-
2
-
-
2342460436
-
Bacteriorhodopsin
-
Lanyi, J. K. (2004) Bacteriorhodopsin. Annu. Rev. Physiol. 66, 665-688
-
(2004)
Annu. Rev. Physiol.
, vol.66
, pp. 665-688
-
-
Lanyi, J.K.1
-
3
-
-
3242797479
-
Fungal rhodopsins and opsin-related proteins: Eukaryotic homologues of bacteriorhodopsin with unknown functions
-
Brown, L. S. (2004) Fungal rhodopsins and opsin-related proteins: eukaryotic homologues of bacteriorhodopsin with unknown functions. Photochem. Photobiol. Sci. 3, 555-565
-
(2004)
Photochem. Photobiol. Sci.
, vol.3
, pp. 555-565
-
-
Brown, L.S.1
-
4
-
-
33749580770
-
The multitalented microbial sensory rhodopsins
-
Spudich, J. L. (2006) The multitalented microbial sensory rhodopsins. Trends Microbiol. 14, 480-487
-
(2006)
Trends Microbiol.
, vol.14
, pp. 480-487
-
-
Spudich, J.L.1
-
5
-
-
0015244581
-
Rhodopsin-like protein from the purple membrane of Halobacterium halobium
-
Oesterhelt, D., and Stoeckenius, W. (1971) Rhodopsin-like protein from the purple membrane of Halobacterium halobium. Nat. New Biol. 233, 149-152
-
(1971)
Nat. New Biol.
, vol.233
, pp. 149-152
-
-
Oesterhelt, D.1
Stoeckenius, W.2
-
6
-
-
33749557420
-
Microbial rhodopsins: functional versatility and genetic mobility
-
DOI 10.1016/j.tim.2006.09.006, PII S0966842X06002307
-
Sharma, A. K., Spudich, J. L., and Doolittle, W. F. (2006) Microbial rhodopsins: functional versatility and genetic mobility. Trends Microbiol. 14, 463-469 (Pubitemid 44537809)
-
(2006)
Trends in Microbiology
, vol.14
, Issue.11
, pp. 463-469
-
-
Sharma, A.K.1
Spudich, J.L.2
Doolittle, W.F.3
-
7
-
-
67549134809
-
Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater actinobacteria
-
Sharma, A. K., Sommerfeld, K., Bullerjahn, G. S., Matteson, A. R., Wilhelm, S. W., Jezbera, J., Brandt, U., Doolittle, W. F., and Hahn, M. W. (2009) Actinorhodopsin genes discovered in diverse freshwater habitats and among cultivated freshwater actinobacteria. Isme. J. 3, 726-737
-
(2009)
Isme. J.
, vol.3
, pp. 726-737
-
-
Sharma, A.K.1
Sommerfeld, K.2
Bullerjahn, G.S.3
Matteson, A.R.4
Wilhelm, S.W.5
Jezbera, J.6
Brandt, U.7
Doolittle, W.F.8
Hahn, M.W.9
-
8
-
-
0034519206
-
Retinylidene proteins: Structures and functions from archaea to humans
-
DOI 10.1146/annurev.cellbio.16.1.365
-
Spudich, J. L., Yang, C. S., Jung, K. H., and Spudich, E. N. (2000) Retinylidene proteins: structures and functions from archaea to humans. Annu. Rev. Cell Dev. Biol. 16, 365-392 (Pubitemid 32037511)
-
(2000)
Annual Review of Cell and Developmental Biology
, vol.16
, pp. 365-392
-
-
Spudich, J.L.1
Yang, C.-S.2
Jung, K.-H.3
Spudich, E.N.4
-
9
-
-
0037346546
-
Demonstration of a sensory rhodopsin in eubacteria
-
DOI 10.1046/j.1365-2958.2003.03395.x
-
Jung, K. H., Trivedi, V. D., and Spudich, J. L. (2003) Demonstration of a sensory rhodopsin in eubacteria. Mol. Microbiol. 47, 1513-1522 (Pubitemid 36363336)
-
(2003)
Molecular Microbiology
, vol.47
, Issue.6
, pp. 1513-1522
-
-
Jung, K.-H.1
Trivedi, V.D.2
Spudich, J.L.3
-
10
-
-
33847300912
-
Crystal Structure of the Anabaena Sensory Rhodopsin Transducer
-
DOI 10.1016/j.jmb.2006.11.074, PII S0022283606016330
-
Vogeley, L., Trivedi, V. D., Sineshchekov, O. A., Spudich, E. N., Spudich, J. L., and Luecke, H. (2007) Crystal structure of the Anabaena sensory rhodopsin transducer. J. Mol. Biol. 367, 741-751 (Pubitemid 46330368)
