-
1
-
-
0033014534
-
Managing resistance to anti-HIV drugs: an important consideration for effective disease management
-
10.2165/00003495-199957030-00006, 10193687
-
Vandamme AM, Van Laethem K, De Clercq E. Managing resistance to anti-HIV drugs: an important consideration for effective disease management. Drugs 1999, 57:337-361. 10.2165/00003495-199957030-00006, 10193687.
-
(1999)
Drugs
, vol.57
, pp. 337-361
-
-
Vandamme, A.M.1
Van Laethem, K.2
De Clercq, E.3
-
2
-
-
43049095987
-
HIV-1 reverse transcriptase inhibitor resistance mutations and fitness: a view from the clinic and ex vivo
-
10.1016/j.virusres.2007.12.021, 18289713
-
Martinez-Picado J, Martinez MA. HIV-1 reverse transcriptase inhibitor resistance mutations and fitness: a view from the clinic and ex vivo. Virus Res 2008, 134:104-123. 10.1016/j.virusres.2007.12.021, 18289713.
-
(2008)
Virus Res
, vol.134
, pp. 104-123
-
-
Martinez-Picado, J.1
Martinez, M.A.2
-
3
-
-
0033389039
-
Interruption of reverse transcriptase inhibitors or a switch from reverse transcriptase to protease inhibitors resulted in a fast reappearance of virus strains with a reverse transcriptase inhibitor-sensitive genotype
-
10.1097/00002030-199912240-00007, 10630523
-
Verhofstede C, Wanzeele FV, Van Der Gucht B, De Cabooter N, Plum J. Interruption of reverse transcriptase inhibitors or a switch from reverse transcriptase to protease inhibitors resulted in a fast reappearance of virus strains with a reverse transcriptase inhibitor-sensitive genotype. AIDS 1999, 13:2541-2546. 10.1097/00002030-199912240-00007, 10630523.
-
(1999)
AIDS
, vol.13
, pp. 2541-2546
-
-
Verhofstede, C.1
Wanzeele, F.V.2
Van Der Gucht, B.3
De Cabooter, N.4
Plum, J.5
-
4
-
-
24644472997
-
Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management
-
10.1086/432916, 16107947
-
Wensing AM, van de V, Angarano G, Asjö B, Balotta C, Boeri E, Camacho R, Chaix ML, Costagliola D, De Luca A, Derdelinckx I, Grossman Z, Hamouda O, Hatzakis A, Hemmer R, Hoepelman A, Horban A, Korn K, Kücherer C, Leitner T, Loveday C, MacRae E, Maljkovic I, de Mendoza C, Meyer L, Nielsen C, Op de C, Ormaasen V, Paraskevis D, Perrin L, et al. Prevalence of drug-resistant HIV-1 variants in untreated individuals in Europe: implications for clinical management. J Infect Dis 2005, 192:958-966. 10.1086/432916, 16107947.
-
(2005)
J Infect Dis
, vol.192
, pp. 958-966
-
-
Wensing, A.M.1
van de, V.2
Angarano, G.3
Asjö, B.4
Balotta, C.5
Boeri, E.6
Camacho, R.7
Chaix, M.L.8
Costagliola, D.9
De Luca, A.10
Derdelinckx, I.11
Grossman, Z.12
Hamouda, O.13
Hatzakis, A.14
Hemmer, R.15
Hoepelman, A.16
Horban, A.17
Korn, K.18
Kücherer, C.19
Leitner, T.20
Loveday, C.21
MacRae, E.22
Maljkovic, I.23
de Mendoza, C.24
Meyer, L.25
Nielsen, C.26
Op de, C.27
Ormaasen, V.28
Paraskevis, D.29
Perrin, L.30
more..
-
5
-
-
41449090659
-
Transmission of drug-resistant HIV-1 in Europe remains limited to single classes
-
Wensing A, Vercauteren J, van de V, Albert J, Åsjö B, Claudia B, Camacho R, Coughlan S, Grossman Z, Horban A, Kücherer C, Nielsen C, Paraskevis D, Loke W, Poggensee G, Riva C, Ruiz L, Schmit J, Schuurman R, Salminen M, Sonnerborg A, Stanojevic M, Struck D, Vandamme A, Boucher CA. Transmission of drug-resistant HIV-1 in Europe remains limited to single classes. AIDS 2008, 22:625-635.
-
(2008)
AIDS
, vol.22
, pp. 625-635
-
-
Wensing, A.1
Vercauteren, J.2
van de, V.3
Albert, J.4
Åsjö, B.5
Claudia, B.6
Camacho, R.7
Coughlan, S.8
Grossman, Z.9
Horban, A.10
Kücherer, C.11
Nielsen, C.12
Paraskevis, D.13
Loke, W.14
Poggensee, G.15
Riva, C.16
Ruiz, L.17
Schmit, J.18
Schuurman, R.19
Salminen, M.20
Sonnerborg, A.21
Stanojevic, M.22
Struck, D.23
Vandamme, A.24
Boucher, C.A.25
more..
