In planta transient expression analysis of monoterpene synthases

Methods in Enzymology

Volumn 515, Issue , 2012, Pages 43-61

  Green, Sol A ^a   Chen, Xiuyin ^a   Matich, Adam J ^a  

^a THE NEW ZEALAND INSTITUTE FOR PLANT AND FOOD RESEARCH LIMITED   (New Zealand)

Author keywords

Agrobacterium tumefaciens; Terpene; Terpene synthase; Tobacco; Transient expression

Indexed keywords

COMPLEMENTARY DNA; ENZYME; GENOMIC DNA; LINALOOL SYNTHASE; MONOTERPENE SYNTHASE; TERPENE DERIVATIVE; UNCLASSIFIED DRUG; VOLATILE ORGANIC COMPOUND;

ARTICLE; CLONING; CONTROLLED STUDY; ENZYME ANALYSIS; EXPRESSION VECTOR; EXTRACTION; GENETIC ANALYSIS; HIGH THROUGHPUT SCREENING; KIWIFRUIT; NICOTIANA BENTHAMIANA; NONHUMAN; PLANT; PRIORITY JOURNAL; PROTEIN EXPRESSION; PROTEIN FUNCTION; QUALITATIVE ANALYSIS; QUANTITATIVE ANALYSIS; RHIZOBIUM RADIOBACTER; SPIN TRAPPING;

AGROBACTERIUM; AGROBACTERIUM TUMEFACIENS; ESCHERICHIA COLI; NICOTIANA TABACUM;

EID: 84866505605     PISSN: 00766879     EISSN: 15577988     Source Type: Book Series    
DOI: 10.1016/B978-0-12-394290-6.00003-3     Document Type: Chapter

References (45)

