Structure and sensitivity analysis of individual-based predator-prey models

Reliability Engineering and System Safety

Volumn 107, Issue , 2012, Pages 71-81

  Imron, Muhammad Ali ^a,b   Gergs, Andre ^c   Berger, Uta ^b  

^a GADJAH MADA UNIVERSITY   (Indonesia)

^b DRESDEN UNIVERSITY OF TECHNOLOGY   (Germany)

^c RWTH AACHEN UNIVERSITY   (Germany)

Author keywords

Conservation; Ecology; Individual based model; Notonecta; Panthera; Population dynamics; Screening design sensitivity analysis

Indexed keywords

COMPUTATIONAL COSTS; CONCEPTUAL UNDERSTANDING; FORAGING MODEL; GAIN INSIGHT; INDIVIDUAL-BASED; INDIVIDUAL-BASED MODELS; MORRIS METHOD; NOTONECTA; PANTHERA; PREDATOR - PREY SYSTEM; PREDATOR-PREY INTERACTION; PREDATOR-PREY MODELS; RATE PARAMETERS; SCREENING DESIGN;

CONSERVATION; ECOLOGY; INTERNET PROTOCOLS; MODEL STRUCTURES; POPULATION DYNAMICS; PREDATOR PREY SYSTEMS;

SENSITIVITY ANALYSIS;

EID: 84866342098     PISSN: 09518320     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ress.2011.07.005     Document Type: Conference Paper

References (50)

