-
1
-
-
65249173472
-
Carbon catabolite control of the metabolic network in Bacillus subtilis
-
10.1271/bbb.80479, 19202299
-
Fujita Y. Carbon catabolite control of the metabolic network in Bacillus subtilis. Biosci Biotechnol Biochem 2009, 73:245-259. 10.1271/bbb.80479, 19202299.
-
(2009)
Biosci Biotechnol Biochem
, vol.73
, pp. 245-259
-
-
Fujita, Y.1
-
2
-
-
0026033650
-
Catabolite repression of α amylase gene expression in Bacillus subtilis involves a trans-acting gene product homologous to the Escherichia coli lacl and galR repressors
-
10.1111/j.1365-2958.1991.tb00728.x, 1904524
-
Henkin TM, Grundy FJ, Nicholson WL, Chambliss GH. Catabolite repression of α amylase gene expression in Bacillus subtilis involves a trans-acting gene product homologous to the Escherichia coli lacl and galR repressors. Mol Microbiol 1991, 5:575-584. 10.1111/j.1365-2958.1991.tb00728.x, 1904524.
-
(1991)
Mol Microbiol
, vol.5
, pp. 575-584
-
-
Henkin, T.M.1
Grundy, F.J.2
Nicholson, W.L.3
Chambliss, G.H.4
-
3
-
-
36248971737
-
Control of key metabolic intersections in Bacillus subtilis
-
10.1038/nrmicro1772, 17982469
-
Sonenshein AL. Control of key metabolic intersections in Bacillus subtilis. Nat Rev Microbiol 2007, 5:917-927. 10.1038/nrmicro1772, 17982469.
-
(2007)
Nat Rev Microbiol
, vol.5
, pp. 917-927
-
-
Sonenshein, A.L.1
-
4
-
-
0028099341
-
Possible function and some properties of the CcpA protein of Bacillus subtilis
-
10.1099/00221287-140-10-2567, 8000527
-
Miwa Y, Saikawa M, Fujita Y. Possible function and some properties of the CcpA protein of Bacillus subtilis. Microbiology 1994, 140:2567-2575. 10.1099/00221287-140-10-2567, 8000527.
-
(1994)
Microbiology
, vol.140
, pp. 2567-2575
-
-
Miwa, Y.1
Saikawa, M.2
Fujita, Y.3
-
5
-
-
4544356004
-
Structural basis for allosteric control of the transcription regulator CcpA by the phosphoprotein HPr-Ser46-P
-
10.1016/j.cell.2004.08.027, 15369672
-
Schumacher MA, Allen GS, Diel M, Seidel G, Hillen W, Brennan RG. Structural basis for allosteric control of the transcription regulator CcpA by the phosphoprotein HPr-Ser46-P. Cell 2004, 118:731-741. 10.1016/j.cell.2004.08.027, 15369672.
-
(2004)
Cell
, vol.118
, pp. 731-741
-
-
Schumacher, M.A.1
Allen, G.S.2
Diel, M.3
Seidel, G.4
Hillen, W.5
Brennan, R.G.6
-
6
-
-
0028364161
-
Loss of protein kinase-catalyzed phosphorylation of HPr, a phosphocarrier protein of the phosphotransferase system, by mutation of the ptsH gene confers catabolite repression resistance to several catabolic genes of Bacillus subtilis
-
205505, 8195089
-
Deutscher J, Reizer J, Fischer C, Galinier A, Saier MH, Steinmetz M. Loss of protein kinase-catalyzed phosphorylation of HPr, a phosphocarrier protein of the phosphotransferase system, by mutation of the ptsH gene confers catabolite repression resistance to several catabolic genes of Bacillus subtilis. J Bacteriol 1994, 176:3336-3344. 205505, 8195089.
-
(1994)
J Bacteriol
, vol.176
, pp. 3336-3344
-
-
Deutscher, J.1
Reizer, J.2
Fischer, C.3
Galinier, A.4
Saier, M.H.5
Steinmetz, M.6
-
7
-
-
0028827880
-
Specific recognition of the Bacillus subtilis gntcis-acting catabolite-responsive element by a protein complex formed between CcpA and seryl-phosphorylated HPr
-
10.1111/j.1365-2958.1995.mmi_17050953.x, 8596444
-
Fujita Y, Miwa Y, Galinier A, Deutscher J. Specific recognition of the Bacillus subtilis gntcis-acting catabolite-responsive element by a protein complex formed between CcpA and seryl-phosphorylated HPr. Mol Microbiol 1995, 17:953-960. 10.1111/j.1365-2958.1995.mmi_17050953.x, 8596444.
-
(1995)
Mol Microbiol
, vol.17
, pp. 953-960
-
-
Fujita, Y.1
Miwa, Y.2
Galinier, A.3
Deutscher, J.4
-
8
-
-
0030806267
-
The Bacillus subtilis crh gene encodes a HPr-like protein involved in carbon catabolite repression
-
10.1073/pnas.94.16.8439, 22949, 9237995
-
Galinier A, Haiech J, Kilhoffer M-C, Jaquinod M, Stülke J, Deutscher J, Martin-Verstraete I. The Bacillus subtilis crh gene encodes a HPr-like protein involved in carbon catabolite repression. Proc Natl Acad Sci U S A 1997, 94:8439-8444. 10.1073/pnas.94.16.8439, 22949, 9237995.
