메뉴 건너뛰기




Volumn 7, Issue 9, 2012, Pages

Dynamical Behaviors of Rb-E2F Pathway Including Negative Feedback Loops Involving miR449

Author keywords

[No Author keywords available]

Indexed keywords

MICRORNA; MICRORNA 449; TRANSCRIPTION FACTOR E2F; UNCLASSIFIED DRUG;

EID: 84866485589     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0043908     Document Type: Article
Times cited : (28)

References (48)
  • 1
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: Genomics, Biogenesis, Mechanism, and Function
    • Bartel DP, (2004) MicroRNAs: Genomics, Biogenesis, Mechanism, and Function. Cell 116: 281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 2
    • 79952754267 scopus 로고    scopus 로고
    • Bistability and oscillations in gene regulation mediated by small noncoding RNAs
    • Liu DY, Chang X, Liu ZR, Chen LN, Wang RQ, (2011) Bistability and oscillations in gene regulation mediated by small noncoding RNAs. PloS ONE 6 (3):: e17029.
    • (2011) PloS ONE , vol.6 , Issue.3
    • Liu, D.Y.1    Chang, X.2    Liu, Z.R.3    Chen, L.N.4    Wang, R.Q.5
  • 4
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • Lewis BP, Burge CB, Bartel DP, (2005) Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 120: 15-20.
    • (2005) Cell , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 7
    • 60149095444 scopus 로고    scopus 로고
    • Most mammalian mRNAs are conserved targets of microRNAs
    • Friedman RC, Farh KK, Burge CB, Bartel DP, (2009) Most mammalian mRNAs are conserved targets of microRNAs. Genome Res 19: 92-105.
    • (2009) Genome Res , vol.19 , pp. 92-105
    • Friedman, R.C.1    Farh, K.K.2    Burge, C.B.3    Bartel, D.P.4
  • 8
    • 78650175689 scopus 로고    scopus 로고
    • Predicting miRNA's target from primary structure by the nearest neighbor algorithm
    • Lin K, Qian Z, Lu L, Lai L, Gu J, et al. (2009) Predicting miRNA's target from primary structure by the nearest neighbor algorithm. Mol Divers 14: 719-729.
    • (2009) Mol Divers , vol.14 , pp. 719-729
    • Lin, K.1    Qian, Z.2    Lu, L.3    Lai, L.4    Gu, J.5
  • 10
    • 55249115975 scopus 로고    scopus 로고
    • Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals
    • Grimson A, Srivastava M, Fahey V, Woodcroft BJ, Chiang HR, et al. (2008) Early origins and evolution of microRNAs and Piwi-interacting RNAs in animals. Nature 455: 1193-1197.
    • (2008) Nature , vol.455 , pp. 1193-1197
    • Grimson, A.1    Srivastava, M.2    Fahey, V.3    Woodcroft, B.J.4    Chiang, H.R.5
  • 11
    • 40749111551 scopus 로고    scopus 로고
    • A skin microRNA promotes differentiation by repressing 'stemness
    • Yi R, Poy MN, Stoffel M, Fuchs E, (2008) A skin microRNA promotes differentiation by repressing 'stemness'. Nature 452: 225-229.
    • (2008) Nature , vol.452 , pp. 225-229
    • Yi, R.1    Poy, M.N.2    Stoffel, M.3    Fuchs, E.4
  • 12
    • 77950871771 scopus 로고    scopus 로고
    • MicroRNA-1 and -499 regulate differentiation and proliferation in human-derived cardiomyocyte progenitor cells
    • Sluijter JPG, Mil AV, Vliet PV, Metz CHG, Liu J, et al. (2010) MicroRNA-1 and-499 regulate differentiation and proliferation in human-derived cardiomyocyte progenitor cells. Arterioscler Thromb Vasc Biol 30: 859-868.
    • (2010) Arterioscler Thromb Vasc Biol , vol.30 , pp. 859-868
    • Sluijter, J.P.G.1    Mil, A.V.2    Vliet, P.V.3    Metz, C.H.G.4    Liu, J.5
  • 14
    • 29244437868 scopus 로고    scopus 로고
    • A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye
    • Li X, Carthew RW, (2005) A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye. Cell 123: 1267-1277.
