-
1
-
-
0034734230
-
Proton transport by sensory rhodopsins and its modulation by transducer-binding
-
Sasaki, J., and Spudich, J. L. (2000) Proton transport by sensory rhodopsins and its modulation by transducer-binding, Biochim. Biophys. Acta 1460, 230-239.
-
(2000)
Biochim. Biophys. Acta
, vol.1460
, pp. 230-239
-
-
Sasaki, J.1
Spudich, J.L.2
-
2
-
-
0035498353
-
Photochemistry and photoinduced proton-transfer by pharaonis phoborhodopsin
-
Kamo, N., Shimono, K., Iwamoto, M., and Sudo, Y. (2001) Photochemistry and photoinduced proton-transfer by pharaonis phoborhodopsin, Biochemistry (Moscow) 66, 1277-1282.
-
(2001)
Biochemistry (Moscow)
, vol.66
, pp. 1277-1282
-
-
Kamo, N.1
Shimono, K.2
Iwamoto, M.3
Sudo, Y.4
-
3
-
-
0033529279
-
The nop-1 gene of Neurospora crassa encodes a seven transmembrane helix retinal-binding protein homologous to archaeal rhodopsins
-
Bieszke, J. A., Braun, E. L., Bean, L. E., Kang, S., Natvig, D. O., and Borkovich, K. A. (1999) The nop-1 gene of Neurospora crassa encodes a seven transmembrane helix retinal-binding protein homologous to archaeal rhodopsins, Proc. Natl. Acad. Sci. U.S.A. 96, 8034-8039.
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 8034-8039
-
-
Bieszke, J.A.1
Braun, E.L.2
Bean, L.E.3
Kang, S.4
Natvig, D.O.5
Borkovich, K.A.6
-
4
-
-
0037173051
-
Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardiii
-
Sineshchekov, O. A., Jung, K. H., and Spudich, J. L. (2002) Two rhodopsins mediate phototaxis to low- and high-intensity light in Chlamydomonas reinhardiii, Proc. Natl. Acad. Sci. U.S.A. 99, 8689-8694.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 8689-8694
-
-
Sineshchekov, O.A.1
Jung, K.H.2
Spudich, J.L.3
-
5
-
-
0037189362
-
Channelrhodopsin-1: A light-gated proton channel in green algae
-
Nagel, G., Ollig, D., Fuhrmann, M., Kateriya, S., Musti, A. M., Bamberg, E., and Hegemann, P. (2002) Channelrhodopsin-1: A light-gated proton channel in green algae, Science 296, 2395-2398.
-
(2002)
Science
, vol.296
, pp. 2395-2398
-
-
Nagel, G.1
Ollig, D.2
Fuhrmann, M.3
Kateriya, S.4
Musti, A.M.5
Bamberg, E.6
Hegemann, P.7
-
6
-
-
0038009383
-
Novel dinoflagellate clock-related genes identified through microarray analysis
-
Okamoto, O. K., and Hastings, J. W. (2003) Novel dinoflagellate clock-related genes identified through microarray analysis, J. Phycol. 39, 519-526.
-
(2003)
J. Phycol.
, vol.39
, pp. 519-526
-
-
Okamoto, O.K.1
Hastings, J.W.2
-
7
-
-
85056356471
-
Microbial rhodopsins: Transport and sensory proteins throughout the three domains of life
-
(Horspool, W. M., and Lenci, F., Eds.) 2nd ed., Section II Photobiology . CRC Press, Boca Raton, FL
-
Jung, K. H., and Spudich, J. L. (2004) Microbial rhodopsins: Transport and sensory proteins throughout the three domains of life, in CRC Handbook of Organic Photochemistry and Photobiology (Horspool, W. M., and Lenci, F., Eds.) 2nd ed., Section II Photobiology, pp 124/1-124/11. CRC Press, Boca Raton, FL.
-
(2004)
CRC Handbook of Organic Photochemistry and Photobiology
-
-
Jung, K.H.1
Spudich, J.L.2
-
8
-
-
0242331634
-
Proteorhodopsin genes are distributed among divergent marine bacterial taxa
-
de la Torre, J. R., Christianson, L. M., Beja, O., Suzuki, M. T., Karl, D. M., Heidelberg, J., and DeLong, E. F. (2003) Proteorhodopsin genes are distributed among divergent marine bacterial taxa, Proc. Natl. Acad. Sci. U.S.A. 100, 12830-12835.