-
(2007)
Journal of Molecular Biology
, vol.367
, Issue.3
, pp. 741-751
-
-
Vogeley, L.1
Trivedi, V.D.2
Sineshchekov, O.A.3
Spudich, E.N.4
Spudich, J.L.5
Luecke, H.6
-
11
-
-
0030906654
-
Molecular mechanism of photosignaling by archaeal sensory rhodopsins
-
DOI 10.1146/annurev.biophys.26.1.223
-
Hoff, W. D., Jung, K. H., and Spudich, J. L. (1997) Molecular mechanism of photosignaling by archaeal sensory rhodopsins. Annu. Rev. Biophys. Biomol. Struct. 26, 223-258 (Pubitemid 27255373)
-
(1997)
Annual Review of Biophysics and Biomolecular Structure
, vol.26
, pp. 223-258
-
-
Hoff, W.D.1
Jung, K.-H.2
Spudich, J.L.3
-
13
-
-
17644387239
-
Photochromicity of Anabaena sensory rhodopsin, an atypical microbial receptor with a cis-retinal light-adapted form
-
DOI 10.1074/jbc.M501416200
-
Sineshchekov, O. A., Trivedi, V. D., Sasaki, J., and Spudich, J. L. (2005) Photochromicity of Anabaena sensory rhodopsin, an atypical microbial receptor with a cis-retinal light-adapted form. J. Biol. Chem. 280, 14663-14668 (Pubitemid 40562812)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.15
, pp. 14663-14668
-
-
Sineshchekov, O.A.1
Trivedi, V.D.2
Sasaki, J.3
Spudich, J.L.4
-
14
-
-
24944551978
-
FTIR spectroscopy of the all-trans form of Anabaena sensory rhodopsin at 77 K: Hydrogen bond of a water between the Schiff base and Asp75
-
DOI 10.1021/bi050841o
-
Furutani, Y., Kawanabe, A., Jung, K. H., and Kandori, H. (2005) FTIR spectroscopy of the all-trans form of Anabaena sensory rhodopsin at 77 K: hydrogen bond of a water between the Schiff base and Asp75. Biochemistry 44, 12287-12296 (Pubitemid 41324322)
-
(2005)
Biochemistry
, vol.44
, Issue.37
, pp. 12287-12296
-
-
Furutani, Y.1
Kawanabe, A.2
Jung, K.-H.3
Kandori, H.4
-
15
-
-
33744959429
-
Conformational changes in the photocycle of Anabaena sensory rhodopsin: Absence of the Schiff base counterion protonation signal
-
DOI 10.1074/jbc.M600033200
-
Bergo, V. B., Ntefidou, M., Trivedi, V. D., Amsden, J. J., Kralj, J. M., Rothschild, K. J., and Spudich, J. L. (2006) Conformational changes in the photocycle of Anabaena sensory rhodopsin: absence of the Schiff base counterion protonation signal. J. Biol. Chem. 281, 15208-15214 (Pubitemid 43855110)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.22
, pp. 15208-15214
-
-
Bergo, V.B.1
Ntefidou, M.2
Trivedi, V.D.3
Amsden, J.J.4
Kralj, J.M.5
Rothschild, K.J.6
Spudich, J.L.7
-
16
-
-
33845396371
-
Role of the cytoplasmic domain in Anabaena sensory rhodopsin photocycling: Vectoriality of Schiff base deprotonation
-
DOI 10.1529/biophysj.106.093641
-
Sineshchekov, O. A., Spudich, E. N., Trivedi, V. D., and Spudich, J. L. (2006) Role of the cytoplasmic domain in Anabaena sensory rhodopsin photocycling: vectoriality of Schiff base deprotonation. Biophys. J. 91, 4519-4527 (Pubitemid 44904236)
-
(2006)
Biophysical Journal
, vol.91
, Issue.12
, pp. 4519-4527
-
-
Sineshchekov, O.A.1
Spudich, E.N.2
Trivedi, V.D.3
Spudich, J.L.4
-
17
-
-
33645661754
-
FTIR study of the photoisomerization processes in the 13-cis and all-trans forms of Anabaena sensory rhodopsin at 77 K
-