    • (2005) Cell , vol.123 , pp. 1267-1277
    • Li, X.1    Carthew, R.W.2
  • 16
    • 58349119585 scopus 로고    scopus 로고
    • MicroRNA silencing in primates: towards development of novel therapeutics
    • Petri A, Lindow M, Kauppinen S, (2009) MicroRNA silencing in primates: towards development of novel therapeutics. Cancer Res 69: 393-395.
    • (2009) Cancer Res , vol.69 , pp. 393-395
    • Petri, A.1    Lindow, M.2    Kauppinen, S.3
  • 17
    • 34249819336 scopus 로고    scopus 로고
    • MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals
    • Tsang J, Zhu J, Oudenaarden A, (2007) MicroRNA-mediated feedback and feedforward loops are recurrent network motifs in mammals. Mol Cell 26: 753-767.
    • (2007) Mol Cell , vol.26 , pp. 753-767
    • Tsang, J.1    Zhu, J.2    Oudenaarden, A.3
  • 18
    • 33751118533 scopus 로고    scopus 로고
    • MicroRNA-9a ensures the precise specification of sensory organ precursors in Drosophila
    • Li Y, Wang F, Lee JA, Gao FB, (2006) MicroRNA-9a ensures the precise specification of sensory organ precursors in Drosophila. Genes Dev 20: 2793-2805.
    • (2006) Genes Dev , vol.20 , pp. 2793-2805
    • Li, Y.1    Wang, F.2    Lee, J.A.3    Gao, F.B.4
  • 19
    • 33751073710 scopus 로고    scopus 로고
    • Denoising feedback loops by thresholding-a new role for microRNAs
    • Cohen SM, Brennecke J, Stark A, (2007) Denoising feedback loops by thresholding-a new role for microRNAs. Genes Dev 20: 2769-2772.
    • (2007) Genes Dev , vol.20 , pp. 2769-2772
    • Cohen, S.M.1    Brennecke, J.2    Stark, A.3
  • 20
    • 24144437052 scopus 로고    scopus 로고
    • MicroRNAs acting in a doublenegative feedback loop to control a neuronal cell fate decision
    • Johnston RJ, Chang S, Etchberger JF, Ortiz CO, Hobert O, (2005) MicroRNAs acting in a doublenegative feedback loop to control a neuronal cell fate decision. Proc Natl Acad Sci 102: 12449-12454.
    • (2005) Proc Natl Acad Sci , vol.102 , pp. 12449-12454
    • Johnston, R.J.1    Chang, S.2    Etchberger, J.F.3    Ortiz, C.O.4    Hobert, O.5
  • 21
    • 76749102887 scopus 로고    scopus 로고
    • E2F1-inducible microRNA 449a/b suppresses cell proliferation and promotes apoptosis
    • Lize M, Pilarski S, Dobbelstein M, (2010) E2F1-inducible microRNA 449a/b suppresses cell proliferation and promotes apoptosis. Cell Death Differ 17: 452-458.
    • (2010) Cell Death Differ , vol.17 , pp. 452-458
    • Lize, M.1    Pilarski, S.2    Dobbelstein, M.3
  • 22
    • 79952706449 scopus 로고    scopus 로고
    • MiR-449 inhibits cell proliferation and is down-regulated in gastric cancer
    • Kheir TB, Futoma-Kazmierczak E, Krogh A, Bardram L, (2011) MiR-449 inhibits cell proliferation and is down-regulated in gastric cancer. Molecular Cancer 10: 1-12.
    • (2011) Molecular Cancer , vol.10 , pp. 1-12
    • Kheir, T.B.1    Futoma-Kazmierczak, E.2    Krogh, A.3    Bardram, L.4
  • 23
    • 79957895825 scopus 로고    scopus 로고
    • Control of vertebrate multiciliogenesis by miR-449 through direct repression of the Delta/Notch pathway
    • Marcet B, Chevalier B, Luxardi G, Curaux C, Zaragosi LE, et al. (2011) Control of vertebrate multiciliogenesis by miR-449 through direct repression of the Delta/Notch pathway. Nat Cell Biol 6: 693-699.
