kawaoka Y. Molecular basis for the generation in pigs of influenza A viruses with pandemic potential. Journal of Virology 1998, 72(9):7367-7373.
16. Kitikoon P., Sreta D., Na Ayudhya S.N., Wongphatcharachai M., Lapkuntod J., Prakairungnamthip D., Bunpapong N., Suradhat S., Thanawongnuwech R., Amonsin A. Molecular characterization of a novel reassorted pandemic H1N1 2009 in Thai pigs. Virus Genes 2011, 43(1):1-5.
17. Kitikoon P., Sreta D., Tuanudom R., Amonsin A., Suradhat S., Oraveerakul K., Poovorawan Y., Thanawongnuwech R. Serological evidence of pig-to-human influenza virus transmission on Thai swine farms. Veterinary Microbiology 2011, 148(2-4):413-418.
18. Kitikoon P., Vincent A.L., Gauger P.C., Schlink S.N., Bayles D.O., Gramer M.R., Darnell D., Webby R.J., Lager K.M., Swenson S.L., Klimov A. Pathogenicity and transmission in pigs of the novel A(H3N2)v influenza virus isolated from humans and characterization of swine H3N2 viruses isolated in 2010-2011. Journal of Virology 2012, 86(12):6804-6814.
19. Komadina N., Roque V., Thawatsupha P., Rimando-Magalong J., Waicharoen S., Bomasang E., Sawanpanyalert P., Rivera M., Iannello P., Hurt A.C., Barr I.G. Genetic analysis of two influenza A (H1) swine viruses isolated from humans in Thailand and the Philippines. Virus Genes 2007, 35(2):161-165.
20. Li I.W., Chan K.H., To K.W., Wong S.S., Ho P.L., Lau S.K., Woo P.C., Tsoi H.W., Chan J.F., Cheng V.C., Zheng B.J., Chen H., Yuen K.Y. Differential susceptibility of different cell lines to swine-origin influenza A H1N1, seasonal human influenza A H1N1, and avian influenza A H5N1 viruses. Journal of Clinical Virology 2009, 46(4):325-330.
21. Lin D., Sun S., Du L., Ma J., Fan L., Pu J., Sun Y., Zhao J., Sun H., Liu J. Natural and experimental infection of dogs with pandemic H1N1/2009 influenza virus. Journal of General Virology 2012, 93(Pt. 1):119-123.
22. Liu Q., Ma J., Liu H., Qi W., Anderson J., Henry S.C., Hesse R.A., Richt J.A., Ma W. Emergence of novel reassortant H3N2 swine influenza viruses with the 2009 pandemic H1N1 genes in the United States. Archives of Virology 2012, 157:555-562.
23. Mathieu C., Moreno V., Retamal P., Gonzalez A., Rivera A., Fuller J., Jara C., Lecocq C., Rojas M., Garcia A., Vasquez M., Agredo M., Gutierrez C., Escobar H., Fasce R., Mora J., Garcia J., Fernandez J., Ternicier C., Avalos P. Pandemic (H1N1) 2009 in breeding turkeys, Valparaiso, Chile. Emerging Infectious Diseases 2010, 16(4):709-711.
24. Moreno A., Di Trani L., Faccini S., Vaccari G., Nigrelli D., Boniotti M.B., Falcone E., Boni A., Chiapponi C., Sozzi E., Cordioli P. Novel H1N2 swine influenza reassortant strain in pigs derived from the pandemic H1N1/2009 virus. Veterinary Microbiology 2011, 149(3-4):472-477.
25. Myers K.P., Olsen C.W., Gray G.C. Cases of swine influenza in humans: a review of the literature. Clinical Infectious Diseases 2007, 44(8):1084-1088.
26. Nfon C.K., Berhane Y., Hisanaga T., Zhang S., Handel K., Kehler H., Labrecque O., Lewis N.S., Vincent A.L., Copps J., Alexandersen S., Pasick J. Characterization of H1N1 swine influenza viruses circulating in Canadian pigs in 2009. Journal of Virology 2011, 85(17):8667-8679.
27. Ngo L.T., Hiromoto Y., Pham V.P., Le H.T., Nguyen H.T., Le V.T., Takemae N., Saito T. Isolation of novel triple-reassortant swine H3N2 influenza viruses possessing the hemagglutinin and neuraminidase genes of a seasonal influenza virus in Vietnam in 2010. Influenza and Other Respiratory Viruses 2012, 6(1):6-10.
28. OIE, 2010. Terrestrial Manual 2010. http://www.oie.int/fileadmin/Home/eng/Health_standards/tahm/2.08.08_SWINE_INFLUENZA.pdf.