1. A. Aharoni, A.P. Giri, F.W.A. Verstappen, C.M. Bertea, R. Sevenier, and Z. Sun Gain and loss of fruit flavor compounds produced by wild and cultivated strawberry species The Plant Cell 16 2004 3110 3131 (Pubitemid 41075756)
2. M. Alvarez, E. Topal, F. Martin, and G. Cardineau Higher accumulation of F1-V fusion recombinant protein in plants after induction of protein body formation Plant Molecular Biology 72 2010 75 89
3. I. Atanassov, I. Atanassov, J.P. Etchells, and S. Turner A simple, flexible and efficient PCR-fusion/Gateway cloning procedure for gene fusion, site-directed mutagenesis, short sequence insertion and domain deletions and swaps Plant Methods 5 2009 14
4. J.-E. Bassard, J. Mutterer, F. Duval, and D. Werck-Reichhart A novel method for monitoring the localization of cytochromes P450 and other endoplasmic reticulum membrane associated proteins: A tool for investigating the formation of metabolons The FEBS Journal 279 2012 1576 1583
5. P. Bleeker, E. Spyropoulou, P. Diergaarde, H. Volpin, M. De Both, and P. Zerbe RNA-seq discovery, functional characterization, and comparison of sesquiterpene synthases from Solanum lycopersicum and Solanum habrochaites trichomes Plant Molecular Biology 77 2011 323 336
6. C. Brendolise, Y.-K. Yauk, E.D. Eberhard, M. Wang, D. Chagne, and C. Andre An unusual plant triterpene synthase with predominant α-amyrin- producing activity identified by characterizing oxidosqualene cyclases from Malus × domestica The FEBS Journal 278 2011 2485 2499
7. F. Chen, D. Tholl, J. Bohlmann, and E. Pichersky The family of terpene synthases in plants: A mid-size family of genes for specialized metabolism that is highly diversified throughout the kingdom The Plant Journal 66 2011 212 229
8. X. Chen, Y. Yauk, N.J. Nieuwenhuizen, A.J. Matich, M.Y. Wang, and R.L. Perez Characterisation of an (S)-linalool synthase from kiwifruit (Actinidia arguta) that catalyses the first committed step in the production of floral lilac compounds Functional Plant Biology 37 2010 232 243
9. Q.-J. Chen, H.-M. Zhou, J. Chen, and X.-C. Wang A Gateway-based platform for multigene plant transformation Plant Molecular Biology 62 2006 927 936 (Pubitemid 44730328)
10. J. Condori, G. Medrano, G. Sivakumar, V. Nair, C. Cramer, and F. Medina-Bolivar Functional characterization of a stilbene synthase gene using a transient expression system in planta Plant Cell Reports 28 2009 589 599
11. M. Dubin, C. Bowler, and G. Benvenuto A modified Gateway cloning strategy for overexpressing tagged proteins in plants Plant Methods 4 2008 3
12. V. Falara, T.A. Akhtar, T.T.H. Nguyen, E.A. Spyropoulou, P.M. Bleeker, and I. Schauvinhold The tomato terpene synthase gene family Plant Physiology 157 2011 770 789
13. C. Gehl, D. Kaufholdt, D. Hamisch, R. Bikker, J. Kudla, and R.R. Mendel Quantitative analysis of dynamic protein-protein interactions in planta by a floated-leaf luciferase complementation imaging (FLuCI) assay using binary Gateway vectors The Plant Journal 67 2011 542 553
14. S.B. Gelvin Agrobacterium and plant genes involved in T-DNA transfer and integration Annual Review of Plant Physiology and Plant Molecular Biology 51 2000 223 256
15. S.B. Gelvin Agrobacterium-mediated plant transformation: The biology behind the "gene-jockeying" tool Microbiology and Molecular Biology Reviews 67 2003 16 37 (Pubitemid 36314782)
16. S.A. Green, X. Chen, N.J. Nieuwenhuizen, A.J. Matich, M.Y. Wang, and B.J. Bunn Identification, functional characterization, and regulation of the enzyme responsible for floral (E)-nerolidol biosynthesis in kiwifruit (Actinidia chinensis) Journal of Experimental Botany 63 2012 1951 1967
17. J.L. Hartley, G.F. Temple, and M.A. Brasch DNA cloning using in vitro site-specific recombination Genome Research 10 2000 1788 1795
18. R. Hellens, A. Allan, E. Friel, K. Bolitho, K. Grafton, and M. Templeton Transient expression vectors for functional genomics, quantification of promoter activity and RNA silencing in plants Plant Methods 1 2005 13
19. T. Ikemura Codon usage and tRNA content in unicellular and multicellular organisms Molecular Biology and Evolution 2 1985 13 34 (Pubitemid 15152046)
20. L.K. Johansen, and J.C. Carrington Silencing on the spot. Induction and suppression of RNA silencing in the Agrobacterium-mediated transient expression system Plant Physiology 126 2001 930 938 (Pubitemid 32656780)
21. J. Kapila, R. DeRycke, M. VanMontagu, and G. Angenon An Agrobacterium-mediated transient gene expression system for intact leaves Plant Science 122 1997 101 108
22. C. Keeling, S. Weisshaar, S. Ralph, S. Jancsik, B. Hamberger, and H. Dullat Transcriptome mining, functional characterization, and phylogeny of a large terpene synthase gene family in spruce (Picea spp.) BMC Plant Biology 11 2011 43
23. C. Koncz, and J. Schell The promoter of Tl-DNA gene 5 controls the tissue-specific expression of chimeric genes carried by a novel type of Agrobacterium binary vector Molecular and General Genetics 204 1986 383 396