    • (2011) Nat Cell Biol , vol.6 , pp. 693-699
    • Marcet, B.1    Chevalier, B.2    Luxardi, G.3    Curaux, C.4    Zaragosi, L.E.5
  • 24
    • 83455221243 scopus 로고    scopus 로고
    • MicroRNA-449a Overexpression, Reduced NOTCH1 Signals and Scarce Goblet Cells Characterize the Small Intestine of Celiac Patients
    • Capuano M, Iaffaldano L, Tinto N, Montanaro D, Capobianco V, et al. (2011) MicroRNA-449a Overexpression, Reduced NOTCH1 Signals and Scarce Goblet Cells Characterize the Small Intestine of Celiac Patients. PloS One 6: e29094.
    • (2011) PloS One , vol.6
    • Capuano, M.1    Iaffaldano, L.2    Tinto, N.3    Montanaro, D.4    Capobianco, V.5
  • 25
    • 43149108161 scopus 로고    scopus 로고
    • A bistable Rb-E2F switch underlies the restriction point
    • Yao G, Lee TJ, Mori S, Nevins JR, You L, (2008) A bistable Rb-E2F switch underlies the restriction point. Nat Cell Biol 10: 476-482.
    • (2008) Nat Cell Biol , vol.10 , pp. 476-482
    • Yao, G.1    Lee, T.J.2    Mori, S.3    Nevins, J.R.4    You, L.5
  • 26
    • 70350111289 scopus 로고    scopus 로고
    • miR-449a and miR-449b are direct transcriptional targets of E2F1 and negatively regulate pRb-E2F1 activity through a feedback loop by targeting CDK6 and CDC25A
    • Yang X, Feng M, Jiang X, Wu Z, Li Z, et al. (2009) miR-449a and miR-449b are direct transcriptional targets of E2F1 and negatively regulate pRb-E2F1 activity through a feedback loop by targeting CDK6 and CDC25A. Genes Dev 23: 2388-2393.
    • (2009) Genes Dev , vol.23 , pp. 2388-2393
    • Yang, X.1    Feng, M.2    Jiang, X.3    Wu, Z.4    Li, Z.5
  • 27
    • 44849128902 scopus 로고    scopus 로고
    • Two Independent Positive Feedbacks and Bistability in the Bcl-2 Apoptotic Switch
    • Cui J, Chen C, Lu H, Sun T, Shen P, (2008) Two Independent Positive Feedbacks and Bistability in the Bcl-2 Apoptotic Switch. PLoS ONE 3 (1):: e1469.
    • (2008) PLoS ONE , vol.3 , Issue.1
    • Cui, J.1    Chen, C.2    Lu, H.3    Sun, T.4    Shen, P.5
  • 28
    • 50249163201 scopus 로고    scopus 로고
    • A Bistable Gene Switch for Antibiotic Biosynthesis: The Butyrolactone Regulon in Streptomyces coelicolor
    • Mehra S, Charaniya S, Takano E, Hu WS, (2008) A Bistable Gene Switch for Antibiotic Biosynthesis: The Butyrolactone Regulon in Streptomyces coelicolor. PLoS ONE 3 (7):: e2724.
    • (2008) PLoS ONE , vol.3 , Issue.7
    • Mehra, S.1    Charaniya, S.2    Takano, E.3    Hu, W.S.4
  • 29
    • 54249117585 scopus 로고    scopus 로고
    • Adaptive Response of a Gene Network to Environmental Changes by Fitness-Induced Attractor Selection
    • Kashiwagi A, Urabe I, Kaneko K, Yomo T, (2006) Adaptive Response of a Gene Network to Environmental Changes by Fitness-Induced Attractor Selection. PLoS ONE 1 (1):: e49.