-
(1997)
Proc Natl Acad Sci U S A
, vol.94
, pp. 8439-8444
-
-
Galinier, A.1
Haiech, J.2
Kilhoffer, M.-C.3
Jaquinod, M.4
Stülke, J.5
Deutscher, J.6
Martin-Verstraete, I.7
-
9
-
-
55749096932
-
Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources
-
10.1128/JB.00848-08, 2580719, 18757537
-
Singh KD, Schmalisch MH, Stülke J, Görke B. Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources. J Bacteriol 2008, 190:7275-7284. 10.1128/JB.00848-08, 2580719, 18757537.
-
(2008)
J Bacteriol
, vol.190
, pp. 7275-7284
-
-
Singh, K.D.1
Schmalisch, M.H.2
Stülke, J.3
Görke, B.4
-
10
-
-
84855493561
-
Carbon source control of the phosphorylation state of the Bacillus subtilis carbon-flux regulator Crh in vivo
-
10.1111/j.1574-6968.2011.02456.x, 22092971
-
Landmann JJ, Werner S, Hillen W, Stülke J, Görke B. Carbon source control of the phosphorylation state of the Bacillus subtilis carbon-flux regulator Crh in vivo. FEMS Microbiol Lett 2012, 327:47-53. 10.1111/j.1574-6968.2011.02456.x, 22092971.
-
(2012)
FEMS Microbiol Lett
, vol.327
, pp. 47-53
-
-
Landmann, J.J.1
Werner, S.2
Hillen, W.3
Stülke, J.4
Görke, B.5
-
11
-
-
2342494366
-
Drastic differences in Crh and HPr synthesis levels reflect their different impacts on catabolite repression in Bacillus subtilis
-
10.1128/JB.186.10.2992-2995.2004, 400640, 15126459
-
Görke B, Fraysse L, Galinier A. Drastic differences in Crh and HPr synthesis levels reflect their different impacts on catabolite repression in Bacillus subtilis. J Bacteriol 2004, 186:2992-2995. 10.1128/JB.186.10.2992-2995.2004, 400640, 15126459.
-
(2004)
J Bacteriol
, vol.186
, pp. 2992-2995
-
-
Görke, B.1
Fraysse, L.2
Galinier, A.3
-
12
-
-
0034695574
-
The HPr kinase from Bacillus subtilis is a homo-oligomeric enzyme which exhibits strong positive cooperativity for nucleotide and fructose 1,6-bisphosphate binding
-
10.1074/jbc.275.3.1773, 10636874
-
Jault J-M, Fieulaine S, Nessler S, Gonzalo P, Di Pietro A, Deutscher J, Galinier A. The HPr kinase from Bacillus subtilis is a homo-oligomeric enzyme which exhibits strong positive cooperativity for nucleotide and fructose 1,6-bisphosphate binding. J Biol Chem 2000, 275:1773-1780. 10.1074/jbc.275.3.1773, 10636874.
-
(2000)
J Biol Chem
, vol.275
, pp. 1773-1780
-
-
Jault, J.-M.1
Fieulaine, S.2
Nessler, S.3
Gonzalo, P.4
Di Pietro, A.5
Deutscher, J.6
Galinier, A.7
-
13
-
-
0037478850
-
HPr kinase/phosphorylase, the sensor enzyme of catabolite repression in Gram-positive bacteria: structural aspects of the enzyme and the complex with its protein substrate
-
10.1128/JB.185.14.4003-4010.2003, 164879, 12837773
-
Nessler S, Fieulaine S, Poncet S, Galinier A, Deutscher J, Janin J. HPr kinase/phosphorylase, the sensor enzyme of catabolite repression in Gram-positive bacteria: structural aspects of the enzyme and the complex with its protein substrate. J Bacteriol 2003, 185:4003-4010. 10.1128/JB.185.14.4003-4010.2003, 164879, 12837773.
-
(2003)
J Bacteriol
, vol.185
, pp. 4003-4010
-
-
Nessler, S.1
Fieulaine, S.2
Poncet, S.3
Galinier, A.4
Deutscher, J.5
Janin, J.6
-
14
-
-
0028917215
-
Protein kinase-dependent HPr/CcpA interaction links glycolytic activity to carbon catabolite repression in Gram-positive bacteria
-
10.1111/j.1365-2958.1995.tb02280.x, 7623661
-
Deutscher J, Küster E, Bergstedt U, Charrier V, Hillen W. Protein kinase-dependent HPr/CcpA interaction links glycolytic activity to carbon catabolite repression in Gram-positive bacteria. Mol Microbiol 1995, 15:1049-1053. 10.1111/j.1365-2958.1995.tb02280.x, 7623661.
-
(1995)
Mol Microbiol
, vol.15
, pp. 1049-1053
-
-
Deutscher, J.1
Küster, E.2
Bergstedt, U.3
Charrier, V.4
Hillen, W.5
-
15
-
-
0031557402
-
Cooperative and non-cooperative DNA binding modes of catabolite control protein CcpA from Bacillus megaterium result from sensing two different signals
-
10.1006/jmbi.1996.0820, 9102460
-
Gösseringer R, Küster E, Galinier A, Deutscher J, Hillen W. Cooperative and non-cooperative DNA binding modes of catabolite control protein CcpA from Bacillus megaterium result from sensing two different signals. J Mol Biol 1997, 266:665-676. 10.1006/jmbi.1996.0820, 9102460.