Kawanabe, A., Furutani, Y., Jung, K. H., and Kandori, H. (2006) FTIR study of the photoisomerization processes in the 13-cis and all-trans forms of Anabaena sensory rhodopsin at 77 K. Biochemistry 45, 4362-4370
-
(2006)
Biochemistry
, vol.45
, pp. 4362-4370
-
-
Kawanabe, A.1
Furutani, Y.2
Jung, K.H.3
Kandori, H.4
-
18
-
-
34447549028
-
Photochromism of Anabaena sensory rhodopsin
-
DOI 10.1021/ja072085a
-
Kawanabe, A., Furutani, Y., Jung, K. H., and Kandori, H. (2007) Photochromism of Anabaena sensory rhodopsin. J. Am. Chem. Soc. 129, 8644-8649 (Pubitemid 47066528)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.27
, pp. 8644-8649
-
-
Kawanabe, A.1
Furutani, Y.2
Jung, K.-H.3
Kandori, H.4
-
19
-
-
52249096568
-
FTIR study of the L intermediate of Anabaena sensory rhodopsin: Structural changes in the cytoplasmic region
-
Kawanabe, A., Furutani, Y., Yoon, S. R., Jung, K. H., and Kandori, H. (2008) FTIR study of the L intermediate of Anabaena sensory rhodopsin: structural changes in the cytoplasmic region. Biochemistry 47, 10033-10040
-
(2008)
Biochemistry
, vol.47
, pp. 10033-10040
-
-
Kawanabe, A.1
Furutani, Y.2
Yoon, S.R.3
Jung, K.H.4
Kandori, H.5
-
20
-
-
8844250818
-
Anabaena sensory rhodopsin: A photochromic color sensor at 2.0 Å
-
DOI 10.1126/science.1103943
-
Vogeley, L., Sineshchekov, O. A., Trivedi, V. D., Sasaki, J., Spudich, J. L., and Luecke, H. (2004) Anabaena sensory rhodopsin: a photochromic color sensor at 2.0 Å. Science 306, 1390-1393 (Pubitemid 39532519)
-
(2004)
Science
, vol.306
, Issue.5700
, pp. 1390-1393
-
-
Vogeley, L.1
Sineshchekov, O.A.2
Trivedi, V.D.3
Sasaki, J.4
Spudich, J.L.5
Luecke, H.6
-
22
-
-
77952691197
-
Chromatic adaptation and the evolution of light color sensing in cyanobacteria
-
Kehoe, D. M. (2010) Chromatic adaptation and the evolution of light color sensing in cyanobacteria. Proc. Natl. Acad. Sci. U.S.A. 107, 9029-9030
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 9029-9030
-
-
Kehoe, D.M.1
-
23
-
-
0023990991
-
Structure and regulation of genes encoding phycocyanin and allophycocyanin from Anabaena variabilis ATCC 29413
-
Johnson, T. R., Haynes, J. I., 2nd, Wealand, J. L., Yarbrough, L. R., and Hirschberg, R. (1988) Structure and regulation of genes encoding phycocyanin and allophycocyanin from Anabaena variabilis ATCC 29413. J. Bacteriol. 170, 1858-1865
-
(1988)
J. Bacteriol.
, vol.170
, pp. 1858-1865
-
-
Johnson, T.R.1
Haynes II, J.I.2
Wealand, J.L.3
Yarbrough, L.R.4
Hirschberg, R.5
-
24
-
-
0345492028
-
Hydrogen Bonding Alteration of Thr-204 in the Complex between pharaonis Phoborhodopsin and Its Transducer Protein
-
DOI 10.1021/bi035678g
-
Sudo, Y., Furutani, Y., Shimono, K., Kamo, N., and Kandori, H. (2003) Hydrogen-bonding alteration of Thr204 in the complex between pharaonis phoborhodopsin and its transducer protein. Biochemistry 42, 14166-14172 (Pubitemid 37499413)
-
(2003)
Biochemistry
, vol.42
, Issue.48
, pp. 14166-14172
-
-
Sudo, Y.1
Furutani, Y.2
Shimono, K.3
Kamo, N.4
Kandori, H.5
-
25
-
-
0019888537
-
Evidence for two functional Gal promoters in intact Escherichia coli cells
-
Aiba, H., Adhya, S., and de Crombrugghe, B. (1981) Evidence for two functional Gal promoters in intact Escherichia coli cells. J. Biol. Chem. 256, 11905-11910
-
(1981)