    • (2006) PLoS ONE , vol.1 , Issue.1
    • Kashiwagi, A.1    Urabe, I.2    Kaneko, K.3    Yomo, T.4
  • 30
  • 31
    • 84887212582 scopus 로고    scopus 로고
    • Oscillations of the p53-Akt Network: Implications on Cell Survival and Death
    • Wee KB, Surana U, Aguda BD, (2009) Oscillations of the p53-Akt Network: Implications on Cell Survival and Death. PLoS ONE 4 (2):: e4407.
    • (2009) PLoS ONE , vol.4 , Issue.2
    • Wee, K.B.1    Surana, U.2    Aguda, B.D.3
  • 32
    • 58049211960 scopus 로고    scopus 로고
    • Cholinergic Neuromodulation Changes Phase Response Curve Shape and Type in Cortical Pyramidal Neurons
    • Stiefel KM, Gutkin BS, Sejnowski TJ, (2008) Cholinergic Neuromodulation Changes Phase Response Curve Shape and Type in Cortical Pyramidal Neurons. PLoS ONE 3 (12):: e3947.
    • (2008) PLoS ONE , vol.3 , Issue.12
    • Stiefel, K.M.1    Gutkin, B.S.2    Sejnowski, T.J.3
  • 33
    • 0037023755 scopus 로고    scopus 로고
    • Signaling networks that link cell proliferation and cell fate
    • Sears RC, Nevins JR, (2002) Signaling networks that link cell proliferation and cell fate. J Biol Chem 277: 11617-11620.
    • (2002) J Biol Chem , vol.277 , pp. 11617-11620
    • Sears, R.C.1    Nevins, J.R.2
  • 34
    • 2942722811 scopus 로고    scopus 로고
    • Molecular mechanisms of E2F-dependent activation and pRBmediated repression
    • Frolov MV, Dyson NJ, (2004) Molecular mechanisms of E2F-dependent activation and pRBmediated repression. J Cell Sci 117: 2173-2181.
    • (2004) J Cell Sci , vol.117 , pp. 2173-2181
    • Frolov, M.V.1    Dyson, N.J.2
  • 35
    • 11244276992 scopus 로고    scopus 로고
    • The E2F family: specific functions and overlapping interests
    • Attwooll C, Lazzerini Denchi E, Helin K, (2004) The E2F family: specific functions and overlapping interests. EMBO J 23: 4709-4716.
    • (2004) EMBO J , vol.23 , pp. 4709-4716
    • Attwooll, C.1    Lazzerini Denchi, E.2    Helin, K.3
  • 36
    • 0027491775 scopus 로고
    • Expression of transcription factor E2F1 induces quiescent cells to enter S phase
    • Johnson DG, Schwarz JK, Cress WD, Nevins JR, (1993) Expression of transcription factor E2F1 induces quiescent cells to enter S phase. Nature 365: 349-352.
    • (1993) Nature , vol.365 , pp. 349-352
    • Johnson, D.G.1    Schwarz, J.K.2    Cress, W.D.3    Nevins, J.R.4
  • 37
    • 0035936113 scopus 로고    scopus 로고
    • The E2F1-3 transcription factors are essential for cellular proliferation
    • Wu LZ, Timmers C, Maiti B, Saavedra HI, Sang L, et al. (2001) The E2F1-3 transcription factors are essential for cellular proliferation. Nature 414: 457-462.
    • (2001) Nature , vol.414 , pp. 457-462
    • Wu, L.Z.1    Timmers, C.2    Maiti, B.3    Saavedra, H.I.4    Sang, L.5
  • 38
    • 74949104538 scopus 로고    scopus 로고
    • miR-449 regulates CDK-Rb-E2F1 through an auto-regulatory feedback circuit
    • Feng M, Yu Q, (2010) miR-449 regulates CDK-Rb-E2F1 through an auto-regulatory feedback circuit. Cell cycle 9: 213-214.