-
(1997)
J Mol Biol
, vol.266
, pp. 665-676
-
-
Gösseringer, R.1
Küster, E.2
Galinier, A.3
Deutscher, J.4
Hillen, W.5
-
16
-
-
0032483005
-
NADP, corepressor for the Bacillus catabolite control protein CcpA
-
10.1073/pnas.95.16.9590, 21383, 9689125
-
Kim J-H, Voskuil MI, Chambliss GH. NADP, corepressor for the Bacillus catabolite control protein CcpA. Proc Natl Acad Sci USA 1998, 95:9590-9595. 10.1073/pnas.95.16.9590, 21383, 9689125.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 9590-9595
-
-
Kim, J.-H.1
Voskuil, M.I.2
Chambliss, G.H.3
-
17
-
-
0031733741
-
Transcriptional activation of the Bacillus subtilis ackA gene requires sequences upstream of the promoter
-
107671, 9811655
-
Turinsky AJ, Grundy FJ, Kim J-H, Chambliss GH, Henkin TM. Transcriptional activation of the Bacillus subtilis ackA gene requires sequences upstream of the promoter. J Bacteriol 1998, 180:5961-5967. 107671, 9811655.
-
(1998)
J Bacteriol
, vol.180
, pp. 5961-5967
-
-
Turinsky, A.J.1
Grundy, F.J.2
Kim, J.-H.3
Chambliss, G.H.4
Henkin, T.M.5
-
18
-
-
0032743239
-
Catabolite regulation of the pta gene as part of carbon flow pathways in Bacillus subtilis
-
94162, 10559153
-
Presecan-Siedel E, Galinier A, Longin R, Deutscher J, Danchin A, Glaser P, Martin-Verstraete I. Catabolite regulation of the pta gene as part of carbon flow pathways in Bacillus subtilis. J Bacteriol 1999, 181:6889-6897. 94162, 10559153.
-
(1999)
J Bacteriol
, vol.181
, pp. 6889-6897
-
-
Presecan-Siedel, E.1
Galinier, A.2
Longin, R.3
Deutscher, J.4
Danchin, A.5
Glaser, P.6
Martin-Verstraete, I.7
-
19
-
-
20344400380
-
Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA
-
10.1111/j.1365-2958.2005.04635.x, 15916606
-
Tojo S, Satomura T, Morisaki K, Deutscher J, Hirooka K, Fujita Y. Elaborate transcription regulation of the Bacillus subtilis ilv-leu operon involved in the biosynthesis of branched-chain amino acids through global regulators of CcpA, CodY and TnrA. Mol Microbiol 2005, 56:1560-1573. 10.1111/j.1365-2958.2005.04635.x, 15916606.
-
(2005)
Mol Microbiol
, vol.56
, pp. 1560-1573
-
-
Tojo, S.1
Satomura, T.2
Morisaki, K.3
Deutscher, J.4
Hirooka, K.5
Fujita, Y.6
-
20
-
-
20344374720
-
Bacillus subtilis ilvB operon: an intersection of global regulons
-
10.1111/j.1365-2958.2005.04634.x, 15916605
-
Shivers RP, Sonenshein AL. Bacillus subtilis ilvB operon: an intersection of global regulons. Mol Microbiol 2005, 56:1549-1559. 10.1111/j.1365-2958.2005.04634.x, 15916605.
-
(2005)
Mol Microbiol
, vol.56
, pp. 1549-1559
-
-
Shivers, R.P.1
Sonenshein, A.L.2
-
21
-
-
33750002507
-
Positive regulation of Bacillus subtilis ackA by CodY and CcpA: establishing a potential hierarchy in carbon flow
-
10.1111/j.1365-2958.2006.05410.x, 16995897
-
Shivers RP, Dineen SS, Sonenshein AL. Positive regulation of Bacillus subtilis ackA by CodY and CcpA: establishing a potential hierarchy in carbon flow. Mol Microbiol 2006, 62:811-822. 10.1111/j.1365-2958.2006.05410.x, 16995897.
-
(2006)
Mol Microbiol
, vol.62
, pp. 811-822
-
-
Shivers, R.P.1
Dineen, S.S.2
Sonenshein, A.L.3
-
22
-
-
84861903420
-
CcpA forms complexes with CodY and RpoA in Bacillus subtilis
-
10.1111/j.1742-4658.2012.08604.x, 22512862
-
Wünsche A, Hammer E, Bartholomae M, Völker U, Burkovski A, Seidel G, Hillen W. CcpA forms complexes with CodY and RpoA in Bacillus subtilis. FEBS J 2012, 279:2201-2214. 10.1111/j.1742-4658.2012.08604.x, 22512862.
-
(2012)
FEBS J
, vol.279
, pp. 2201-2214
-
-
Wünsche, A.1
Hammer, E.2
Bartholomae, M.3
Völker, U.4
Burkovski, A.5
Seidel, G.6
Hillen, W.7
-
23
-
-
0035087351
-
Transcriptional activation of the Bacillus subtilis ackA promoter requires sequences upstream of the CcpA binding site
-
10.1128/JB.183.7.2389-2393.2001, 95151, 11244084
-
Moir-Blais TR, Grundy FJ, Henkin TM. Transcriptional activation of the Bacillus subtilis ackA promoter requires sequences upstream of the CcpA binding site. J Bacteriol 2001, 183:2389-2393. 10.1128/JB.183.7.2389-2393.2001, 95151, 11244084.