-
6
-
-
70449723682
-
Transmission of drug-resistant HIV-1 is stabilizing in Europe
-
10.1086/644505, 19835478
-
Vercauteren J, Wensing AM, van de V, Albert J, Balotta C, Hamouda O, Kücherer C, Struck D, Schmit JC, Asjö B, Bruckova M, Camacho RJ, Clotet B, Coughlan S, Grossman Z, Horban A, Korn K, Kostrikis L.G., Nielsen C, Paraskevis D, Poljak M, Puchhammer-Stöckl E, Riva C, Ruiz L, Salminen M, Schuurman R, Sonnerborg A, Stanekova D, Stanojevic M, Vandamme AM, et al. Transmission of drug-resistant HIV-1 is stabilizing in Europe. J Infect Dis 2009, 200:1503-1508. 10.1086/644505, 19835478.
-
(2009)
J Infect Dis
, vol.200
, pp. 1503-1508
-
-
Vercauteren, J.1
Wensing, A.M.2
van de, V.3
Albert, J.4
Balotta, C.5
Hamouda, O.6
Kücherer, C.7
Struck, D.8
Schmit, J.C.9
Asjö, B.10
Bruckova, M.11
Camacho, R.J.12
Clotet, B.13
Coughlan, S.14
Grossman, Z.15
Horban, A.16
Korn, K.17
Kostrikis, L.G.18
Nielsen, C.19
Paraskevis, D.20
Poljak, M.21
Puchhammer-Stöckl, E.22
Riva, C.23
Ruiz, L.24
Salminen, M.25
Schuurman, R.26
Sonnerborg, A.27
Stanekova, D.28
Stanojevic, M.29
Vandamme, A.M.30
more..
-
7
-
-
0038082378
-
Infectivity and replication capacity of drug-resistant human immunodeficiency virus type 1 variants isolated during primary infection
-
10.1128/JVI.77.14.7736-7745.2003, 161921, 12829813
-
Simon V, Padte N, Murray D, Vanderhoeven J, Wrin T, Parkin N, Di Mascio M, Markowitz M. Infectivity and replication capacity of drug-resistant human immunodeficiency virus type 1 variants isolated during primary infection. J Virol 2003, 77:7736-7745. 10.1128/JVI.77.14.7736-7745.2003, 161921, 12829813.
-
(2003)
J Virol
, vol.77
, pp. 7736-7745
-
-
Simon, V.1
Padte, N.2
Murray, D.3
Vanderhoeven, J.4
Wrin, T.5
Parkin, N.6
Di Mascio, M.7
Markowitz, M.8
-
8
-
-
33645534025
-
Evolution of transmitted HIV-1 with drug-resistance mutations in the absence of therapy: effects on CD4+ T-cell count and HIV-1 RNA load
-
Bezemer D, de Ronde A, Prins M, Porter K, Gifford R, Pillay D, Masquelier B, Fleury H, Dabis F, Back N, Jurriaans S, van der Hoek L. Evolution of transmitted HIV-1 with drug-resistance mutations in the absence of therapy: effects on CD4+ T-cell count and HIV-1 RNA load. Antivir Ther (Lond) 2006, 11:173-178.
-
(2006)
Antivir Ther (Lond)
, vol.11
, pp. 173-178
-
-
Bezemer, D.1
de Ronde, A.2
Prins, M.3
Porter, K.4
Gifford, R.5
Pillay, D.6
Masquelier, B.7
Fleury, H.8
Dabis, F.9
Back, N.10
Jurriaans, S.11
van der Hoek, L.12
-
9
-
-
33745114356
-
An increase in viral replicative capacity drives the evolution of protease inhibitor-resistant human immunodeficiency virus type 1 in the absence of drugs
-
10.1097/01.qai.0000219787.65915.56, 16645546, Nijhuis M
-
van Maarseveen NM, de Jong D, Boucher CA, . Nijhuis M An increase in viral replicative capacity drives the evolution of protease inhibitor-resistant human immunodeficiency virus type 1 in the absence of drugs. J Acquir Immune Defic Syndr 2006, 42:162-168. 10.1097/01.qai.0000219787.65915.56, 16645546, Nijhuis M.
-
(2006)
J Acquir Immune Defic Syndr
, vol.42
, pp. 162-168
-
-
van Maarseveen, N.M.1
de Jong, D.2
Boucher, C.A.3
-
10
-
-
33947365160
-
The fitness cost of mutations associated with human immunodeficiency virus type 1 drug resistance is modulated by mutational interactions
-
10.1128/JVI.02712-06, 1865994, 17192300
-
Cong ME, Heneine W, García-Lerma JG. The fitness cost of mutations associated with human immunodeficiency virus type 1 drug resistance is modulated by mutational interactions. J Virol 2007, 81:3037-3041. 10.1128/JVI.02712-06, 1865994, 17192300.
-
(2007)
J Virol
, vol.81
, pp. 3037-3041
-
-
Cong, M.E.1
Heneine, W.2
García-Lerma, J.G.3
-
11
-
-
0037055016
-
Time trends in primary HIV-1 drug resistance among recently infected persons
-
10.1001/jama.288.2.181, 12095382
-
Grant RM, Hecht FM, Warmerdam M, Liu L, Liegler T, Petropoulos CJ, Hellmann NS, Chesney M, Busch MP, Kahn JO. Time trends in primary HIV-1 drug resistance among recently infected persons. JAMA 2002, 288:181-188. 10.1001/jama.288.2.181, 12095382.