-
(2003)
Proc. Natl. Acad. Sci. U.S.A.
, vol.100
, pp. 12830-12835
-
-
De La Torre, J.R.1
Christianson, L.M.2
Beja, O.3
Suzuki, M.T.4
Karl, D.M.5
Heidelberg, J.6
DeLong, E.F.7
-
9
-
-
0034665853
-
Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea
-
Beja, O., Aravind, L., Koonin, E. V., Suzuki, M. T., Hadd, A., Nguyen, L. P., Jovanovich, S. B., Gates, C. M., Feldman, R. A., Spudich, J. L., Spudich, E. N., and DeLong, E. F. (2000) Bacterial rhodopsin: Evidence for a new type of phototrophy in the sea, Science 289, 1902-1906.
-
(2000)
Science
, vol.289
, pp. 1902-1906
-
-
Beja, O.1
Aravind, L.2
Koonin, E.V.3
Suzuki, M.T.4
Hadd, A.5
Nguyen, L.P.6
Jovanovich, S.B.7
Gates, C.M.8
Feldman, R.A.9
Spudich, J.L.10
Spudich, E.N.11
DeLong, E.F.12
-
10
-
-
0037346546
-
Demonstration of a sensory rhodopsin in eubacteria
-
Jung, K. H., Trivedi, V. D., and Spudich, J. L. (2003) Demonstration of a sensory rhodopsin in eubacteria, Mol. Microbiol. 47, 1513-1522.
-
(2003)
Mol. Microbiol.
, vol.47
, pp. 1513-1522
-
-
Jung, K.H.1
Trivedi, V.D.2
Spudich, J.L.3
-
11
-
-
8844250818
-
Anabaena sensory rhodopsin: A photochromic color sensor at 2.0 Å
-
Vogeley, L., Sineshchekov, O. A., Trivedi, V. D., Sasaki, J., Spudich, J. L., and Luecke, H. (2004) Anabaena sensory rhodopsin: A photochromic color sensor at 2.0 Å, Science 306, 1390-1393.
-
(2004)
Science
, vol.306
, pp. 1390-1393
-
-
Vogeley, L.1
Sineshchekov, O.A.2
Trivedi, V.D.3
Sasaki, J.4
Spudich, J.L.5
Luecke, H.6
-
12
-
-
0033612539
-
Positioning proton-donating residues to the Schiff-base accelerates the M-decay of pharaonis phoborhodopsin expressed in Escherichia coli
-
Iwamoto, M., Shimono, K., Sumi, M., and Kamo, N. (1999) Positioning proton-donating residues to the Schiff-base accelerates the M-decay of pharaonis phoborhodopsin expressed in Escherichia coli, Biophys. Chem. 79, 187-192.
-
(1999)
Biophys. Chem.
, vol.79
, pp. 187-192
-
-
Iwamoto, M.1
Shimono, K.2
Sumi, M.3
Kamo, N.4
-
13
-
-
3543020365
-
Hydration switch model for the proton transfer in the Schiff base region of bacteriorhodopsin
-
Kandori, H. (2004) Hydration switch model for the proton transfer in the Schiff base region of bacteriorhodopsin. Biochim. Biophys. Acta 1658, 72-79.
-
(2004)
Biochim. Biophys. Acta
, vol.1658
, pp. 72-79
-
-
Kandori, H.1
-
14
-
-
0034734254
-
Role of internal water molecules in bacteriorhodopsin
-
Kandori, H. (2000) Role of internal water molecules in bacteriorhodopsin, Biochim. Biophys. Acta 1460, 177-191.