-
(2001)
J Bacteriol
, vol.183
, pp. 2389-2393
-
-
Moir-Blais, T.R.1
Grundy, F.J.2
Henkin, T.M.3
-
24
-
-
0028859554
-
Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon
-
177561, 7592486
-
Martin-Verstraete I, Stülke J, Klier A, Rapoport G. Two different mechanisms mediate catabolite repression of the Bacillus subtilis levanase operon. J Bacteriol 1995, 177:6919-6927. 177561, 7592486.
-
(1995)
J Bacteriol
, vol.177
, pp. 6919-6927
-
-
Martin-Verstraete, I.1
Stülke, J.2
Klier, A.3
Rapoport, G.4
-
25
-
-
0023579076
-
Catabolite repression-resistant mutations of the Bacillus subtilis α-amylase promoter affect transcription levels and are in an operator-like sequence
-
10.1016/0022-2836(87)90204-X, 3123701
-
Nicholson WL, Park YK, Henkin TM, Won M, Weickert MJ, Gaskell JA, Chambliss GH. Catabolite repression-resistant mutations of the Bacillus subtilis α-amylase promoter affect transcription levels and are in an operator-like sequence. J Mol Biol 1987, 198:609-618. 10.1016/0022-2836(87)90204-X, 3123701.
-
(1987)
J Mol Biol
, vol.198
, pp. 609-618
-
-
Nicholson, W.L.1
Park, Y.K.2
Henkin, T.M.3
Won, M.4
Weickert, M.J.5
Gaskell, J.A.6
Chambliss, G.H.7
-
26
-
-
0029916568
-
Transcriptional analysis of bglPH expression in Bacillus subtilis: evidence for two distinct pathways mediating carbon catabolite repression
-
177989, 8626332
-
Krüger S, Gertz S, Hecker M. Transcriptional analysis of bglPH expression in Bacillus subtilis: evidence for two distinct pathways mediating carbon catabolite repression. J Bacteriol 1996, 178:2637-2644. 177989, 8626332.
-
(1996)
J Bacteriol
, vol.178
, pp. 2637-2644
-
-
Krüger, S.1
Gertz, S.2
Hecker, M.3
-
27
-
-
0035002303
-
Catabolite regulation of the cytochrome c550-encoding Bacillus subtilis cccA gene
-
Monedero V, Boël G, Deutscher J. Catabolite regulation of the cytochrome c550-encoding Bacillus subtilis cccA gene. J Mol Microbiol Biotechnol 2001, 3:433-438.
-
(2001)
J Mol Microbiol Biotechnol
, vol.3
, pp. 433-438
-
-
Monedero, V.1
Boël, G.2
Deutscher, J.3
-
28
-
-
0033968158
-
Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis
-
Asai K, Baik SH, Kasahara Y, Moriya S, Ogasawara N. Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis. Microbiology (Reading, Engl.) 2000, 146(Pt 2):263-271.
-
(2000)
Microbiology (Reading, Engl.)
, vol.146
, Issue.PART 2
, pp. 263-271
-
-
Asai, K.1
Baik, S.H.2
Kasahara, Y.3
Moriya, S.4
Ogasawara, N.5
-
29
-
-
0036227754
-
Antitermination by GlpP, catabolite repression via CcpA and inducer exclusion triggered by P GlpK dephosphorylation control Bacillus subtilis glpFK expression
-
10.1046/j.1365-2958.2002.02800.x, 11929549
-
Darbon E, Servant P, Poncet S, Deutscher J. Antitermination by GlpP, catabolite repression via CcpA and inducer exclusion triggered by P GlpK dephosphorylation control Bacillus subtilis glpFK expression. Mol Microbiol 2002, 43:1039-1052. 10.1046/j.1365-2958.2002.02800.x, 11929549.
-
(2002)
Mol Microbiol
, vol.43
, pp. 1039-1052
-
-
Darbon, E.1
Servant, P.2
Poncet, S.3
Deutscher, J.4
-
30
-
-
32444450897
-
CcpA causes repression of the phoPR promoter through a novel transcription start site, PA6
-
10.1128/JB.188.4.1266-1278.2006, 1367233, 16452408
-
Puri-Taneja A, Paul S, Chen Y, Hulett FM. CcpA causes repression of the phoPR promoter through a novel transcription start site, PA6. J Bacteriol 2006, 188:1266-1278. 10.1128/JB.188.4.1266-1278.2006, 1367233, 16452408.
-
(2006)
J Bacteriol
, vol.188
, pp. 1266-1278
-
-
Puri-Taneja, A.1
Paul, S.2
Chen, Y.3
Hulett, F.M.4
-
31
-
-
0027497020
-
Identification of genes involved in utilization of acetate and acetoin in Bacillus subtilis
-
10.1111/j.1365-2958.1993.tb01952.x, 7934817
-
Grundy FJ, Waters DA, Takova TY, Henkin TM. Identification of genes involved in utilization of acetate and acetoin in Bacillus subtilis. Mol Microbiol 1993, 10:259-271. 10.1111/j.1365-2958.1993.tb01952.x, 7934817.
-
(1993)
Mol Microbiol
, vol.10
, pp. 259-271
-
-
Grundy, F.J.1
Waters, D.A.2
Takova, T.Y.3
Henkin, T.M.4
-
32
-
-
0025071837
-
Site-directed mutagenesis of a catabolite repression operator sequence in Bacillus subtilis
-
10.1073/pnas.87.16.6238, 54508, 2117276
-
Weickert MJ, Chambliss GH. Site-directed mutagenesis of a catabolite repression operator sequence in Bacillus subtilis. Proc Natl Acad Sci U S A 1990, 87:6238-6242. 10.1073/pnas.87.16.6238, 54508, 2117276.
