-
2
-
-
51049100635
-
Overcoming scaling challenges in biomolecular simulations across multiple platforms
-
A. Bhatele, S. Kumar, C. Mei, J. C. Phillips, G. Zheng, and L. V. Kale. Overcoming scaling challenges in biomolecular simulations across multiple platforms. In Proceedings of IEEE International Parallel and Distributed Processing Symposium 2008, April 2008.
-
Proceedings of IEEE International Parallel and Distributed Processing Symposium 2008, April 2008
-
-
Bhatele, A.1
Kumar, S.2
Mei, C.3
Phillips, J.C.4
Zheng, G.5
Kale, L.V.6
-
4
-
-
31744441529
-
X10: An object-oriented approach to non-uniform cluster computing
-
New York, NY, USA, ACM
-
P. Charles, C. Grothoff, V. Saraswat, C. Donawa, A. Kielstra, K. Ebcioglu, C. von Praun, and V. Sarkar. X10: an object-oriented approach to non-uniform cluster computing. In OOPSLA '05: Proceedings of the 20th annual ACM SIGPLAN conference on Object-oriented programming, systems, languages, and applications, pages 519-538, New York, NY, USA, 2005. ACM.
-
(2005)
OOPSLA '05: Proceedings of the 20th Annual ACM SIGPLAN Conference on Object-oriented Programming, Systems, Languages, and Applications
, pp. 519-538
-
-
Charles, P.1
Grothoff, C.2
Saraswat, V.3
Donawa, C.4
Kielstra, A.5
Ebcioglu, K.6
Von Praun, C.7
Sarkar, V.8
-
5
-
-
80052980281
-
-
Cray Inc. Using the GNI and DMAPP APIs, 2010. http://docs.cray.com/books/ S-2446-3103/S-2446-3103.pdf.
-
(2010)
Using the GNI and DMAPP APIs
-
-
-
6
-
-
70449711368
-
Mpi-aware compiler optimizations for improving communication-computation overlap
-
New York, NY, USA, ACM
-
A. Danalis, L. Pollock, M. Swany, and J. Cavazos. Mpi-aware compiler optimizations for improving communication-computation overlap. In Proceedings of the 23rd international conference on Supercomputing, ICS '09, pages 316-325, New York, NY, USA, 2009. ACM.
-
(2009)
Proceedings of the 23rd International Conference on Supercomputing, ICS '09
, pp. 316-325
-
-
Danalis, A.1
Pollock, L.2
Swany, M.3
Cavazos, J.4
-
10
-
-
28044432083
-
Scaling applications to massively parallel machines using projections performance analysis tool
-
February
-
L. V. Kale, G. Zheng, C. W. Lee, and S. Kumar. Scaling applications to massively parallel machines using projections performance analysis tool. In Future Generation Computer Systems Special Issue on: Large-Scale System Performance Modeling and Analysis, volume 22, pages 347-358, February 2006.
-
(2006)
Future Generation Computer Systems Special Issue On: Large-Scale System Performance Modeling and Analysis
, vol.22
, pp. 347-358
-
-
Kale, L.V.1
Zheng, G.2
Lee, C.W.3
Kumar, S.4
-
11
-
-
83155173599
-
Enabling and scaling biomolecular simulations of 100 million atoms on petascale machines with a multicore-optimized message-driven runtime
-
C. Mei, Y. Sun, G. Zheng, E. J. Bohm, L. V. Kalé, J. C.Phillips, and C. Harrison. Enabling and scaling biomolecular simulations of 100 million atoms on petascale machines with a multicore-optimized message-driven runtime. In Proceedings of the 2011 ACM/IEEE conference on Supercomputing, Seattle, WA, November 2011.
-
Proceedings of the 2011 ACM/IEEE Conference on Supercomputing, Seattle, WA, November 2011
-
-
Mei, C.1
Sun, Y.2
Zheng, G.3
Bohm, E.J.4
Kalé, L.V.5
Phillips, J.C.6
Harrison, C.7
-
12
-
-
77954061503
-
Optimizing MPI Communication within large Multicore nodes with Kernel assistance
-
IEEE, editor, Atlanta, États-Unis, Apr.