J. Biol. Chem.
, vol.256
, pp. 11905-11910
-
-
Aiba, H.1
Adhya, S.2
De Crombrugghe, B.3
-
26
-
-
79953178993
-
A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin- like properties
-
Sudo, Y., Ihara, K., Kobayashi, S., Suzuki, D., Irieda, H., Kikukawa, T., Kandori, H., and Homma, M. (2011) A microbial rhodopsin with a unique retinal composition shows both sensory rhodopsin II and bacteriorhodopsin- like properties. J. Biol. Chem. 286, 5967-5976
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 5967-5976
-
-
Sudo, Y.1
Ihara, K.2
Kobayashi, S.3
Suzuki, D.4
Irieda, H.5
Kikukawa, T.6
Kandori, H.7
Homma, M.8
-
27
-
-
1242273896
-
Nascent-peptide-mediated ribosome stalling at a stop codon induces mRNA cleavage resulting in nonstop mRNA that is recognized by tmRNA
-
DOI 10.1261/rna.5169404
-
Sunohara, T., Jojima, K., Yamamoto, Y., Inada, T., and Aiba, H. (2004) Nascent-peptide-mediated ribosome stalling at a stop codon induces mRNA cleavage resulting in nonstop mRNA that is recognized by tmRNA. RNA 10, 378-386 (Pubitemid 38240998)
-
(2004)
RNA
, vol.10
, Issue.3
, pp. 378-386
-
-
Sunohara, T.1
Jojima, K.2
Yamamoto, Y.3
Inada, T.4
Aiba, H.5
-
28
-
-
33745114416
-
Bacteriorhodopsin-like proteins of eubacteria and fungi: The extent of conservation of the haloarchaeal proton-pumping mechanism
-
DOI 10.1039/b514537f
-
Brown, L. S., and Jung, K. H. (2006) Bacteriorhodopsin-like proteins of eubacteria and fungi: the extent of conservation of the haloarchaeal proton- pumping mechanism. Photochem. Photobiol. Sci. 5, 538-546 (Pubitemid 43885917)
-
(2006)
Photochemical and Photobiological Sciences
, vol.5
, Issue.6
, pp. 538-546
-
-
Brown, L.S.1
Jung, K.-H.2
-
30
-
-
0032464280
-
Cyanobacterial phycobilisomes
-
MacColl, R. (1998) Cyanobacterial phycobilisomes. J. Struct. Biol. 124, 311-334
-
(1998)
J. Struct. Biol.
, vol.124
, pp. 311-334
-
-
MacColl, R.1
-
31
-
-
0035853718
-
Tracking the light environment by cyanobacteria and the dynamic nature of light harvesting
-
Grossman, A. R., Bhaya, D., and He, Q. (2001) Tracking the light environment by cyanobacteria and the dynamic nature of light harvesting. J. Biol. Chem. 276, 11449-11452
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 11449-11452
-
-
Grossman, A.R.1
Bhaya, D.2
He, Q.3
-
32
-
-
0034878392
-
- mutant strain of the diazotrophic cyanobacterium Anabaena variabilis showing chromatic adaptation
-
DOI 10.1007/s002840010299
-
Singh, B., Chauhan, V. S., Singh, S., and Bisen, P. S. (2001) Isolation and partial characterization of Het-Fix-mutant strain of the diazotrophic cyanobacterium Anabaena variabilis showing chromatic adaptation. Curr. Microbiol. 43, 265-270 (Pubitemid 32801978)
-
(2001)
Current Microbiology
, vol.43
, Issue.4
, pp. 265-270
-
-
Singh, B.1
Chauhan, V.S.2
Singh, S.3
Bisen, P.S.4
-
33
-
-
3242788085
-
Signal transduction during light-quality acclimation in cyanobacteria: A model system for understanding phytochrome-response pathways in prokaryotes
-
DOI 10.1039/b316952a
-
Stowe-Evans, E. L., and Kehoe, D. M. (2004) Signal transduction during light-quality acclimation in cyanobacteria: a model system for understanding phytochrome-response pathways in prokaryotes. Photochem. Photobiol. Sci. 3, 495-502 (Pubitemid 38968060)
-
(2004)
Photochemical and Photobiological Sciences
, vol.3
, Issue.6
, pp. 495-502
-
-
Stowe-Evans, E.L.1
Kehoe, D.M.2
-
34
-
-
77749324964
-
High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin
-
Shibata, M., Yamashita, H., Uchihashi, T., Kandori, H., and Ando, T. (2010) High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin. Nat. Nanotechnol. 5, 208-212
-
(2010)
Nat. Nanotechnol.