-
(1990)
Proc Natl Acad Sci U S A
, vol.87
, pp. 6238-6242
-
-
Weickert, M.J.1
Chambliss, G.H.2
-
33
-
-
0034159917
-
Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis
-
10.1093/nar/28.5.1206, 102602, 10666464
-
Miwa Y, Nakata A, Ogiwara A, Yamamoto M, Fujita Y. Evaluation and characterization of catabolite-responsive elements (cre) of Bacillus subtilis. Nucleic Acids Res 2000, 28:1206-1210. 10.1093/nar/28.5.1206, 102602, 10666464.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1206-1210
-
-
Miwa, Y.1
Nakata, A.2
Ogiwara, A.3
Yamamoto, M.4
Fujita, Y.5
-
34
-
-
79954607096
-
Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators
-
3074128, 21106498
-
Schumacher MA, Sprehe M, Bartholomae M, Hillen W, Brennan RG. Structures of carbon catabolite protein A-(HPr-Ser46-P) bound to diverse catabolite response element sites reveal the basis for high-affinity binding to degenerate DNA operators. Nucleic Acids Res 2010, 39:2931-2942. 3074128, 21106498.
-
(2010)
Nucleic Acids Res
, vol.39
, pp. 2931-2942
-
-
Schumacher, M.A.1
Sprehe, M.2
Bartholomae, M.3
Hillen, W.4
Brennan, R.G.5
-
35
-
-
13544262411
-
Tetracycline-dependent conditional gene knockout in Bacillus subtilis
-
10.1128/AEM.71.2.728-733.2005, 546824, 15691923
-
Kamionka A, Bertram R, Hillen W. Tetracycline-dependent conditional gene knockout in Bacillus subtilis. Appl Environ Microbiol 2005, 71:728-733. 10.1128/AEM.71.2.728-733.2005, 546824, 15691923.
-
(2005)
Appl Environ Microbiol
, vol.71
, pp. 728-733
-
-
Kamionka, A.1
Bertram, R.2
Hillen, W.3
-
36
-
-
0036856331
-
TonB of Escherichia coli activates FhuA through interaction with the β-barrel
-
Killmann H, Herrmann C, Torun A, Jung G, Braun V. TonB of Escherichia coli activates FhuA through interaction with the β-barrel. Microbiology 2002, 148:3497-3509.
-
(2002)
Microbiology
, vol.148
, pp. 3497-3509
-
-
Killmann, H.1
Herrmann, C.2
Torun, A.3
Jung, G.4
Braun, V.5
-
37
-
-
0030899835
-
Catabolite repression of the Bacillus subtilis gnt operon exerted by two catabolite-responsive elements
-
10.1046/j.1365-2958.1997.2921662.x, 9106211
-
Miwa Y, Nagura K, Eguchi S, Fukuda H, Deutscher J, Fujita Y. Catabolite repression of the Bacillus subtilis gnt operon exerted by two catabolite-responsive elements. Mol Microbiol 1997, 23:1203-1213. 10.1046/j.1365-2958.1997.2921662.x, 9106211.
-
(1997)
Mol Microbiol
, vol.23
, pp. 1203-1213
-
-
Miwa, Y.1
Nagura, K.2
Eguchi, S.3
Fukuda, H.4
Deutscher, J.5
Fujita, Y.6
-
38
-
-
0030057004
-
The role of CcpA transcriptional regulator in carbon metabolism in Bacillus subtilis
-
10.1111/j.1574-6968.1996.tb07959.x, 8598282
-
Henkin TM. The role of CcpA transcriptional regulator in carbon metabolism in Bacillus subtilis. FEMS Microbiol Lett 1996, 135:9-15. 10.1111/j.1574-6968.1996.tb07959.x, 8598282.
-
(1996)
FEMS Microbiol Lett
, vol.135
, pp. 9-15
-
-
Henkin, T.M.1
-
39
-
-
0033582597
-
Phosphorylation of either Crh or HPr mediates binding of CcpA to the Bacillus subtilis xyn cre and catabolite repression of the xyn operon
-
10.1006/jmbi.1998.2492, 9973552
-
Galinier A, Deutscher J, Martin-Verstraete I. Phosphorylation of either Crh or HPr mediates binding of CcpA to the Bacillus subtilis xyn cre and catabolite repression of the xyn operon. J Mol Biol 1999, 286:307-314. 10.1006/jmbi.1998.2492, 9973552.
-
(1999)
J Mol Biol
, vol.286
, pp. 307-314
-
-
Galinier, A.1
Deutscher, J.2
Martin-Verstraete, I.3
-
40
-
-
0035103809
-
Catabolite repression mediated by the CcpA protein in Bacillus subtilis: novel modes of regulation revealed by whole-genome analyses
-
10.1111/j.1365-2958.2001.02328.x, 11251851
-
Moreno MS, Schneider BL, Maile RR, Weyler W, Saier MH. Catabolite repression mediated by the CcpA protein in Bacillus subtilis: novel modes of regulation revealed by whole-genome analyses. Mol Microbiol 2001, 39:1366-1381. 10.1111/j.1365-2958.2001.02328.x, 11251851.