-
(2000)
Biochim. Biophys. Acta
, vol.1460
, pp. 177-191
-
-
Kandori, H.1
-
15
-
-
0242362271
-
Water Molecules in the Schiff Base Region of Bacteriorhodopsin
-
Shibata, M., Tanimoto, T., and Kandori, H. (2003) Water Molecules in the Schiff Base Region of Bacteriorhodopsin, J. Am. Chem. Soc. 125, 13312-13313.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 13312-13313
-
-
Shibata, M.1
Tanimoto, T.2
Kandori, H.3
-
16
-
-
0037418568
-
Structural changes of water in the Schiff base region of bacteriorhodopsin: Proposal of a hydration switch model
-
Tanimoto, T., Furutani, Y., and Kandori, H. (2003) Structural changes of water in the Schiff base region of bacteriorhodopsin: Proposal of a hydration switch model, Biochemistry 42, 2300-2306.
-
(2003)
Biochemistry
, vol.42
, pp. 2300-2306
-
-
Tanimoto, T.1
Furutani, Y.2
Kandori, H.3
-
17
-
-
24944531148
-
Strongly hydrogen-bonded water molecules in the Schiff base region of rhodopsins
-
in press
-
Furutani, Y., Shibata, M., and Kandori, H. (2005) Strongly hydrogen-bonded water molecules in the Schiff base region of rhodopsins, Photochem. Photobiol. Sci. (in press).
-
(2005)
Photochem. Photobiol. Sci.
-
-
Furutani, Y.1
Shibata, M.2
Kandori, H.3
-
18
-
-
0035822679
-
Structural changes of pharaonis phoborhodopsin upon photoisomerization of the retinal chromophore: Infrared spectral comparison with bacteriorhodopsin
-
Kandori, H., Shimono, K., Sudo, Y., Iwamoto, M., Shichida, Y., and Kamo, N. (2001) Structural changes of pharaonis phoborhodopsin upon photoisomerization of the retinal chromophore: Infrared spectral comparison with bacteriorhodopsin, Biochemistry 40, 9238-9246.
-
(2001)
Biochemistry
, vol.40
, pp. 9238-9246
-
-
Kandori, H.1
Shimono, K.2
Sudo, Y.3
Iwamoto, M.4
Shichida, Y.5
Kamo, N.6
-
19
-
-
0017741644
-
Resonance Raman studies of the purple membrane
-
Aton, B., Doukas, A. G., Callender, R. H., Becher, B., and Ebrey, T. G. (1977) Resonance Raman studies of the purple membrane, Biochemistry 16, 2995-2999.
-
(1977)
Biochemistry
, vol.16
, pp. 2995-2999
-
-
Aton, B.1
Doukas, A.G.2
Callender, R.H.3
Becher, B.4
Ebrey, T.G.5
-
20
-
-
0024278418
-
Fourier transform infrared study of the halorhodopsin chloride pump
-
Rothschild, K. J., Bousche, O., Braiman, M. S., Hasselbacher, C. A., and Spudich, J. L. (1988) Fourier transform infrared study of the halorhodopsin chloride pump, Biochemistry 27, 2420-2424.
-
(1988)
Biochemistry
, vol.27
, pp. 2420-2424
-
-
Rothschild, K.J.1
Bousche, O.2
Braiman, M.S.3
Hasselbacher, C.A.4
Spudich, J.L.5
-
21
-
-
0001268741
-
Vibrational analysis of the all-trans-retinal chromophore in light-adapted bacteriorhodopsin
-
Smith, S. O., Braiman, M. S., Myers, A. B., Pardoen, J. A., Courtin, J. M. L., Winkel, C., Lugtenburg, J., and Mathies, R. A. (1987) Vibrational analysis of the all-trans-retinal chromophore in light-adapted bacteriorhodopsin, J. Am. Chem. Soc. 109, 3108-3125.
-
(1987)
J. Am. Chem. Soc.
, vol.109
, pp. 3108-3125
-
-
Smith, S.O.1
Braiman, M.S.2
Myers, A.B.3
Pardoen, J.A.4
Courtin, J.M.L.5
Winkel, C.6
Lugtenburg, J.7
Mathies, R.A.8
-
22
-
-
0020008581
-
Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: Evidence for a distorted 13-cis retinal chromophore
-
Braiman, M., and Mathies, R. (1982) Resonance Raman spectra of bacteriorhodopsin's primary photoproduct: Evidence for a distorted 13-cis retinal chromophore, Proc. Natl. Acad. Sci. U.S.A. 79, 403-407.