29. Shinde V., Bridges C.B., Uyeki T.M., Shu B., Balish A., Xu X., Lindstrom S., Gubareva L.V., Deyde V., Garten R.J., Harris M., Gerber S., Vagasky S., Smith F., Pascoe N., Martin K., Dufficy D., Ritger K., Conover C., Quinlisk P., Klimov A., Bresee J.S., Finelli L. Triple-reassortant swine influenza A (H1) in humans in the United States, 2005-009. New England Journal of Medicine 2009, 360(25):2616-2625.
30. Smith G.J., Vijaykrishna D., Bahl J., Lycett S.J., Worobey M., Pybus O.G., Ma S.K., Cheung C.L., Raghwani J., Bhatt S., Peiris J.S., Guan Y., Rambaut A. Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature 2009, 459(7250):1122-1125.
31. Sreta D., Tantawet S., Na Ayudhya S.N., Thontiravong A., Wongphatcharachai M., Lapkuntod J., Bunpapong N., Tuanudom R., Suradhat S., Vimolket L., Poovorawan Y., Thanawongnuwech R., Amonsin A., Kitikoon P. Pandemic (H1N1) 2009 virus on commercial swine farm, Thailand. Emerging Infectious Diseases 2010, 16(10):1587-1590.
32. Starick E., Lange E., Fereidouni S., Bunzenthal C., Hoveler R., Kuczka A., grosse Beilage E., Hamann H.P., Klingelhofer I., Steinhauer D., Vahlenkamp T., Beer M., Harder T. Reassorted pandemic (H1N1) 2009 influenza A virus discovered from pigs in Germany. Journal of General Virology 2011, 92(Pt. 5):1184-1188.
33. Takemae N., Parchariyanon S., Damrongwatanapokin S., Uchida Y., Ruttanapumma R., Watanabe C., Yamaguchi S., Saito T. Genetic diversity of swine influenza viruses isolated from pigs during 2000-2005 in Thailand. Influenza and Other Respiratory Viruses 2008, 2(5):181-189.
34. Takemae N., Parchariyanon S., Ruttanapumma R., Hiromoto Y., Hayashi T., Uchida Y., Saito T. Swine influenza virus infection in different age groups of pigs in farrow-to-finish farms in Thailand. Virology Journal 2011, 8(1):537.
35. Takemae N., Ruttanapumma R., Parchariyanon S., Yoneyama S., Hayashi T., Hiramatsu H., Sriwilaijaroen N., Uchida Y., Kondo S., Yagi H., Kato K., Suzuki Y., Saito T. Alterations in receptor-binding properties of swine influenza viruses of the H1 subtype after isolation in embryonated chicken eggs. Journal of General Virology 2010, 91(Pt. 4):938-948.
36. Thrusfield M. Veterinary Epidemiology 1995, Blackwell Science Ltd., Oxford. 2nd ed.
37. Tremblay D., Allard V., Doyon J.F., Bellehumeur C., Spearman J.G., Harel J., Gagnon C.A. Emergence of a new swine H3N2 and pandemic (H1N1) 2009 influenza A virus reassortant in two Canadian animal populations, mink and swine. Journal of Clinical Microbiology 2011, 49(12):4386-4390.
38. Vijaykrishna D., Poon L.L., Zhu H.C., Ma S.K., Li O.T., Cheung C.L., Smith G.J., Peiris J.S., Guan Y. Reassortment of pandemic H1N1/2009 influenza A virus in swine. Science 2010, 328(5985):1529.
39. Vincent A.L., Ma W., Lager K.M., Janke B.H., Richt J.A. Swine influenza viruses a North American perspective. Advances in Virus Research 2008, 72:127-154.
40. Webby R.J., Swenson S.L., Krauss S.L., Gerrish P.J., Goyal S.M., Webster R.G. Evolution of swine H3N2 influenza viruses in the United States. Journal of Virology 2000, 74(18):8243-8251.
41. Webster R.G., Bean W.J., Gorman O.T., Chambers T.M., Kawaoka Y. Evolution and ecology of influenza A viruses. Microbiological Reviews 1992, 56(1):152-179.
42. Welsh M.D., Baird P.M., Guelbenzu-Gonzalo M.P., Hanna A., Reid S.M., Essen S., Russell C., Thomas S., Barrass L., McNeilly F., McKillen J., Todd D., Harkin V., McDowell S., Choudhury B., Irvine R.M., Borobia J., Grant J., Brown I.H. Initial incursion of pandemic (H1N1) 2009 influenza A virus into European pigs. Veterinary Record 2010, 166(21):642-645.
43. Wiley D.C., Skehel J.J. The structure and function of the hemagglutinin membrane glycoprotein of influenza virus. Annual Review of Biochemistry 1987, 56:365-394.
44. World Health Organization, 2002. Identification of Influenza Isolates by Hemagglutination Inhibition, WHO Manual on Animal Influenza Diagnosis and Surveillance, http://www.who.int/vaccine_research/diseases/influenza/WHO_manual_on_animal-diagnosis_and_surveillance_2002_5.pdf.