-
(2001)
Mol Microbiol
, vol.39
, pp. 1366-1381
-
-
Moreno, M.S.1
Schneider, B.L.2
Maile, R.R.3
Weyler, W.4
Saier, M.H.5
-
41
-
-
0347126296
-
DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics
-
10.1093/nar/gkh074, 308808, 14681362
-
Makita Y, Nakao M, Ogasawara N, Nakai K. DBTBS: database of transcriptional regulation in Bacillus subtilis and its contribution to comparative genomics. Nucleic Acids Res 2004, 32:D75-D77. 10.1093/nar/gkh074, 308808, 14681362.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Makita, Y.1
Nakao, M.2
Ogasawara, N.3
Nakai, K.4
-
42
-
-
84857672615
-
Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism
-
10.1126/science.1206871, 22383848
-
Buescher JM, Liebermeister W, Jules M, Uhr M, Muntel J, Botella E, Hessling B, Kleijn RJ, Le Chat L, Lecointe F, Mäder U, Nicolas P, Piersma S, Rügheimer F, Becher D, Bessieres P, Bidnenko E, Denham EL, Dervyn E, Devine KM, Doherty G, Drulhe S, Felicori L, Fogg MJ, Goelzer A, Hansen A, Harwood CR, Hecker M, Hubner S, Hultschig C, et al. Global network reorganization during dynamic adaptations of Bacillus subtilis metabolism. Science 2012, 335:1099-1103. 10.1126/science.1206871, 22383848.
-
(2012)
Science
, vol.335
, pp. 1099-1103
-
-
Buescher, J.M.1
Liebermeister, W.2
Jules, M.3
Uhr, M.4
Muntel, J.5
Botella, E.6
Hessling, B.7
Kleijn, R.J.8
Le Chat, L.9
Lecointe, F.10
Mäder, U.11
Nicolas, P.12
Piersma, S.13
Rügheimer, F.14
Becher, D.15
Bessieres, P.16
Bidnenko, E.17
Denham, E.L.18
Dervyn, E.19
Devine, K.M.20
Doherty, G.21
Drulhe, S.22
Felicori, L.23
Fogg, M.J.24
Goelzer, A.25
Hansen, A.26
Harwood, C.R.27
Hecker, M.28
Hubner, S.29
Hultschig, C.30
more..
-
43
-
-
4644279904
-
Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data
-
10.1186/gb-2004-5-5-r37, 416473, 15128451
-
Baerends RJS, Smits WK, de Jong A, Hamoen LW, Kok J, Kuipers OP. Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data. Genome Biol 2004, 5:R37. 10.1186/gb-2004-5-5-r37, 416473, 15128451.
-
(2004)
Genome Biol
, vol.5
-
-
Baerends, R.J.S.1
Smits, W.K.2
de Jong, A.3
Hamoen, L.W.4
Kok, J.5
Kuipers, O.P.6
-
44
-
-
33845765190
-
Transcriptome analysis of temporal regulation of carbon metabolism by CcpA in Bacillus subtilis reveals additional target genes
-
10.1159/000096463, 17183215
-
Lulko AT, Buist G, Kok J, Kuipers OP. Transcriptome analysis of temporal regulation of carbon metabolism by CcpA in Bacillus subtilis reveals additional target genes. J Mol Microbiol Biotechnol 2007, 12:82-95. 10.1159/000096463, 17183215.
-
(2007)
J Mol Microbiol Biotechnol
, vol.12
, pp. 82-95
-
-
Lulko, A.T.1
Buist, G.2
Kok, J.3
Kuipers, O.P.4
-
45
-
-
16244392719
-
Evidence that Bacillus catabolite control protein CcpA interacts with RNA polymerase to inhibit transcription
-
10.1111/j.1365-2958.2005.04496.x, 15773986
-
Kim J-H, Yang Y-K, Chambliss GH. Evidence that Bacillus catabolite control protein CcpA interacts with RNA polymerase to inhibit transcription. Mol Microbiol 2005, 56:155-162. 10.1111/j.1365-2958.2005.04496.x, 15773986.
-
(2005)
Mol Microbiol
, vol.56
, pp. 155-162
-
-
Kim, J.-H.1
Yang, Y.-K.2
Chambliss, G.H.3
-
46
-
-
0038267065
-
Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways
-
10.1016/S1096-7176(03)00009-0, 12850135
-
Blencke H-M, Homuth G, Ludwig H, Mäder U, Hecker M, Stülke J. Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways. Metab Eng 2003, 5:133-149. 10.1016/S1096-7176(03)00009-0, 12850135.
-
(2003)
Metab Eng
, vol.5
, pp. 133-149
-
-
Blencke, H.-M.1
Homuth, G.2
Ludwig, H.3
Mäder, U.4
Hecker, M.5
Stülke, J.6
-
47
-
-
0036065304
-
Control of the glycolytic gapA operon by the catabolite control protein A in Bacillus subtilis: a novel mechanism of CcpA-mediated regulation
-
10.1046/j.1365-2958.2002.03034.x, 12123463
-
Ludwig H, Rebhan N, Blencke H-M, Merzbacher M, Stülke J. Control of the glycolytic gapA operon by the catabolite control protein A in Bacillus subtilis: a novel mechanism of CcpA-mediated regulation. Mol Microbiol 2002, 45:543-553. 10.1046/j.1365-2958.2002.03034.x, 12123463.