-
(1982)
Proc. Natl. Acad. Sci. U.S.A.
, vol.79
, pp. 403-407
-
-
Braiman, M.1
Mathies, R.2
-
23
-
-
0024287281
-
Tyrosine protonation changes in bacteriorhodopsin. A Fourier transform infrared study of BR548 and its primary photoproduct
-
Roepe, P. D., Ahl, P. L., Herzfeld, J., Lugtenburg, J., and Rothschild, K. J. (1988) Tyrosine protonation changes in bacteriorhodopsin. A Fourier transform infrared study of BR548 and its primary photoproduct, J. Biol. Chem. 263, 5110-5117.
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 5110-5117
-
-
Roepe, P.D.1
Ahl, P.L.2
Herzfeld, J.3
Lugtenburg, J.4
Rothschild, K.J.5
-
24
-
-
84989669798
-
Fourier transform infrared spectral studies on the Schiff base mode of all-trans bacteriorhodopsin and its photointermediates, K and L
-
Maeda, A., Sasaki, J., Pfefferle, J. M., Shichida, Y., and Yoshizawa, T. (1991) Fourier transform infrared spectral studies on the Schiff base mode of all-trans bacteriorhodopsin and its photointermediates, K and L, Photochem. Photobiol. 54, 911-921.
-
(1991)
Photochem. Photobiol.
, vol.54
, pp. 911-921
-
-
Maeda, A.1
Sasaki, J.2
Pfefferle, J.M.3
Shichida, Y.4
Yoshizawa, T.5
-
25
-
-
0037133499
-
Interaction of internal water molecules with the schiff base in the L intermediate of the bacteriorhodopsin photocycle
-
Maeda, A., Balashov, S. P., Lugtenburg, J., Verhoeven, M. A., Herzfeld, J., Belenky, M., Gennis, R. B., Tomson, F. L., and Ebrey, T. G. (2002) Interaction of internal water molecules with the schiff base in the L intermediate of the bacteriorhodopsin photocycle, Biochemistry 41, 3803-3809.
-
(2002)
Biochemistry
, vol.41
, pp. 3803-3809
-
-
Maeda, A.1
Balashov, S.P.2
Lugtenburg, J.3
Verhoeven, M.A.4
Herzfeld, J.5
Belenky, M.6
Gennis, R.B.7
Tomson, F.L.8
Ebrey, T.G.9
-
26
-
-
3342894772
-
FTIR spectroscopy of the K photointermediate of Neurospora rhodopsin: Structural changes of the retinal, protein, and water molecules after photoisomerization
-
Furutani, Y., Bezerra, A. G., Jr., Waschuk, S., Sumii, M., Brown, L. S., and Kandori, H. (2004) FTIR spectroscopy of the K photointermediate of Neurospora rhodopsin: Structural changes of the retinal, protein, and water molecules after photoisomerization, Biochemistry 43, 9636-9646.
-
(2004)
Biochemistry
, vol.43
, pp. 9636-9646
-
-
Furutani, Y.1
Bezerra Jr., A.G.2
Waschuk, S.3
Sumii, M.4
Brown, L.S.5
Kandori, H.6
-
27
-
-
0003447441
-
-
Academic Press, New York
-
Lin-Vien, D., Colthup, N. B., Fateley, W. G., and Grasselli, J. G. (1991) The Handbook of Infrared and Raman Characteristic Frequencies of Organic Molecules, Academic Press, New York.
-
(1991)
The Handbook of Infrared and Raman Characteristic Frequencies of Organic Molecules
-
-
Lin-Vien, D.1
Colthup, N.B.2
Fateley, W.G.3
Grasselli, J.G.4
-
28
-
-
0023959207
-
Analysis of the factors that influence the C=N stretching frequency of polyene Schiff bases. Implications for bacteriorhodopsin and rhodopsin
-
Rodman-Gilson, H. S., Honig, B., Croteau, A., Zarrilli, G., and Nakanishi, K. (1988) Analysis of the factors that influence the C=N stretching frequency of polyene Schiff bases. Implications for bacteriorhodopsin and rhodopsin, Biophys. J. 53, 261-269.