    • (2010) Cell Cycle , vol.9 , pp. 213-214
    • Feng, M.1    Yu, Q.2
  • 40
    • 54049108094 scopus 로고    scopus 로고
    • Underlying principles of cell fate determination during G1 phase of the mammalian cell cycle
    • Pfeuty B, David Pfeuty T, Kaneko K, (2008) Underlying principles of cell fate determination during G1 phase of the mammalian cell cycle. Cell cycle 7: 1-13.
    • (2008) Cell Cycle , vol.7 , pp. 1-13
    • Pfeuty, B.1    David Pfeuty, T.2    Kaneko, K.3
  • 41
    • 34247627985 scopus 로고    scopus 로고
    • Cell Size at S Phase Initiation: An Emergent Property of the G1/S Network
    • Barberis M, Klipp E, Vanoni M, Alberghina L, (2007) Cell Size at S Phase Initiation: An Emergent Property of the G1/S Network. PLoS Computat Biol 3: 0649-0666.
    • (2007) PLoS Computat Biol , vol.3 , pp. 0649-0666
    • Barberis, M.1    Klipp, E.2    Vanoni, M.3    Alberghina, L.4
  • 43
    • 0742324404 scopus 로고    scopus 로고
    • Life and death decisions by E2F-1
    • Bell LA, Ryan KM, (2004) Life and death decisions by E2F-1. Cell Death Differ 11: 137-142.
    • (2004) Cell Death Differ , vol.11 , pp. 137-142
    • Bell, L.A.1    Ryan, K.M.2
  • 44
    • 54049120956 scopus 로고    scopus 로고
    • E2F-at the crossroads of life and death
    • Polager S, Ginsberg D, (2008) E2F-at the crossroads of life and death. Trends Cell Biol 18: 528-535.
    • (2008) Trends Cell Biol , vol.18 , pp. 528-535
    • Polager, S.1    Ginsberg, D.2
  • 45
    • 0037998134 scopus 로고    scopus 로고
    • The E2F transcription factors: key regulators of cell proliferation
    • Muller H, Helin K, (2000) The E2F transcription factors: key regulators of cell proliferation. Biochimica et Biophysica Acta 1470: M1-M12.
    • (2000) Biochimica Et Biophysica Acta , vol.1470
    • Muller, H.1    Helin, K.2
  • 46
    • 0032834675 scopus 로고    scopus 로고
    • A Model of Cell Cycle Behavior Dominated by Kinetics of a Pathway Stimulated by Growth Factors
    • Obeyesekere M, Zimmerman S, (1999) A Model of Cell Cycle Behavior Dominated by Kinetics of a Pathway Stimulated by Growth Factors. Bulletin of Mathematical Biology 61: 917-934.
    • (1999) Bulletin of Mathematical Biology , vol.61 , pp. 917-934
    • Obeyesekere, M.1    Zimmerman, S.2
  • 47
    • 77957767333 scopus 로고    scopus 로고
    • Coordination between Cell Cycle Progression and Cell Fate Coordination between Cell Cycle Progression and Cell Fate Coordination between Cell Cycle Progression and Cell Fate
    • Zhang XP, Liu F, Wang W, (2010) Coordination between Cell Cycle Progression and Cell Fate Coordination between Cell Cycle Progression and Cell Fate Coordination between Cell Cycle Progression and Cell Fate. J Biol Chem 285 (41):: 31571-31580.
    • (2010) J Biol Chem , vol.285 , Issue.41 , pp. 31571-31580
    • Zhang, X.P.1    Liu, F.2    Wang, W.3
  • 48
    • 58149382580 scopus 로고    scopus 로고
    • MicroRNA re gulation of a cancer network: Consequences of the feedback loops involving miR-17-92, E2F, and Myc
    • Aguda BD, Kim Y, Piper-Hunter MG, Friedman A, Marsh CB, (2008) MicroRNA re gulation of a cancer network: Consequences of the feedback loops involving miR-17-92, E2F, and Myc. Proc Natl Acad Sci 105: 19678-19683.
    • (2008) Proc Natl Acad Sci , vol.105 , pp. 19678-19683
    • Aguda, B.D.1    Kim, Y.2    Piper-Hunter, M.G.3    Friedman, A.4    Marsh, C.B.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.