1. R.A. Hinrichsen Population viability analysis for several populations using multivariate state-space models Ecological Modelling 220 2009 1197 1202
2. L. Real Kinetics of functional response American Naturalist 111 1977 289 300
3. J. Jeschke, M. Koop, and R. Tollrian Predator functional responses: discriminating between handling and digesting prey Ecological Monographs 72 2002 95 112
4. V. Grimm Ten years of individual-based modeling in ecology: what have we learned and what could we learn in the future? Ecological Modeling 115 1999 129 148
5. D.L. DeAngelis, and W.M. Mooij Individual-based modelling of ecological and evolutionary process Annual Review of Ecology and Systematics 36 2005 147 168 10.1146/annurev.ecolsys.36.102003.152644
6. V. Grimm, U. Berger, F. Bastiansen, S. Eliassen, V. Ginot, and J. Giske A standard protocol for describing individual-based and agent-based models Ecological Modelling 198 2006 115 126
7. T. Preuss, M. Hammers-Wirtz, U. Hommen, M. Rubach, and H. Ratte Development and validation of an individual-based Daphnia magna population model: the influence of crowding on population dynamics Ecological Modelling 220 2009 310 329
8. M. Wang, and V. Grimm Home range dynamics and population regulation: an individual-based model of the common shrew sorex araneus Ecological Modelling 205 2007 397 409
9. S. Kramer-Schadt, E. Revilla, T. Wiegand, and U. Breitenmoser Fragmented landscapes, road mortality and patch connectivity: modeling influences on the dispersal of eurasian lynx Journal of Applied Ecology 41 2004 711 723
10. S.C. Ahearn, J.L.D. Smith, A.R. Joshi, and J. Ding TIGMOD: an individual-based spatially explicit model for simulating tiger/human interaction in multiple use forests Ecological Modelling 140 2001 81 97
11. P.C. Cramer, and K.M. Portier Modeling Florida panther movements in response to human attributes of the landscape and ecological settings Ecological Modelling 140 2001 51 80
12. J. Cariboni, D. Gatelli, R. Riska, and A. Satelli The role of sensitivity analysis in ecological modelling Ecological Modelling 203 2007 167 182
13. A. Saltelli, M. Ratto, and F.C. Stefano Tarantola Sensitivity analysis practices: strategies for model-based inference Reliability Engineering and System Safety 91 2006 1109 1125
14. U.K. Karanth, and B.M. Stith Prey depletion as critical determinant of tiger population viability J. Seindensticker, S. Christie, P. Jackson, Riding the tiger: tiger conservation in human dominated landscapes 1999 Cambridge University Press 100 113
15. P.A. Nilsson Predator behaviour and prey density: evaluating density-dependent intraspecific interaction on predator functional responses Animal Ecology 70 2001 14 19
16. M.A. MacCarthy, M.A. Burgman, and S. Ferson Sensitivity analysis for models of population viability Biological Conservation 73 1995 93 100
17. M.D. Morris Factorial sampling plans for preliminary computational experiments Technometrics 33 1991 161 174
18. Imron.MA. An individual-based model approach for the conservation of the Sumatran Tiger Panthera tigris sumatrae population in Central Sumatra. PhD thesis, TU Dresden, Germany; 2011. pp. 200.
19. A. Gergs, and H.T. Ratte Predicting functional response and size selectivity of juvenile Notonecta maculata foraging on Daphnia magna Ecological Modelling 220 2009 3331 3341
20. A. Gergs, N.I. Hoeltzenbein, and H.T. Ratte Diurnal and nocturnal functional response of juvenile Notonecta maculata considered as a consequence of shifting predation behaviour Behavioural Process 85 2010 151 156
21. R.M. Cook, and B.J. Cockrell Predator ingestion rate and its bearing on feeding time and theory of optimal diets Journal of Animal Ecology 47 1978 529 547
22. P.S. Giller, and S. Mcneill Predation strategies, resource partitioning and habitat selection in Notonecta (Hemiptera, Heteroptera) Journal of Animal Ecology 50 1981 789 808
23. M.A. Scott, and W.W. Murdoch Selective predation by the backswimmer, Notonecta Limnology and Oceanography 28 1983 352 366
24. J. Gerritsen, and J. Strickler Encounter probabilities and community structure in zooplankton - mathematical model Journal of Fisheries Research Board of Canada 34 1977 73 82
25. A. Saltelli, S. Tarantola, F. Campolongo, and M. Ratto Sensitivity analysis in practices a guide to assessing scientific models 2004 John Wiley and Sons Sussex England
26. F. Campolongo, J. Cariboni, and A. Saltelli An effective screening design for sensitivity analysis of large models Environmental Modelling and Software 22 2007 1509 1518
27. SIMLAB, Simlab version 2.2, free software for uncertainty and sensitivity analysis, 〈http://simlab.jrc.ec.europa.eu〉, 2010. Joint Research Centre of the European Commission. Downloaded in May 2010.
28. M. Sunquist, K.U. Karanth, and F. Sunquist Ecology, behaviour and resilience of the tiger and its conservation needs J. Seindensticker, S. Christie, P. Jackson, Riding the tiger: tiger conservation in human dominated landscapes 1999 Cambridge University Press 5 18
29. T.G. O'Brien, M.F. Kinnaird, and H.T. Wibisono Crouching tigers, hidden prey: Sumatran tiger and prey populations in a tropical forest landscape Animal Conservation 6 2003 131 139
30. N. Franklin, Bastoni, Sriyanto, D. Siswomartono, J. Manangsang, and R. Tilson Last of the Indonesian tigers: a cause for optimism J. Seindensticker, S. Christie, P. Jackson, Riding the tiger: tiger conservation in human dominated landscapes 1999 Cambridge University Press 130 147
31. M. Sunquist What is a tiger? ecology and behavior R. Tilson, P.J. Nyhus, Tigers of the world the science, politics and conservation of Panthera tigris 2nd ed. 2010 Academic Press 32 Jamestown Road, London NW1 7BY, UK 16 34
32. M.E. Sunquist The social organization of tigers (Phantera tigris) in Royal Chitawan National Park, Nepal, Smitsonian contribution to zoology 336 ed. 1981 Smitsonian Institution Press Washington
33. K.W. Thornton, A.S. Lessem, D.E. Ford, and C.A. Stirgus Improving ecological simulation through sensitivity analysis Simulation 32 1979 10.1177/003754977903200503
34. J.W. Hayes, J.D. Stark, and K.A. Shearer Development and test of a whole-lifetime foraging and bioenergetic growth model for drift-feeding brown trout The American Fisheries Society 129 2000 315 332
35. D. Miquelle, E.N. Smirnov, T.W. Merril, A.E. Myslenkov, H.B. Quigley, and M.G. Hornocker Hierarhical spatial analysis of amur tiger relationships to habitat and prey S. Christie, J. Seindensticker, P Jackson, Riding the tiger: tiger conservation in human dominated landscapes 1999 Cambridge University Press 71 99
36. U. Ramakrishnan, R.G. Coss, and N.W. Pelkey Tiger decline caused by reduction of large ungulate prey: evidence from a study of leopard diets in southern India Biological Conservation 89 1999 113 120
37. U.K. Karanth, J.D. Nichols, N.S. Kumar, W.A. Link, and J.E. Hines Tiger and their prey: predicting carnivore densities from prey abundance PNAS 2004 4854 4858
38. C. Cosner, D.L. DeAngelis, J.S. Ault, and D.B. Olson Effect of spatial grouping on the functional response of predators Theorical Population Biology 56 1999 65 75
39. W. Wang, Y. Takeuchi, Y. Saito, and S. Nakaoka Predator system with parental care for predators Theorical Biology 241 2006 451 458
40. Y. Takahara Individual base model of predator-prey shows predator dominant dynamics BioSystems 57 2000 173 185
41. B.H. McArdle, and J.H. Lawton Effects of prey size and predator instar on the predation of daphnia by notonecta Ecological Entomology 4 1979 267 275
42. C. Holling The principles of insect predation Annual Review of Entomology 6 1961 163 182
43. K. Hohberg, and W. Traunspurger Foraging theory and partial consumption in a tardigrade-nematode system Behavioral Ecology 20 2009 884 890
44. G. Pe'er, and S. Kramer-Schadt Incorporating the perceptual range of animals into connectivity models Ecological Model 213 2008 73 85
45. L. Berec Mixed encounters, limited persception and optimal foraging Bulletin of Mathematical Biology 62 2000 849 868 10.1006/bulm.2000.0179
46. W. Jetz, C. Carbone, J. Fulford, and J.H. Brown Scaling of animal space use Science 2004 266 268
47. S. Kooijman Dynamic energy and mass budgets in biological systems 2000 Cambridge University Press Great Britain 0-521-78608-8
48. U. Wilensky NetLogo 1rc3 edition 1999 Center for Connected Learning and Computer-Based Modeling, Northwestern University Evanston, IL., netlogo 4
49. H.S. Reddy, C. Srinivasulu, and K.T. Rao Prey selection by Indian tiger (Panthera tigris tigris) in Nagarjunasagar Srisailam tiger reserve, India Mammalian Biology 69 2004 384 391
50. J.M. Fryxell, M. Hazell, L. Brger, B.D. Dalziel, D.T. Haydon, and J.M. Morales Multiple movement modes by large herbivores at multiple spatiotemporal scales PNAS 105 2008 19114 19119 〈www.pnas.org/cgi/doi/10.1073/pnas. 0801737105〉