-
(2002)
Mol Microbiol
, vol.45
, pp. 543-553
-
-
Ludwig, H.1
Rebhan, N.2
Blencke, H.-M.3
Merzbacher, M.4
Stülke, J.5
-
48
-
-
33846916395
-
Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363
-
10.1128/JB.01013-06, 1797362, 17028270
-
Zomer AL, Buist G, Larsen R, Kok J, Kuipers OP. Time-resolved determination of the CcpA regulon of Lactococcus lactis subsp. cremoris MG1363. J Bacteriol 2007, 189:1366-1381. 10.1128/JB.01013-06, 1797362, 17028270.
-
(2007)
J Bacteriol
, vol.189
, pp. 1366-1381
-
-
Zomer, A.L.1
Buist, G.2
Larsen, R.3
Kok, J.4
Kuipers, O.P.5
-
49
-
-
0025953332
-
Catabolite repression of the operon for xylose utilization from Bacillus subtilis W23 is mediated at the level of transcription and depends on a cis site in the xylA reading frame
-
10.1007/BF00272155, 1921970
-
Jacob S, Allmansberger R, Gärtner D, Hillen W. Catabolite repression of the operon for xylose utilization from Bacillus subtilis W23 is mediated at the level of transcription and depends on a cis site in the xylA reading frame. Mol Gen Genet 1991, 229:189-196. 10.1007/BF00272155, 1921970.
-
(1991)
Mol Gen Genet
, vol.229
, pp. 189-196
-
-
Jacob, S.1
Allmansberger, R.2
Gärtner, D.3
Hillen, W.4
-
50
-
-
0031779321
-
Transcription-repair coupling factor is involved in carbon catabolite repression of the Bacillus subtilis hut and gnt operons
-
10.1046/j.1365-2958.1998.00751.x, 9535092
-
Zalieckas JM, Wray J, Ferson AE, Fisher SH. Transcription-repair coupling factor is involved in carbon catabolite repression of the Bacillus subtilis hut and gnt operons. Mol Microbiol 1998, 27:1031-1038. 10.1046/j.1365-2958.1998.00751.x, 9535092.
-
(1998)
Mol Microbiol
, vol.27
, pp. 1031-1038
-
-
Zalieckas, J.M.1
Wray, J.2
Ferson, A.E.3
Fisher, S.H.4
-
51
-
-
0141480274
-
Distinct molecular mechanisms involved in carbon catabolite repression of the arabinose regulon in Bacillus subtilis
-
10.1099/mic.0.26326-0, 12949161
-
Inácio JM, Costa C, de Sá-Nogueira I. Distinct molecular mechanisms involved in carbon catabolite repression of the arabinose regulon in Bacillus subtilis. Microbiology 2003, 149:2345-2355. 10.1099/mic.0.26326-0, 12949161.
-
(2003)
Microbiology
, vol.149
, pp. 2345-2355
-
-
Inácio, J.M.1
Costa, C.2
de Sá-Nogueira, I.3
-
52
-
-
25144520372
-
Regulation of sigL expression by the catabolite control protein CcpA involves a roadblock mechanism in Bacillus subtilis: potential connection between carbon and nitrogen metabolism
-
10.1128/JB.187.19.6856-6861.2005, 1251575, 16166551
-
Choi S-K, Saier MH. Regulation of sigL expression by the catabolite control protein CcpA involves a roadblock mechanism in Bacillus subtilis: potential connection between carbon and nitrogen metabolism. J Bacteriol 2005, 187:6856-6861. 10.1128/JB.187.19.6856-6861.2005, 1251575, 16166551.
-
(2005)
J Bacteriol
, vol.187
, pp. 6856-6861
-
-
Choi, S.-K.1
Saier, M.H.2
-
53
-
-
0032431399
-
Expression of the Bacillus subtilis acsA gene: position and sequence context affect cre-mediated carbon catabolite repression
-
107769, 9852010
-
Zalieckas JM, Wray LV, Fisher SH. Expression of the Bacillus subtilis acsA gene: position and sequence context affect cre-mediated carbon catabolite repression. J Bacteriol 1998, 180:6649-6654. 107769, 9852010.
-
(1998)
J Bacteriol
, vol.180
, pp. 6649-6654
-
-
Zalieckas, J.M.1
Wray, L.V.2
Fisher, S.H.3
-
54
-
-
0028136632
-
Catabolite regulation of Bacillus subtilis acetate and acetoin utilization genes by CcpA
-
196271, 7913927
-
Grundy FJ, Turinsky AJ, Henkin TM. Catabolite regulation of Bacillus subtilis acetate and acetoin utilization genes by CcpA. J Bacteriol 1994, 176:4527-4533. 196271, 7913927.
-
(1994)
J Bacteriol
, vol.176
, pp. 4527-4533
-
-
Grundy, F.J.1
Turinsky, A.J.2
Henkin, T.M.3
-
55
-
-
0029619251
-
Regulation of the putative bglPH operon for aryl-β-glucoside utilization in Bacillus subtilis
-
177369, 7559347
-
Krüger S, Hecker M. Regulation of the putative bglPH operon for aryl-β-glucoside utilization in Bacillus subtilis. J Bacteriol 1995, 177:5590-5597. 177369, 7559347.
-
(1995)
J Bacteriol
, vol.177
, pp. 5590-5597
-
-
Krüger, S.1
Hecker, M.2
-
56
-
-
18944375835
-
Quantitative interdependence of coeffectors, CcpA and cre in carbon catabolite regulation of Bacillus subtilis
-
10.1111/j.1742-4658.2005.04682.x, 15885105
-
Seidel G, Diel M, Fuchsbauer N, Hillen W. Quantitative interdependence of coeffectors, CcpA and cre in carbon catabolite regulation of Bacillus subtilis. FEBS J 2005, 272:2566-2577. 10.1111/j.1742-4658.2005.04682.x, 15885105.