-
(2002)
JAMA
, vol.288
, pp. 181-188
-
-
Grant, R.M.1
Hecht, F.M.2
Warmerdam, M.3
Liu, L.4
Liegler, T.5
Petropoulos, C.J.6
Hellmann, N.S.7
Chesney, M.8
Busch, M.P.9
Kahn, J.O.10
-
12
-
-
15844378825
-
Extensive polymorphisms observed in HIV-1 clade B protease gene using high-density oligonucleotide arrays
-
10.1038/nm0796-753, 8673920
-
Kozal MJ, Shah N, Shen N, Yang R, Fucini R, Merigan TC, Richman DD, Morris D, Hubbell E, Chee M, Gingeras TR. Extensive polymorphisms observed in HIV-1 clade B protease gene using high-density oligonucleotide arrays. Nat Med 1996, 2:753-759. 10.1038/nm0796-753, 8673920.
-
(1996)
Nat Med
, vol.2
, pp. 753-759
-
-
Kozal, M.J.1
Shah, N.2
Shen, N.3
Yang, R.4
Fucini, R.5
Merigan, T.C.6
Richman, D.D.7
Morris, D.8
Hubbell, E.9
Chee, M.10
Gingeras, T.R.11
-
13
-
-
33746025903
-
Natural polymorphisms in the protease gene modulate the replicative capacity of non-B HIV-1 variants in the absence of drug pressure
-
10.1016/j.jcv.2006.05.001, 16765636
-
Holguin A, Sune C, Hamy F, Soriano V, Klimkait T. Natural polymorphisms in the protease gene modulate the replicative capacity of non-B HIV-1 variants in the absence of drug pressure. J Clin Virol 2006, 36:264-271. 10.1016/j.jcv.2006.05.001, 16765636.
-
(2006)
J Clin Virol
, vol.36
, pp. 264-271
-
-
Holguin, A.1
Sune, C.2
Hamy, F.3
Soriano, V.4
Klimkait, T.5
-
14
-
-
0034734783
-
Fitness of human immunodeficiency virus type 1 protease inhibitor-selected single mutants
-
10.1006/viro.2000.0527, 10998332
-
Martinez-Picado J, Savara AV, Shi L, Sutton L, D'Aquila RT. Fitness of human immunodeficiency virus type 1 protease inhibitor-selected single mutants. Virology 2000, 275:318-322. 10.1006/viro.2000.0527, 10998332.
-
(2000)
Virology
, vol.275
, pp. 318-322
-
-
Martinez-Picado, J.1
Savara, A.V.2
Shi, L.3
Sutton, L.4
D'Aquila, R.T.5
-
15
-
-
78149306494
-
Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load
-
10.1371/journal.ppat.1001123, 2947993, 20941398
-
Alizon S, von Wyl V, Stadler T, Kouyos RD, Yerly S, Hirschel B, Boni J, Shah C, Klimkait T, Furrer H, Rauch A, Vernazza PL, Bernasconi E, Battegay M, Burgisser P, Telenti A, Gunthard HF, Bonhoeffer S. Phylogenetic approach reveals that virus genotype largely determines HIV set-point viral load. PLoS Pathog 2010, 6:e1001123. 10.1371/journal.ppat.1001123, 2947993, 20941398.
-
(2010)
PLoS Pathog
, vol.6
-
-
Alizon, S.1
von Wyl, V.2
Stadler, T.3
Kouyos, R.D.4
Yerly, S.5
Hirschel, B.6
Boni, J.7
Shah, C.8
Klimkait, T.9
Furrer, H.10
Rauch, A.11
Vernazza, P.L.12
Bernasconi, E.13
Battegay, M.14
Burgisser, P.15
Telenti, A.16
Gunthard, H.F.17
Bonhoeffer, S.18
-
16
-
-
0742325052
-
HLA allele sharing and HIV type 1 viremia in seroconverting Zambians with known transmitting partners
-
10.1089/088922204322749468, 15000695
-
Tang J, Tang S, Lobashevsky E, Zulu I, Aldrovandi G, Allen S, Kaslow RA. HLA allele sharing and HIV type 1 viremia in seroconverting Zambians with known transmitting partners. AIDS Res Hum Retroviruses 2004, 20:19-25. 10.1089/088922204322749468, 15000695.
-
(2004)
AIDS Res Hum Retroviruses
, vol.20
, pp. 19-25
-
-
Tang, J.1
Tang, S.2
Lobashevsky, E.3
Zulu, I.4
Aldrovandi, G.5
Allen, S.6
Kaslow, R.A.7
-
17
-
-
3142678466
-
Higher CD4+ T cell counts associated with low viral pol replication capacity among treatment-naive adults in early HIV-1 infection
-
10.1086/422036, 15216458
-
Barbour JD, Hecht FM, Wrin T, Segal MR, Ramstead CA, Liegler TJ, Busch MP, Petropoulos CJ, Hellmann NS, Kahn JO, Grant RM. Higher CD4+ T cell counts associated with low viral pol replication capacity among treatment-naive adults in early HIV-1 infection. J Infect Dis 2004, 190:251-256. 10.1086/422036, 15216458.