-
(1988)
Biophys. J.
, vol.53
, pp. 261-269
-
-
Rodman-Gilson, H.S.1
Honig, B.2
Croteau, A.3
Zarrilli, G.4
Nakanishi, K.5
-
29
-
-
0023228884
-
Factors affecting the C=N stretching in protonated retinal Schiff base: A model study for bacteriorhodopsin and visual pigments
-
Baasov, T., Friedman, N., and Sheves, M. (1987) Factors affecting the C=N stretching in protonated retinal Schiff base: A model study for bacteriorhodopsin and visual pigments, Biochemistry 26, 3210-3217.
-
(1987)
Biochemistry
, vol.26
, pp. 3210-3217
-
-
Baasov, T.1
Friedman, N.2
Sheves, M.3
-
30
-
-
0037076526
-
Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization
-
Kandori, H., Belenky, M., and Herzfeld, J. (2002) Vibrational frequency and dipolar orientation of the protonated Schiff base in bacteriorhodopsin before and after photoisomerization, Biochemistry 41, 6026-6031.
-
(2002)
Biochemistry
, vol.41
, pp. 6026-6031
-
-
Kandori, H.1
Belenky, M.2
Herzfeld, J.3
-
31
-
-
0024024413
-
Aspartic acid substitutions affect proton translocation by bacteriorhodopsin
-
Mogi, T., Stern, L. J., Marti, T., Chao, B. H., and Khorana, H. G. (1988) Aspartic acid substitutions affect proton translocation by bacteriorhodopsin. Proc. Natl. Acad. Sci. U.S.A. 85, 4148-4152.
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 4148-4152
-
-
Mogi, T.1
Stern, L.J.2
Marti, T.3
Chao, B.H.4
Khorana, H.G.5
-
32
-
-
0037046146
-
Interaction of Asn105 with the retinal chromophore during photoisomerization of pharaonis phoborhodopsin
-
Kandori, H., Shimono, K., Shichida, Y., and Kamo, N. (2002) Interaction of Asn105 with the retinal chromophore during photoisomerization of pharaonis phoborhodopsin, Biochemistry 41, 4554-4559.
-
(2002)
Biochemistry
, vol.41
, pp. 4554-4559
-
-
Kandori, H.1
Shimono, K.2
Shichida, Y.3
Kamo, N.4
-
33
-
-
0020489247
-
Infrared spectrum of the purple membrane: Clue to a proton conduction mechanism?
-
Krimm, S., and Dwivedi, A. M. (1982) Infrared spectrum of the purple membrane: Clue to a proton conduction mechanism? Science 216, 407-408.
-
(1982)
Science
, vol.216
, pp. 407-408
-
-
Krimm, S.1
Dwivedi, A.M.2
-
34
-
-
0029883202
-
Hydrogen bonds of water and C=O groups coordinate long-range structural changes in the L photointermediate of bacteriorhodopsin
-
Yamazaki, Y., Tuzi, S., Saito, H., Kandori, H., Needleman, R., Lanyi, J. K., and Maeda, A. (1996) Hydrogen bonds of water and C=O groups coordinate long-range structural changes in the L photointermediate of bacteriorhodopsin, Biochemistry 35, 4063-4068.
-
(1996)
Biochemistry
, vol.35
, pp. 4063-4068
-
-
Yamazaki, Y.1
Tuzi, S.2
Saito, H.3
Kandori, H.4
Needleman, R.5
Lanyi, J.K.6
Maeda, A.7
-
35
-
-
0034731017
-
Direct observation of the bridged water stretching vibrations inside a protein
-
Kandori, H., and Shichida, Y. (2000) Direct Observation of the Bridged Water Stretching Vibrations Inside a Protein, J. Am. Chem. Soc. 122, 11745-11746.
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 11745-11746
-
-
Kandori, H.1
Shichida, Y.2
-
36
-
-
4344595068
-
Role of hydrogen-bond network in energy storage of bacteriorhodopsin's light-driven proton pump revealed by ab initio normal-mode analysis
-
Hayashi, S., Tajkhorshid, E., Kandori, H., and Schulten, K. (2004) Role of hydrogen-bond network in energy storage of bacteriorhodopsin's light-driven proton pump revealed by ab initio normal-mode analysis, J. Am. Chem. Soc. 126, 10516-10517.