-
(2005)
FEBS J
, vol.272
, pp. 2566-2577
-
-
Seidel, G.1
Diel, M.2
Fuchsbauer, N.3
Hillen, W.4
-
57
-
-
0029590029
-
Antibiotic-resistance cassettes for Bacillus subtilis
-
10.1016/0378-1119(95)00652-4, 8566804
-
Guérout-Fleury AM, Shazand K, Frandsen N, Stragier P. Antibiotic-resistance cassettes for Bacillus subtilis. Gene 1995, 167:335-336. 10.1016/0378-1119(95)00652-4, 8566804.
-
(1995)
Gene
, vol.167
, pp. 335-336
-
-
Guérout-Fleury, A.M.1
Shazand, K.2
Frandsen, N.3
Stragier, P.4
-
58
-
-
28544442715
-
Integrative elements for Bacillus subtilis yielding tetracycline-dependent growth phenotypes
-
10.1093/nar/gni154, 1253839, 16221969
-
Bertram R, Kostner M, Muller J, Vazquez Ramos J, Hillen W. Integrative elements for Bacillus subtilis yielding tetracycline-dependent growth phenotypes. Nucleic Acids Res 2005, 33:e153. 10.1093/nar/gni154, 1253839, 16221969.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Bertram, R.1
Kostner, M.2
Muller, J.3
Vazquez Ramos, J.4
Hillen, W.5
-
59
-
-
0030731108
-
The complete genome sequence of the Gram-positive bacterium Bacillus subtilis
-
10.1038/36786, 9384377
-
Kunst F, Ogasawara N, Moszer I, Albertini AM, Alloni G, Azevedo V, Bertero MG, Bessieres P, Bolotin A, Borchert S, Borriss R, Boursier L, Brans A, Braun M, Brignell SC, Bron S, Brouillet S, Bruschi CV, Caldwell B, Capuano V, Carter NM, Choi SK, Codani JJ, Connerton IF, Danchin A, et al. The complete genome sequence of the Gram-positive bacterium Bacillus subtilis. Nature 1997, 390:249-256. 10.1038/36786, 9384377.
-
(1997)
Nature
, vol.390
, pp. 249-256
-
-
Kunst, F.1
Ogasawara, N.2
Moszer, I.3
Albertini, A.M.4
Alloni, G.5
Azevedo, V.6
Bertero, M.G.7
Bessieres, P.8
Bolotin, A.9
Borchert, S.10
Borriss, R.11
Boursier, L.12
Brans, A.13
Braun, M.14
Brignell, S.C.15
Bron, S.16
Brouillet, S.17
Bruschi, C.V.18
Caldwell, B.19
Capuano, V.20
Carter, N.M.21
Choi, S.K.22
Codani, J.J.23
Connerton, I.F.24
Danchin, A.25
more..
-
60
-
-
0343182993
-
Immunological crossreactivity to the catabolite control protein CcpA Bacillus megaterium is found in many Gram-positive bacteria
-
Küster E, Luesink EJ, de Vos WM, Hillen W. Immunological crossreactivity to the catabolite control protein CcpA Bacillus megaterium is found in many Gram-positive bacteria. FEMS Microbiol Lett 1996, 139:109-115.
-
(1996)
FEMS Microbiol Lett
, vol.139
, pp. 109-115
-
-
Küster, E.1
Luesink, E.J.2
de Vos, W.M.3
Hillen, W.4
-
61
-
-
2642533798
-
MicroPreP: a cDNA microarray data pre-processing framework
-
van Hijum SAFT, García de la Nava J, Trelles O, Kok J, Kuipers OP. MicroPreP: a cDNA microarray data pre-processing framework. Appl Bioinformatics 2003, 2:241-244.
-
(2003)
Appl Bioinformatics
, vol.2
, pp. 241-244
-
-
van Hijum, S.A.F.T.1
García de la Nava, J.2
Trelles, O.3
Kok, J.4
Kuipers, O.P.5
-
62
-
-
0035827588
-
Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12
-
10.1074/jbc.M010192200, 11259426
-
Long AD, Mangalam HJ, Chan BY, Tolleri L, Hatfield GW, Baldi P. Improved statistical inference from DNA microarray data using analysis of variance and a Bayesian statistical framework. Analysis of global gene expression in Escherichia coli K12. J Biol Chem 2001, 276:19937-19944. 10.1074/jbc.M010192200, 11259426.
-
(2001)
J Biol Chem
, vol.276
, pp. 19937-19944
-
-
Long, A.D.1
Mangalam, H.J.2
Chan, B.Y.3
Tolleri, L.4
Hatfield, G.W.5
Baldi, P.6
-
63
-
-
84863111753
-
PePPER: a webserver for prediction of prokaryote promoter elements and regulons
-
10.1186/1471-2164-13-299, 22747501
-
de Jong A, Pietersma H, Cordes M, Kuipers OP, Kok J. PePPER: a webserver for prediction of prokaryote promoter elements and regulons. BMC Genomics 2012, 13:299. 10.1186/1471-2164-13-299, 22747501.
-
(2012)
BMC Genomics
, vol.13
, pp. 299
-
-
de Jong, A.1
Pietersma, H.2
Cordes, M.3
Kuipers, O.P.4
Kok, J.5
|