24. S. Köthke, and M. Köck The Solanum lycopersicum RNaseLER is a class II enzyme of the RNase T2 family and shows preferential expression in guard cells Journal of Plant Physiology 168 2011 840 847
25. L. Krusell, N. Sato, I. Fukuhara, B.E.V. Koch, C. Grossmann, and S. Okamoto The Clavata2 genes of pea and Lotus japonicus affect autoregulation of nodulation The Plant Journal 65 2011 861 871
26. H.K. Lichtenthaler The 1-deoxy-D-xylulose-5-phosphate pathway of isoprenoid biosynthesis in plants Annual Review of Plant Physiology and Plant Molecular Biology 50 1999 47 65 (Pubitemid 129493120)
27. Q. Liu, M. Majdi, K. Cankar, M. Goedbloed, T. Charnikhova, and F.W.A. Verstappen Reconstitution of the costunolide biosynthetic pathway in yeast and Nicotiana benthamiana PLoS One 6 2011 e23255
28. D. Martin, S. Aubourg, M. Schouwey, L. Daviet, M. Schalk, and O. Toub Functional annotation, genome organization and phylogeny of the grapevine (Vitis vinifera) terpene synthase gene family based on genome assembly, FLcDNA cloning, and enzyme assays BMC Plant Biology 10 2010 226
29. D. Nagegowda, M. Gutensohn, C. Wilkerson, and N. Dudareva Two nearly identical terpene synthases catalyze the formation of nerolidol and linalool in snapdragon flowers The Plant Journal 55 2008 224 239
30. N.J. Nieuwenhuizen, M.Y. Wang, A.J. Matich, S.A. Green, X. Chen, and Y.-K. Yauk Two terpene synthases are responsible for the major sesquiterpenes emitted from the flowers of kiwifruit (Actinidia deliciosa) Journal of Experimental Botany 60 2009 3203 3219
31. P. O'Maille, J. Chappell, and J. Noel A single-vial analytical and quantitative gas chromatography-mass spectrometry assay for terpene synthases Analytical Biochemistry 335 2004 210 217 (Pubitemid 39535185)
32. M. Pfalz, M.D. Mikkelsen, P. Bednarek, C.E. Olsen, B.A. Halkier, and J. Kroymann Metabolic engineering in Nicotiana benthamiana reveals key enzyme functions in Arabidopsis indole glucosinolate modification The Plant Cell Online 23 2011 716 729
33. D. Silhavy, A. Molnar, A. Lucioli, G. Szittya, C. Hornyik, and M. Tavazza A viral protein suppresses RNA silencing and binds silencing-generated, 21- to 25-nucleotide double-stranded RNAs The EMBO Journal 21 2002 3070 3080 (Pubitemid 34670391)
34. E.J.F. Souleyre, D.R. Greenwood, E.N. Friel, S. Karunairetnam, and R.D. Newcomb An alcohol acyl transferase from apple (cv. Royal Gala), MpAAT1, produces esters involved in apple fruit flavor The FEBS Journal 272 2005 3132 3144 (Pubitemid 40904699)
35. E.J.F. Souleyre, C.S. Günther, M.Y. Wang, R.D. Newcomb, and K.B. Marsh Ester biosynthesis in kiwifruit - From enzymes to pathways Acta Horticulturae (ISHS) 913 2011 205 211
36. S. Taketa, T. Yuo, T. Tonooka, Y. Tsumuraya, Y. Inagaki, and N. Haruyama Functional characterization of barley betaglucanless mutants demonstrates a unique role for CslF6 in (1,3;1,4)-β-D-glucan biosynthesis Journal of Experimental Botany 63 2012 381 392
37. S.K. Tanz, and I. Small In silico methods for identifying organellar and suborganellar targeting peptides in Arabidopsis chloroplast proteins and for predicting the topology of membrane proteins R.P. Jarvis, Chloroplast research in Arabidopsis Vol. 774 2011 Humana Press New York 243 280
38. N. van Deenen, A.-L. Bachmann, T. Schmidt, H. Schaller, J. Sand, and D. Prüfer Molecular cloning of mevalonate pathway genes from Taraxacum brevicorniculatum and functional characterisation of the key enzyme 3-hydroxy-3-methylglutaryl-coenzyme A reductase Molecular Biology Reports 39 2012 4337 4349
39. G. Vialart, A. Hehn, A. Olry, K. Ito, C. Krieger, and R. Larbat A 2-oxoglutarate-dependent dioxygenase from Ruta graveolens L. exhibits p-coumaroyl coA 2′-hydroxylase activity (C2'H): A missing step in the synthesis of umbelliferone in plants The Plant Journal 70 2012 460 470
40. O. Voinnet, S. Rivas, P. Mestre, and D. Baulcombe An enhanced transient expression system in plants based on suppression of gene silencing by the p19 protein of tomato bushy stunt virus The Plant Journal 33 2003 949 956 (Pubitemid 36339384)
41. D.C. Williams, D.J. McGarvey, E.J. Katahira, and R. Croteau Truncation of limonene synthase preprotein provides a fully active 'pseudomature' form of this monoterpene cyclase and reveals the function of the amino-terminal arginine pair Biochemistry 37 1998 12213 12220 (Pubitemid 28411307)
42. R. Xu, and Q. Li Protocol: Streamline cloning of genes into binary vectors in Agrobacterium via the Gateway(R) TOPO vector system Plant Methods 4 2008 4
43. Y. Yang, R. Li, and M. Qi In vivo analysis of plant promoters and transcription factors by agroinfiltration of tobacco leaves The Plant Journal 22 2000 543 551 (Pubitemid 30427763)
44. B. Zhang, K. Chen, J. Bowen, A. Allan, R. Espley, and S. Karunairetnam Differential expression within the LOX gene family in ripening kiwifruit Journal of Experimental Botany 57 2006 3825 3836 (Pubitemid 44863277)
45. J. Zupan, T.R. Muth, O. Draper, and P. Zambryski The transfer of DNA from Agrobacterium tumefaciens into plants: A feast of fundamental insights The Plant Journal 23 2000 11 28 (Pubitemid 30597778)