-
S. Moreaud, B. Goglin, D. Goodell, and R. Namyst. Optimizing MPI Communication within large Multicore nodes with Kernel assistance. In IEEE, editor, Workshop on Communication Architecture for Clusters, held in conjunction with IPDPS 2010, page 7 p., Atlanta, États-Unis, Apr. 2010.
-
(2010)
Workshop on Communication Architecture for Clusters, Held in Conjunction with IPDPS 2010
, pp. 7
-
-
Moreaud, S.1
Goglin, B.2
Goodell, D.3
Namyst, R.4
-
13
-
-
0030157365
-
Global arrays: A nonuniform memory access programming model for high-performance computers
-
10.1007/BF00130708
-
J. Nieplocha, R. J. Harrison, and R. J. Littlefield. Global arrays: A nonuniform memory access programming model for high-performance computers. The Journal of Supercomputing, 10:169-189, 1996. 10.1007/BF00130708.
-
(1996)
The Journal of Supercomputing
, vol.10
, pp. 169-189
-
-
Nieplocha, J.1
Harrison, R.J.2
Littlefield, R.J.3
-
14
-
-
33745800319
-
Co-arrays in the next fortran standard
-
August
-
R. W. Numrich and J. Reid. Co-arrays in the next fortran standard. SIGPLAN Fortran Forum, 24:4-17, August 2005.
-
(2005)
SIGPLAN Fortran Forum
, vol.24
, pp. 4-17
-
-
Numrich, R.W.1
Reid, J.2
-
15
-
-
38049059011
-
Ompi: Optimizing mpi programs using partial evaluation
-
0
-
H. Ogawa and S. Matsuoka. Ompi: Optimizing mpi programs using partial evaluation. SC Conference, 0:37, 1996.
-
(1996)
SC Conference
, pp. 37
-
-
Ogawa, H.1
Matsuoka, S.2
-
16
-
-
85114705648
-
NAMD: Biomolecular simulation on thousands of processors
-
Baltimore, MD, September
-
J. C. Phillips, G. Zheng, S. Kumar, and L. V. Kalé. NAMD: Biomolecular simulation on thousands of processors. In Proceedings of the 2002 ACM/IEEE conference on Supercomputing, pages 1-18, Baltimore, MD, September 2002.
-
(2002)
Proceedings of the 2002 ACM/IEEE Conference on Supercomputing
, pp. 1-18
-
-
Phillips, J.C.1
Zheng, G.2
Kumar, S.3
Kalé, L.V.4
-
18
-
-
70449715705
-
Maximizing mpi point-to-point communication performance on rdma-enabled clusters with customized protocols
-
New York, NY, USA, ACM
-
M. Small and X. Yuan. Maximizing mpi point-to-point communication performance on rdma-enabled clusters with customized protocols. In Proceedings of the 23rd international conference on Supercomputing, ICS '09, pages 306-315, New York, NY, USA, 2009. ACM.
-
(2009)
Proceedings of the 23rd International Conference on Supercomputing, ICS '09
, pp. 306-315
-
-
Small, M.1
Yuan, X.2
-
19
-
-
80052901655
-
ParSSSE: An Adaptive Parallel State Space Search Engine
-
September
-
Y. Sun, G. Zheng, P. Jetley, and L. V. Kalé. ParSSSE: An Adaptive Parallel State Space Search Engine. Parallel Processing Letters, 21(3):319-338, September 2011.
-
(2011)
Parallel Processing Letters
, vol.21
, Issue.3
, pp. 319-338
-
-
Sun, Y.1
Zheng, G.2
Jetley, P.3
Kalé, L.V.4
-
20
-
-
84949552795
-
-
John Wiley & Sons, Inc., Hoboken, NJ, USA
-
T. S. Tarek El-Ghazawi, William Carlson and K. Yelick. UPC: Distributed Shared Memory Programming. John Wiley & Sons, Inc., Hoboken, NJ, USA, 2005.
-
(2005)
UPC: Distributed Shared Memory Programming
-
-
Tarek El-Ghazawi, T.S.1
Carlson, W.2
Yelick, K.3
|