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 10516-10517
-
-
Hayashi, S.1
Tajkhorshid, E.2
Kandori, H.3
Schulten, K.4
-
37
-
-
0035951066
-
Internal water molecules of pharaonis phoborhodopsin studied by low-temperature infrared spectroscopy
-
Kandori, H., Furutani, Y., Shimono, K., Shichida, Y., and Kamo, N. (2001) Internal water molecules of pharaonis phoborhodopsin studied by low-temperature infrared spectroscopy, Biochemistry 40, 15693-15698.
-
(2001)
Biochemistry
, vol.40
, pp. 15693-15698
-
-
Kandori, H.1
Furutani, Y.2
Shimono, K.3
Shichida, Y.4
Kamo, N.5
-
38
-
-
0035852677
-
Tight Asp-85-Thr-89 association during the pump switch of bacteriorhodopsin
-
Kandori, H., Yamazaki, Y., Shichida, Y., Raap, J., Lugtenburg, J., Belenky, M., and Herzfeld, J. (2001) Tight Asp-85-Thr-89 association during the pump switch of bacteriorhodopsin, Proc. Natl. Acad. Sci. U.S.A. 98, 1571-1576.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 1571-1576
-
-
Kandori, H.1
Yamazaki, Y.2
Shichida, Y.3
Raap, J.4
Lugtenburg, J.5
Belenky, M.6
Herzfeld, J.7
-
39
-
-
0033609517
-
Structural change of threonine 89 upon photoisomerization in bacteriorhodopsin as revealed by polarized FTIR spectroscopy
-
Kandori, H., Kinoshita, N., Yamazaki, Y., Maeda, A., Shichida, Y., Needleman, R., Lanyi, J. K., Bizounok, M., Herzfeld, J., Raap, J., and Lugtenburg, J. (1999) Structural change of threonine 89 upon photoisomerization in bacteriorhodopsin as revealed by polarized FTIR spectroscopy, Biochemistry 38, 9676-9683.
-
(1999)
Biochemistry
, vol.38
, pp. 9676-9683
-
-
Kandori, H.1
Kinoshita, N.2
Yamazaki, Y.3
Maeda, A.4
Shichida, Y.5
Needleman, R.6
Lanyi, J.K.7
Bizounok, M.8
Herzfeld, J.9
Raap, J.10
Lugtenburg, J.11
-
40
-
-
84988202078
-
Ultraviolet resonance Raman spectroscopy of X-proline bonds: A new marker band of hydrogen bonding at the imide C=O site
-
Takeuchi, H., and Harada, I. (1990) Ultraviolet resonance Raman spectroscopy of X-proline bonds: A new marker band of hydrogen bonding at the imide C=O site, J. Raman Spectrosc. 21, 509-515.
-
(1990)
J. Raman Spectrosc.
, vol.21
, pp. 509-515
-
-
Takeuchi, H.1
Harada, I.2
-
41
-
-
0024791125
-
Fourier transform infrared evidence for proline structural changes during the bacteriorhodopsin photocycle
-
Rothschild, K. J., He, Y. W., Gray, D., Roepe, P. D., Pelletier, S. L., Brown, R. S., and Herzfeld, J. (1989) Fourier transform infrared evidence for proline structural changes during the bacteriorhodopsin photocycle, Proc. Natl. Acad. Sci. U.S.A. 86, 9832-9835.
-
(1989)
Proc. Natl. Acad. Sci. U.S.A.
, vol.86
, pp. 9832-9835
-
-
Rothschild, K.J.1
He, Y.W.2
Gray, D.3
Roepe, P.D.4
Pelletier, S.L.5
Brown, R.S.6
Herzfeld, J.7
-
42
-
-
0035964365
-
X-ray structure of sensory rhodopsin II at 2.1-Å resolution
-
Royant, A., Nollert, P., Edman, K., Neutze, R., Landau, E. M., Pebay-Peyroula, E., and Navarro, J. (2001) X-ray structure of sensory rhodopsin II at 2.1-Å resolution, Proc. Natl. Acad. Sci. U.S.A. 98, 10131-10136.