-
(2004)
J Infect Dis
, vol.190
, pp. 251-256
-
-
Barbour, J.D.1
Hecht, F.M.2
Wrin, T.3
Segal, M.R.4
Ramstead, C.A.5
Liegler, T.J.6
Busch, M.P.7
Petropoulos, C.J.8
Hellmann, N.S.9
Kahn, J.O.10
Grant, R.M.11
-
18
-
-
34047207715
-
HIV-1 subtype D infection is associated with faster disease progression than subtype A in spite of similar plasma HIV-1 loads
-
10.1086/512682, 17357054
-
Baeten JM, Chohan B, Lavreys L, Chohan V, McClelland RS, Certain L, Mandaliya K, Jaoko W, Overbaugh J. HIV-1 subtype D infection is associated with faster disease progression than subtype A in spite of similar plasma HIV-1 loads. J Infect Dis 2007, 195:1177-1180. 10.1086/512682, 17357054.
-
(2007)
J Infect Dis
, vol.195
, pp. 1177-1180
-
-
Baeten, J.M.1
Chohan, B.2
Lavreys, L.3
Chohan, V.4
McClelland, R.S.5
Certain, L.6
Mandaliya, K.7
Jaoko, W.8
Overbaugh, J.9
-
19
-
-
37549044257
-
Estimation of an in vivo fitness landscape experienced by HIV-1 under drug selective pressure useful for prediction of drug resistance evolution during treatment
-
10.1093/bioinformatics/btm540, 18024973
-
Deforche K, Camacho R, Van Laethem K, Lemey P, Rambaut A, Moreau Y, Vandamme AM. Estimation of an in vivo fitness landscape experienced by HIV-1 under drug selective pressure useful for prediction of drug resistance evolution during treatment. Bioinformatics 2008, 24:34-41. 10.1093/bioinformatics/btm540, 18024973.
-
(2008)
Bioinformatics
, vol.24
, pp. 34-41
-
-
Deforche, K.1
Camacho, R.2
Van Laethem, K.3
Lemey, P.4
Rambaut, A.5
Moreau, Y.6
Vandamme, A.M.7
-
20
-
-
62749200513
-
Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance 2009, update
-
10.1371/journal.pone.0004724, 2648874, 19266092
-
Bennett DE, Camacho RJ, Otelea D, Kuritzkes DR, Fleury H, Kiuchi M, Heneine W, Kantor R, Jordan MR, Schapiro JM, Vandamme AM, Sandstrom P, Boucher CA, van de V, Rhee SY, Liu TF, Pillay D, Shafer RW. Drug resistance mutations for surveillance of transmitted HIV-1 drug-resistance 2009, update. PLoS ONE 2009, 4:e4724. 10.1371/journal.pone.0004724, 2648874, 19266092.
-
(2009)
PLoS ONE
, vol.4
-
-
Bennett, D.E.1
Camacho, R.J.2
Otelea, D.3
Kuritzkes, D.R.4
Fleury, H.5
Kiuchi, M.6
Heneine, W.7
Kantor, R.8
Jordan, M.R.9
Schapiro, J.M.10
Vandamme, A.M.11
Sandstrom, P.12
Boucher, C.A.13
van de, V.14
Rhee, S.Y.15
Liu, T.F.16
Pillay, D.17
Shafer, R.W.18
-
21
-
-
48449083017
-
HIV-1 drug resistance mutations: an updated framework for the second decade of HAART
-
2547476, 18615118
-
Shafer RW, Schapiro JM. HIV-1 drug resistance mutations: an updated framework for the second decade of HAART. AIDS Rev 2008, 10:67-84. 2547476, 18615118.
-
(2008)
AIDS Rev
, vol.10
, pp. 67-84
-
-
Shafer, R.W.1
Schapiro, J.M.2
-
22
-
-
49849095346
-
Transmission of HIV-1 minority-resistant variants and response to first-line antiretroviral therapy
-
10.1097/QAD.0b013e3283034953, 18614864
-
Peuchant O, Thiebaut R, Capdepont S, Lavignolle-Aurillac V, Neau D, Morlat P, Dabis F, Fleury H, Masquelier B, Dabis F, Chene G, Dabis F, Lawson-Ayayi S, Thiebaut R, Winnock M, Bonarek M, Bonnal F, Bonnet F, Bernard N, Caubet O, Caunegre L, Cazanave C, Ceccaldi J, Couzigou P, Dauchy FA, De La Taille C, De Witte MC, Dupon M, Duffau P, Dutronc H, et al. Transmission of HIV-1 minority-resistant variants and response to first-line antiretroviral therapy. AIDS 2008, 22:1417-1423. 10.1097/QAD.0b013e3283034953, 18614864.
-
(2008)
AIDS
, vol.22
, pp. 1417-1423
-
-
Peuchant, O.1
Thiebaut, R.2
Capdepont, S.3
Lavignolle-Aurillac, V.4
Neau, D.5
Morlat, P.6
Dabis, F.7
Fleury, H.8
Masquelier, B.9
Dabis, F.10
Chene, G.11
Dabis, F.12
Lawson-Ayayi, S.13
Thiebaut, R.14
Winnock, M.15
Bonarek, M.16
Bonnal, F.17
Bonnet, F.18
Bernard, N.19
Caubet, O.20
Caunegre, L.21
Cazanave, C.22
Ceccaldi, J.23
Couzigou, P.24
Dauchy, F.A.25
De La Taille, C.26
De Witte, M.C.27
Dupon, M.28
Duffau, P.29
Dutronc, H.30
more..
