메뉴 건너뛰기




Volumn 23, Issue 3, 2012, Pages 90-93

Seqtrace: A graphical tool for rapidly processing DNA sequencing chromatograms

Author keywords

Bioinformatics; Sequence analysis; Software

Indexed keywords

DNA;

EID: 84866482104     PISSN: 15240215     EISSN: 19434731     Source Type: Journal    
DOI: 10.7171/jbt.12-2303-004     Document Type: Article
Times cited : (234)

References (17)
  • 4
    • 77952734936 scopus 로고    scopus 로고
    • High-throughput DNA sequencing-concepts and limitations
    • Kircher M, Kelso J. High-throughput DNA sequencing-concepts and limitations. BioEssays 2010;32:524-536.
    • (2010) BioEssays , vol.32 , pp. 524-536
    • Kircher, M.1    Kelso, J.2
  • 5
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • Needleman SB, Wunsch CD. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J Mol Biol 1970;48:443-453.
    • (1970) J Mol Biol , vol.48 , pp. 443-453
    • Needleman, S.B.1    Wunsch, C.D.2
  • 6
    • 0015252494 scopus 로고
    • Matching sequences under deletion/insertion constraints
    • Sankoff D. Matching sequences under deletion/insertion constraints. Proc Natl Acad Sci USA 1972;69:4-6.
    • (1972) Proc Natl Acad Sci USA , vol.69 , pp. 4-6
    • Sankoff, D.1
  • 7
    • 0031978181 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using Phred. II. Error probabilities
    • Ewing B, Green P. Base-calling of automated sequencer traces using Phred. II. Error probabilities. Genome Res 1998;8:186-194.
    • (1998) Genome Res , vol.8 , pp. 186-194
    • Ewing, B.1    Green, P.2
  • 10
    • 0027014799 scopus 로고
    • A standard file format for data from DNA sequencing instruments
    • Dear S, Staden R. A standard file format for data from DNA sequencing instruments. DNA Seq 1992;3:107-110.
    • (1992) DNA Seq , vol.3 , pp. 107-110
    • Dear, S.1    Staden, R.2
  • 11
    • 0036166478 scopus 로고    scopus 로고
    • ZTR: A new format for DNA sequence trace data
    • Bonfield JK, Staden R. ZTR: a new format for DNA sequence trace data. Bioinformatics 2002;18:3-10.
    • (2002) Bioinformatics , vol.18 , pp. 3-10
    • Bonfield, J.K.1    Staden, R.2
  • 12
    • 0031350056 scopus 로고    scopus 로고
    • NEXUS: An extensible file format for systematic information
    • Maddison DR, Swofford DL, Maddison WP. NEXUS: an extensible file format for systematic information. Syst Biol 1997; 46:590-621.
    • (1997) Syst Biol , vol.46 , pp. 590-621
    • Maddison, D.R.1    Swofford, D.L.2    Maddison, W.P.3
  • 13
    • 77954506029 scopus 로고    scopus 로고
    • Gap5-editing the billion fragment sequence assembly
    • Bonfield JK, Whitwham A. Gap5-editing the billion fragment sequence assembly. Bioinformatics 2010;26:1699-1703.
    • (2010) Bioinformatics , vol.26 , pp. 1699-1703
    • Bonfield, J.K.1    Whitwham, A.2
  • 14
    • 0026410581 scopus 로고
    • A trace display and editing program for data from fluorescence based sequencing machines
    • Gleeson T, Hillier L. A trace display and editing program for data from fluorescence based sequencing machines. Nucleic Acids Res 1991;19:6481-6483.
    • (1991) Nucleic Acids Res , vol.19 , pp. 6481-6483
    • Gleeson, T.1    Hillier, L.2
  • 16
    • 84866479975 scopus 로고    scopus 로고
    • ChroView: A trace viewer for browsing and editing chromatogram files
    • Tae H, Kong E-B, Park K. ChroView: a trace viewer for browsing and editing chromatogram files. Genomics Inform 2007;5:30-31.
    • (2007) Genomics Inform , vol.5 , pp. 30-31
    • Tae, H.1    Kong, E.-B.2    Park, K.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.