, vol.5
, pp. 208-212
-
-
Shibata, M.1
Yamashita, H.2
Uchihashi, T.3
Kandori, H.4
Ando, T.5
-
35
-
-
79960560407
-
Transmembrane signal transduction in archaeal phototaxis: The sensory rhodopsin II-transducer complex studied by electron paramagnetic resonance spectroscopy
-
Klare, J. P., Bordignon, E., Engelhard, M., and Steinhoff, H. J. (2011) Transmembrane signal transduction in archaeal phototaxis: the sensory rhodopsin II-transducer complex studied by electron paramagnetic resonance spectroscopy. Eur. J. Cell Biol. 90, 731-739
-
(2011)
Eur. J. Cell Biol.
, vol.90
, pp. 731-739
-
-
Klare, J.P.1
Bordignon, E.2
Engelhard, M.3
Steinhoff, H.J.4
-
36
-
-
33646056953
-
Cytoplasmic shuttling of protons in anabaena sensory rhodopsin: Implications for signaling mechanism
-
Shi, L., Yoon, S. R., Bezerra, A. G., Jr., Jung, K. H., and Brown, L. S. (2006) Cytoplasmic shuttling of protons in anabaena sensory rhodopsin: implications for signaling mechanism. J. Mol. Biol. 358, 686-700
-
(2006)
J. Mol. Biol.
, vol.358
, pp. 686-700
-
-
Shi, L.1
Yoon, S.R.2
Bezerra Jr., A.G.3
Jung, K.H.4
Brown, L.S.5
-
37
-
-
0023665183
-
Purification and characterization of RNA polymerase from the cyanobacterium Anabaena 7120
-
Schneider, G. J., Tumer, N. E., Richaud, C., Borbely, G., and Haselkorn, R. (1987) Purification and characterization of RNA polymerase from the cyanobacterium Anabaena 7120. J. Biol. Chem. 262, 14633-14639
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 14633-14639
-
-
Schneider, G.J.1
Tumer, N.E.2
Richaud, C.3
Borbely, G.4
Haselkorn, R.5
-
38
-
-
0025948144
-
Promoter recognition by the RNA polymerase from vegetative cells of the cyanobacterium Anabaena 7120
-
Schneider, G. J., Lang, J. D., and Haselkorn, R. (1991) Promoter recognition by the RNA polymerase from vegetative cells of the cyanobacterium Anabaena 7120. Gene 105, 51-60
-
(1991)
Gene
, vol.105
, pp. 51-60
-
-
Schneider, G.J.1
Lang, J.D.2
Haselkorn, R.3
-
39
-
-
0036021471
-
The 5′-upstream cis-acting sequences of a cyanobacterial psbA gene: Analysis of their roles in basal, light-dependent and circadian transcription
-
DOI 10.1007/s00438-002-0704-3
-
Shibato, J., Agrawal, G. K., Kato, H., Asayama, M., and Shirai, M. (2002) The 5′-upstream cis-acting sequences of a cyanobacterial psbA gene: analysis of their roles in basal, light-dependent and circadian transcription. Mol. Genet. Genomics 267, 684-694 (Pubitemid 34824198)
-
(2002)
Molecular Genetics and Genomics
, vol.267
, Issue.5
, pp. 684-694
-
-
Shibato, J.1
Agrawal, G.2
Kato, H.3
Asayama, M.4
Shirai, M.5
-
40
-
-
10244261494
-
In vitro transcription analysis by reconstituted cyanobacterial RNA polymerase: Roles of group 1 and 2 sigma factors and a core subunit, RpoC2
-
DOI 10.1111/j.1365-2443.2004.00808.x
-
Imamura, S., Asayama, M., and Shirai, M. (2004) In vitro transcription analysis by reconstituted cyanobacterial RNA polymerase: roles of group 1 and 2 σ factors and a core subunit, RpoC2. Genes Cells 9, 1175-1187 (Pubitemid 39618532)
-
(2004)
Genes to Cells
, vol.9
, Issue.12
, pp. 1175-1187
-
-
Imamura, S.1
Asayama, M.2
Shirai, M.3
-
41
-
-
33947411277
-
Cooperation of group 2 σ factors, SigD and SigE for light-induced transcription in the cyanobacterium Synechocystis sp. PCC 6803
-
DOI 10.1016/j.febslet.2007.03.010, PII S0014579307002608
-
Yoshimura, T., Imamura, S., Tanaka, K., Shirai, M., and Asayama, M. (2007) Cooperation of group 2 σ factors, SigD and SigE, for light-induced transcription in the cyanobacterium Synechocystis sp. PCC 6803. FEBS Lett. 581, 1495-1500 (Pubitemid 46452630)
-
(2007)
FEBS Letters
, vol.581
, Issue.7
, pp. 1495-1500
-
-
Yoshimura, T.1
Imamura, S.2
Tanaka, K.3
Shirai, M.4
Asayama, M.5
|