-
23
-
-
3142783364
-
Do patients who are infected with drug-resistant HIV have a different CD4 cell decline after seroconversion? An exploratory analysis in the UK Register of HIV Seroconverters
-
10.1097/01.aids.0000131341.45795.33, 15199326
-
Bhaskaran K, Pillay D, Walker AS, Fisher M, Hawkins D, Gilson R, McLean K, Porter K. Do patients who are infected with drug-resistant HIV have a different CD4 cell decline after seroconversion? An exploratory analysis in the UK Register of HIV Seroconverters. AIDS 2004, 18:1471-1473. 10.1097/01.aids.0000131341.45795.33, 15199326.
-
(2004)
AIDS
, vol.18
, pp. 1471-1473
-
-
Bhaskaran, K.1
Pillay, D.2
Walker, A.S.3
Fisher, M.4
Hawkins, D.5
Gilson, R.6
McLean, K.7
Porter, K.8
-
24
-
-
75749155415
-
Transmission of HIV-1 drug-resistant variants: prevalence and effect on treatment outcome
-
10.1086/650001, 20085464
-
Jakobsen MR, Tolstrup M, Søgaard OS, Jørgensen LB, Gorry PR, Laursen A, Ostergaard L. Transmission of HIV-1 drug-resistant variants: prevalence and effect on treatment outcome. Clin Infect Dis 2010, 50:566-573. 10.1086/650001, 20085464.
-
(2010)
Clin Infect Dis
, vol.50
, pp. 566-573
-
-
Jakobsen, M.R.1
Tolstrup, M.2
Søgaard, O.S.3
Jørgensen, L.B.4
Gorry, P.R.5
Laursen, A.6
Ostergaard, L.7
-
25
-
-
0034460604
-
Genetic diversity of protease and reverse transcriptase sequences in non-subtype-B human immunodeficiency virus type 1 strains: evidence of many minor drug resistance mutations in treatment-naive patients
-
87518, 11060045, Delaporte E
-
Vergne L, Peeters M, Mpoudi-Ngole E, Bourgeois A, Liegeois F, Toure-Kane C, Mboup S, Mulanga-Kabeya C, Saman E, Jourdan J, Reynes J, . Delaporte E Genetic diversity of protease and reverse transcriptase sequences in non-subtype-B human immunodeficiency virus type 1 strains: evidence of many minor drug resistance mutations in treatment-naive patients. J Clin Microbiol 2000, 38:3919-3925. 87518, 11060045, Delaporte E.
-
(2000)
J Clin Microbiol
, vol.38
, pp. 3919-3925
-
-
Vergne, L.1
Peeters, M.2
Mpoudi-Ngole, E.3
Bourgeois, A.4
Liegeois, F.5
Toure-Kane, C.6
Mboup, S.7
Mulanga-Kabeya, C.8
Saman, E.9
Jourdan, J.10
Reynes, J.11
-
26
-
-
7544232753
-
Variability in the PR and RT genes of HIV-1 isolated from recently infected subjects
-
Wainberg MA
-
Turner D, Roldan A, Brenner B, Moisi D, Routy JP, . Wainberg MA Variability in the PR and RT genes of HIV-1 isolated from recently infected subjects. Antivir Chem Chemother 2004, 15:255-259. Wainberg MA.
-
(2004)
Antivir Chem Chemother
, vol.15
, pp. 255-259
-
-
Turner, D.1
Roldan, A.2
Brenner, B.3
Moisi, D.4
Routy, J.P.5
-
27
-
-
0242363243
-
Relationship between in vitro human immunodeficiency virus type 1 replication rate and virus load in plasma
-
10.1128/JVI.77.22.12105-12112.2003, 253754, 14581547
-
Campbell TB, Schneider K, Wrin T, Petropoulos CJ, Connick E. Relationship between in vitro human immunodeficiency virus type 1 replication rate and virus load in plasma. J Virol 2003, 77:12105-12112. 10.1128/JVI.77.22.12105-12112.2003, 253754, 14581547.
-
(2003)
J Virol
, vol.77
, pp. 12105-12112
-
-
Campbell, T.B.1
Schneider, K.2
Wrin, T.3
Petropoulos, C.J.4
Connick, E.5
-
28
-
-
20644445015
-
HIV-1 pol replication capacity predicts disease progression
-
10.1097/01.aids.0000171400.15619.e1, 15905667
-
Daar ES, Kesler KL, Wrin T, Petropoulo CJ, Bates M, Lail A, Hellmann NS, Gomperts E, Donfield S. HIV-1 pol replication capacity predicts disease progression. AIDS 2005, 19:871-877. 10.1097/01.aids.0000171400.15619.e1, 15905667.
-
(2005)
AIDS
, vol.19
, pp. 871-877
-
-
Daar, E.S.1
Kesler, K.L.2
Wrin, T.3
Petropoulo, C.J.4
Bates, M.5
Lail, A.6
Hellmann, N.S.7
Gomperts, E.8
Donfield, S.9
-
29
-
-
34447337271
-
Association of HIV-1 replication capacity with treatment outcomes in patients with virologic treatment failure
-
10.1097/QAI.0b013e318074f008, 17554216
-
De Luca A, Weidler J, Di Giambenedetto S, Coakley E, Cingolani A, Bates M, Lie Y, Pesano R, Cauda R, Schapiro J. Association of HIV-1 replication capacity with treatment outcomes in patients with virologic treatment failure. J Acquir Immune Defic Syndr 2007, 45:411-417. 10.1097/QAI.0b013e318074f008, 17554216.