-
(2001)
Proc. Natl. Acad. Sci. U.S.A.
, vol.98
, pp. 10131-10136
-
-
Royant, A.1
Nollert, P.2
Edman, K.3
Neutze, R.4
Landau, E.M.5
Pebay-Peyroula, E.6
Navarro, J.7
-
43
-
-
0033609904
-
Structure of bacteriorhodopsin at 1.55 Å resolution
-
Luecke, H., Schobert, B., Richter, H. T., Cartailler, J. P., and Lanyi, J. K. (1999) Structure of bacteriorhodopsin at 1.55 Å resolution, J. Mol. Biol. 291, 899-911.
-
(1999)
J. Mol. Biol.
, vol.291
, pp. 899-911
-
-
Luecke, H.1
Schobert, B.2
Richter, H.T.3
Cartailler, J.P.4
Lanyi, J.K.5
-
44
-
-
0035943457
-
Crystal structure of sensory rhodopsin II at 2.4 Å: Insights into color tuning and transducer interaction
-
Luecke, H., Schobert, B., Lanyi, J. K., Spudich, E. N., and Spudich, J. L. (2001) Crystal structure of sensory rhodopsin II at 2.4 Å: Insights into color tuning and transducer interaction, Science 293, 1499-1503.
-
(2001)
Science
, vol.293
, pp. 1499-1503
-
-
Luecke, H.1
Schobert, B.2
Lanyi, J.K.3
Spudich, E.N.4
Spudich, J.L.5
-
45
-
-
18844385503
-
FTIR studies of internal water molecules in the Schiff base region of bacteriorhodopsin
-
Shibata, M., and Kandori, H. (2005) FTIR studies of internal water molecules in the Schiff base region of bacteriorhodopsin, Biochemistry 44, 7406-7413.
-
(2005)
Biochemistry
, vol.44
, pp. 7406-7413
-
-
Shibata, M.1
Kandori, H.2
-
46
-
-
3042586763
-
Internal water molecules of light-driven chloride pump proteins
-
Shibata, M., Muneda, N., Ihara, K., Sasaki, T., Demura, M., and Kandori, H. (2004) Internal water molecules of light-driven chloride pump proteins, Chem. Phys. Lett. 392, 330-333.
-
(2004)
Chem. Phys. Lett.
, vol.392
, pp. 330-333
-
-
Shibata, M.1
Muneda, N.2
Ihara, K.3
Sasaki, T.4
Demura, M.5
Kandori, H.6
-
47
-
-
0042967503
-
Structural changes of water molecules during the photoactivation processes in bovine rhodopsin
-
Furutani, Y., Shichida, Y., and Kandori, H. (2003) Structural changes of water molecules during the photoactivation processes in bovine rhodopsin, Biochemistry 42, 9619-9625.
-
(2003)
Biochemistry
, vol.42
, pp. 9619-9625
-
-
Furutani, Y.1
Shichida, Y.2
Kandori, H.3
-
48
-
-
0031473847
-
SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling
-
Guex, N., and Peitsch, M. C. (1997) SWISS-MODEL and the Swiss-PdbViewer: An environment for comparative protein modeling. Electrophoresis 18, 2714-2723.
-
(1997)
Electrophoresis
, vol.18
, pp. 2714-2723
-
-
Guex, N.1
Peitsch, M.C.2
-
49
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., Higgins, D. G., and Gibson, T. J. (1994) CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice, Nucleic Acids Res. 22, 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
50
-
-
0000557270
-
Protein structural changes in bacteriorhodopsin upon photoisomerization as revealed by polarized FTIR spectroscopy
-
Kandori, H., Kinoshita, N., Shichida, Y., and Maeda, A. (1998) Protein structural changes in bacteriorhodopsin upon photoisomerization as revealed by polarized FTIR spectroscopy, J. Phys. Chem. B 102, 7899-7905.
-
(1998)
J. Phys. Chem. B
, vol.102
, pp. 7899-7905
-
-
Kandori, H.1
Kinoshita, N.2
Shichida, Y.3
Maeda, A.4
|