-
(2007)
J Acquir Immune Defic Syndr
, vol.45
, pp. 411-417
-
-
De Luca, A.1
Weidler, J.2
Di Giambenedetto, S.3
Coakley, E.4
Cingolani, A.5
Bates, M.6
Lie, Y.7
Pesano, R.8
Cauda, R.9
Schapiro, J.10
-
30
-
-
77949402350
-
HIV replication capacity is an independent predictor of disease progression in persons with untreated chronic HIV infection
-
10.1097/QAI.0b013e3181cae480, 2837106, 20032783
-
Goetz MB, Leduc R, Wyman N, Kostman JR, Labriola AM, Lie Y, Weidler J, Coakley E, Bates M, Luskin-Hawk R. HIV replication capacity is an independent predictor of disease progression in persons with untreated chronic HIV infection. J Acquir Immune Defic Syndr 2010, 53:472-479. 10.1097/QAI.0b013e3181cae480, 2837106, 20032783.
-
(2010)
J Acquir Immune Defic Syndr
, vol.53
, pp. 472-479
-
-
Goetz, M.B.1
Leduc, R.2
Wyman, N.3
Kostman, J.R.4
Labriola, A.M.5
Lie, Y.6
Weidler, J.7
Coakley, E.8
Bates, M.9
Luskin-Hawk, R.10
-
31
-
-
60649120957
-
Discordant genotypic interpretation and phenotypic role of protease mutations in HIV-1 subtypes B and G
-
10.1093/jac/dkn526, 19136678
-
Santos AF, Abecasis AB, Vandamme AM, Camacho RJ, Soares MA. Discordant genotypic interpretation and phenotypic role of protease mutations in HIV-1 subtypes B and G. J Antimicrob Chemother 2009, 63(3):593-599. 10.1093/jac/dkn526, 19136678.
-
(2009)
J Antimicrob Chemother
, vol.63
, Issue.3
, pp. 593-599
-
-
Santos, A.F.1
Abecasis, A.B.2
Vandamme, A.M.3
Camacho, R.J.4
Soares, M.A.5
-
32
-
-
84860120078
-
Effect of natural polymorphisms in the HIV-1 CRF02_AG protease on protease inhibitor hypersusceptibility
-
10.1128/AAC.06079-11, 3346603, 22330918
-
Santos AF, Tebit DM, Lalonde MS, Abecasis AB, Ratcliff A, Camacho RJ, Diaz RS, Herchenroder O, Soares MA, Arts EJ. Effect of natural polymorphisms in the HIV-1 CRF02_AG protease on protease inhibitor hypersusceptibility. Antimicrob Agents Chemother 2012, 56(5):2719-2725. 10.1128/AAC.06079-11, 3346603, 22330918.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, Issue.5
, pp. 2719-2725
-
-
Santos, A.F.1
Tebit, D.M.2
Lalonde, M.S.3
Abecasis, A.B.4
Ratcliff, A.5
Camacho, R.J.6
Diaz, R.S.7
Herchenroder, O.8
Soares, M.A.9
Arts, E.J.10
-
33
-
-
84862915396
-
Interplay between single resistance-associated mutations in the HIV-1 protease and viral infectivity, protease activity, and inhibitor sensitivity
-
10.1128/AAC.05549-11, 3264268, 22083488
-
Henderson GJ, Lee SK, Irlbeck DM, Harris J, Kline M, Pollom E, Parkin N, Swanstrom R. Interplay between single resistance-associated mutations in the HIV-1 protease and viral infectivity, protease activity, and inhibitor sensitivity. Antimicrob Agents Chemother 2012, 56(2):623-633. 10.1128/AAC.05549-11, 3264268, 22083488.
-
(2012)
Antimicrob Agents Chemother
, vol.56
, Issue.2
, pp. 623-633
-
-
Henderson, G.J.1
Lee, S.K.2
Irlbeck, D.M.3
Harris, J.4
Kline, M.5
Pollom, E.6
Parkin, N.7
Swanstrom, R.8
-
34
-
-
63449110982
-
Gag mutations strongly contribute to HIV-1 resistance to protease inhibitors in highly drug-experienced patients besides compensating for fitness loss
-
10.1371/journal.ppat.1000345, 2652074, 19300491
-
Dam E, Quercia R, Glass B, Descamps D, Launay O, Duval X, Krausslich HG, Hance AJ, Clavel F. Gag mutations strongly contribute to HIV-1 resistance to protease inhibitors in highly drug-experienced patients besides compensating for fitness loss. PLoS Pathog 2009, 5(3):e1000345. 10.1371/journal.ppat.1000345, 2652074, 19300491.
-
(2009)
PLoS Pathog
, vol.5
, Issue.3
-
-
Dam, E.1
Quercia, R.2
Glass, B.3
Descamps, D.4
Launay, O.5
Duval, X.6
Krausslich, H.G.7
Hance, A.J.8
Clavel, F.9
-
35
-
-
78049495989
-
Early selection in Gag by protective HLA alleles contributes to reduced HIV-1 replication capacity that may be largely compensated for in chronic infection
-
10.1128/JVI.01086-10, 2977869, 20810731
-
Brockman MA, Brumme ZL, Brumme CJ, Miura T, Sela J, Rosato PC, Kadie CM, Carlson JM, Markle TJ, Streeck H, Kelleher AD, Markowitz M, Jessen H, Rosenberg E, Altfeld M, Harrigan PR, Heckerman D, Walker BD, Allen TM. Early selection in Gag by protective HLA alleles contributes to reduced HIV-1 replication capacity that may be largely compensated for in chronic infection. J Virol 2010, 84(22):11937-11949. 10.1128/JVI.01086-10, 2977869, 20810731.
-
(2010)
J Virol
, vol.84
, Issue.22
, pp. 11937-11949
-
-
Brockman, M.A.1
Brumme, Z.L.2
Brumme, C.J.3
Miura, T.4
Sela, J.5
Rosato, P.C.6
Kadie, C.M.7
Carlson, J.M.8
Markle, T.J.9
Streeck, H.10
Kelleher, A.D.11
Markowitz, M.12
Jessen, H.13
Rosenberg, E.14
Altfeld, M.15
Harrigan, P.R.16
Heckerman, D.17
Walker, B.D.18
Allen, T.M.19
-
36
-
-
33750297873
-
HIV evolutionary dynamics within and among hosts
-
Lemey P, Rambaut A, Pybus OG. HIV evolutionary dynamics within and among hosts. AIDS Rev 2006, 8:125-140.
-
(2006)
AIDS Rev
, vol.8
, pp. 125-140
-
-
Lemey, P.1
Rambaut, A.2
Pybus, O.G.3
-
37
-
-
40649106525
-
The incidence of multidrug and full class resistance in HIV-1 infected patients is decreasing over time (2001-2006) in Portugal
-
10.1186/1742-4690-5-12, 2265747, 18241328
-
Vercauteren J, Deforche K, Theys K, Debruyne M, Duque LM, Peres S, Carvalho AP, Mansinho K, Vandamme AM, Camacho R. The incidence of multidrug and full class resistance in HIV-1 infected patients is decreasing over time (2001-2006) in Portugal. Retrovirology 2008, 5:12. 10.1186/1742-4690-5-12, 2265747, 18241328.
-
(2008)
Retrovirology
, vol.5
, pp. 12
-
-
Vercauteren, J.1
Deforche, K.2
Theys, K.3
Debruyne, M.4
Duque, L.M.5
Peres, S.6
Carvalho, A.P.7
Mansinho, K.8
Vandamme, A.M.9
Camacho, R.10
-
38
-
-
73549084507
-
Clinical management of HIV-1 resistance
-
10.1016/j.antiviral.2009.09.015, 19808056
-
Paredes R, Clotet B. Clinical management of HIV-1 resistance. Antiviral Res 2010, 85:245-265. 10.1016/j.antiviral.2009.09.015, 19808056.
-
(2010)
Antiviral Res
, vol.85
, pp. 245-265
-
-
Paredes, R.1
Clotet, B.2
-
39
-
-
77955108978
-
Estimating the individualized HIV-1 genetic barrier to resistance using a nelfinavir fitness landscape
-
10.1186/1471-2105-11-409, 2921410, 20682040
-
Theys K, Deforche K, Beheydt G, Moreau Y, van Laethem K, Lemey P, Camacho RJ, Rhee SY, Shafer RW, Van Wijngaerden E, Vandamme AM. Estimating the individualized HIV-1 genetic barrier to resistance using a nelfinavir fitness landscape. BMC Bioinformatics 2010, 11:409. 10.1186/1471-2105-11-409, 2921410, 20682040.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 409
-
-
Theys, K.1
Deforche, K.2
Beheydt, G.3
Moreau, Y.4
van Laethem, K.5
Lemey, P.6
Camacho, R.J.7
Rhee, S.Y.8
Shafer, R.W.9
Van Wijngaerden, E.10
Vandamme, A.M.11
-
40
-
-
0035887629
-
Secondary mutations in the protease region of human immunodeficiency virus and virologic failure in drug-naive patients treated with protease inhibitor-based therapy
-
10.1086/323604, 11574912
-
Perno CF, Cozzi-Lepri A, Balotta C, Forbici F, Violin M, Bertoli A, Facchi G, Pezzotti P, Cadeo G, Tositti G, Pasquinucci S, Pauluzzi S, Scalzini A, Salassa B, Vincenti A, Phillips AN, Dianzani F, Appice A, Angarano G, Monno L, Ippolito G, Moroni M, d' Arminio Monforte A. Secondary mutations in the protease region of human immunodeficiency virus and virologic failure in drug-naive patients treated with protease inhibitor-based therapy. J Infect Dis 2001, 184:983-991. 10.1086/323604, 11574912.
-
(2001)
J Infect Dis
, vol.184
, pp. 983-991
-
-
Perno, C.F.1
Cozzi-Lepri, A.2
Balotta, C.3
Forbici, F.4
Violin, M.5
Bertoli, A.6
Facchi, G.7
Pezzotti, P.8
Cadeo, G.9
Tositti, G.10
Pasquinucci, S.11
Pauluzzi, S.12
Scalzini, A.13
Salassa, B.14
Vincenti, A.15
Phillips, A.N.16
Dianzani, F.17
Appice, A.18
Angarano, G.19
Monno, L.20
Ippolito, G.21
Moroni, M.22
d' Arminio Monforte, A.23
more..
-
41
-
-
84155168018
-
Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission
-
10.1097/QAD.0b013e32834db418, 22089381
-
Herbeck JT, Muller V, Maust BS, Ledergerber B, Torti C, Di Giambenedetto S, Gras L, Gunthard HF, Jacobson LP, Mullins JI, Gottlieb GS. Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission. AIDS 2012, 26:193-205. 10.1097/QAD.0b013e32834db418, 22089381.
-
(2012)
AIDS
, vol.26
, pp. 193-205
-
-
Herbeck, J.T.1
Muller, V.2
Maust, B.S.3
Ledergerber, B.4
Torti, C.5
Di Giambenedetto, S.6
Gras, L.7
Gunthard, H.F.8
Jacobson, L.P.9
Mullins, J.I.10
Gottlieb, G.S.11
-
42
-
-
33845353741
-
Analysis of HIV-1 pol sequences using Bayesian networks: implications for drug resistance
-
10.1093/bioinformatics/btl508, 17021157
-
Deforche K, Silander T, Camacho R, Grossman Z, Soares MA, Van Laethem K, Kantor R, Moreau Y, Vandamme AM. Analysis of HIV-1 pol sequences using Bayesian networks: implications for drug resistance. Bioinformatics 2006, 22:2975-2979. 10.1093/bioinformatics/btl508, 17021157.
-
(2006)
Bioinformatics
, vol.22
, pp. 2975-2979
-
-
Deforche, K.1
Silander, T.2
Camacho, R.3
Grossman, Z.4
Soares, M.A.5
Van Laethem, K.6
Kantor, R.7
Moreau, Y.8
Vandamme, A.M.9
-
43
-
-
77955298676
-
Resistance pathways of human immunodeficiency virus type 1 against the combination of zidovudine and lamivudine
-
10.1099/vir.0.022657-0, 20410311
-
Theys K, Deforche K, Libin P, Camacho RJ, Van Laethem K, Vandamme AM. Resistance pathways of human immunodeficiency virus type 1 against the combination of zidovudine and lamivudine. J Gen Virol 2010, 91:1898-1908. 10.1099/vir.0.022657-0, 20410311.
-
(2010)
J Gen Virol
, vol.91
, pp. 1898-1908
-
-
Theys, K.1
Deforche, K.2
Libin, P.3
Camacho, R.J.4
Van Laethem, K.5
Vandamme, A.M.6
-
44
-
-
47249117584
-
Modelled in vivo HIV fitness under drug selective pressure and estimated genetic barrier towards resistance are predictive for virological response
-
Deforche K, Cozzi-Lepri A, Theys K, Clotet B, Camacho RJ, Kjaer J, Van Laethem K, Phillips A, Moreau Y, Lundgren JD, Vandamme AM. Modelled in vivo HIV fitness under drug selective pressure and estimated genetic barrier towards resistance are predictive for virological response. Antivir Ther (Lond) 2008, 13:399-407.
-
(2008)
Antivir Ther (Lond)
, vol.13
, pp. 399-407
-
-
Deforche, K.1
Cozzi-Lepri, A.2
Theys, K.3
Clotet, B.4
Camacho, R.J.5
Kjaer, J.6
Van Laethem, K.7
Phillips, A.8
Moreau, Y.9
Lundgren, J.D.10
Vandamme, A.M.11
-
45
-
-
27544496497
-
An automated genotyping system for analysis of HIV-1 and other microbial sequences
-
10.1093/bioinformatics/bti607, 16076886
-
de Oliveira T, Deforche K, Cassol S, Salminen M, Paraskevis D, Seebregts C, Snoeck J, van Rensburg EJ, Wensing AM, van de V, Boucher CA, Camacho R, Vandamme AM. An automated genotyping system for analysis of HIV-1 and other microbial sequences. Bioinformatics 2005, 21:3797-3800. 10.1093/bioinformatics/bti607, 16076886.
-
(2005)
Bioinformatics
, vol.21
, pp. 3797-3800
-
-
de Oliveira, T.1
Deforche, K.2
Cassol, S.3
Salminen, M.4
Paraskevis, D.5
Seebregts, C.6
Snoeck, J.7
van Rensburg, E.J.8
Wensing, A.M.9
van de, V.10
Boucher, C.A.11
Camacho, R.12
Vandamme, A.M.13
-
46
-
-
77957560654
-
Viral evolution and escape during acute HIV-1 infection
-
2945609, 20846038
-
Boutwell CL, Rolland MM, Herbeck JT, Mullins JI, Allen TM. Viral evolution and escape during acute HIV-1 infection. J Infect Dis 2010, 202(Suppl 2):S309-S314. 2945609, 20846038.
-
(2010)
J Infect Dis
, vol.202
, Issue.SUPPL. 2
-
-
Boutwell, C.L.1
Rolland, M.M.2
Herbeck, J.T.3
Mullins, J.I.4
Allen, T.M.5
-
47
-
-
34547403540
-
Predictors of disease progression in HIV infection: a review
-
10.1186/1742-6405-4-11, 1887539, 17502001
-
Langford S, Ananworanich J, Cooper D. Predictors of disease progression in HIV infection: a review. AIDS Res Ther 2007, 4:11. 10.1186/1742-6405-4-11, 1887539, 17502001.
-
(2007)
AIDS Res Ther
, vol.4
, pp. 11
-
-
Langford, S.1
Ananworanich, J.2
Cooper, D.3
|