Retrograde signaling in plants: From simple to complex scenarios

Frontiers in Plant Science

Volumn 3, Issue JUN, 2012, Pages

  Leister, Dario ^a  

^a UNIVERSITY OF MUNICH   (Germany)

Author keywords

Nuclear gene expression; Plastid signaling; Retrograde signaling; Signal integration

Indexed keywords

EID: 84866160686     PISSN: None     EISSN: 1664462X     Source Type: Journal    
DOI: 10.3389/fpls.2012.00135     Document Type: Article

References (48)

1. Apel, K., and Hirt, H. (2004). Reactive oxygen species: metabolism, oxidative stress, and signal transduction. Annu. Rev. Plant Biol. 55, 373-399.
2. Baier, M., and Dietz, K. J. (2005). Chloroplasts as source and target of cellular redox regulation: a discussion on chloroplast redox signals in the context of plant physiology. J. Exp. Bot. 56, 1449-1462.
3. Beck, C. F. (2005). Signaling pathways from the chloroplast to the nucleus. Planta 222, 743-756.
4. Biehl, A., Richly, E., Noutsos, C., Salamini, F., and Leister, D. (2005). Analysis of 101 nuclear transcriptomes reveals 23 distinct regulons and their relationship to metabolism, chromosomal gene distribution and co-ordination of nuclear and plastid gene expression. Gene 344, 33-41.
5. Bradbeer, J. W., Atkinson, Y. E., Börner, T., and Hagemann, R. (1979). Cytoplasmic synthesis of plastid polypeptides may be controlled by plastid-synthesized RNA. Nature 279, 816-817.
6. Bräutigam, K., Dietzel, L., Kleine, T., Ströher, E., Wormuth, D., Dietz, K. J., Radke, D., Wirtz, M., Hell, R., Dörmann, P., Nunes-Nesi, A., Schauer, N., Fernie, A. R., Oliver, S. N., Geigenberger, P., Leister, D., and Pfannschmidt, T. (2009). Dynamic plastid redox signals integrate gene expression and metabolism to induce distinct metabolic states in photosynthetic acclimation in Arabidopsis. Plant Cell 21, 2715-2732.
7. Chan, K. X., Crisp, P. A., Estavillo, G. M., and Pogson, B. J. (2010). Chloroplast-to-nucleus communication: current knowledge, experimental strategies and relationship to drought stress signaling. Plant Signal. Behav. 5, 1575-1582.
8. Dietz, K. J., Vogel, M. O., and Viehhauser, A. (2010). AP2/EREBP transcription factors are part of gene regulatory networks and integrate metabolic, hormonal and environmental signals in stress acclimation and retrograde signalling. Protoplasma 245, 3-14.
9. Estavillo, G. M., Crisp, P. A., Pornsiriwong, W., Wirtz, M., Collinge, D., Carrie, C., Giraud, E., Whelan, J., David, P., Javot, H., Brearley, C., Hell, R., Marin, E., and Pogson, B. J. (2011). Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis. Plant Cell 23, 3992-4012.
10. Fischer, B. B., Krieger-Liszkay, A., Hideg, E., Snyrychova, I., Wiesendanger, M., and Eggen, R. I. (2007). Role of singlet oxygen in chloroplast to nucleus retrograde signaling in Chlamydomonas reinhardtii. FEBS Lett. 581, 5555-5560.
11. Gray, J. C., Hansen, M. R., Shaw, D. J., Graham, K., Dale, R., Smallman, P., Natesan, S. K., and Newell, C. A. (2012). Plastid stromules are induced by stress treatments acting through abscisic acid. Plant J. 69, 387-398.
12. Gray, J. C., Sullivan, J. A., Wang, J. H., Jerome, C. A., and Maclean, D. (2003). Coordination of plastid and nuclear gene expression. Philos. Trans. R. Soc. Lond. B Biol. Sci. 358, 135-144; discussion 144-135.
13. Hanson, M. R., and Sattarzadeh, A. (2008). Dynamic morphology of plastids and stromules in angiosperm plants. Plant Cell Environ. 31, 646-657.
14. Heiber, I., Ströher, E., Raatz, B., Busse, I., Kahmann, U., Bevan, M. W., Dietz, K. J., and Baier, M. (2007). The redox imbalanced mutants of Arabidopsis differentiate signaling pathways for redox regulation of chloroplast antioxidant enzymes. Plant Physiol. 143, 1774-1788.
15. Inaba, T., Yazu, F., Ito-Inaba, Y., Kakizaki, T., and Nakayama, K. (2011). Retrograde signaling pathway from plastid to nucleus. Int. Rev. Cell Mol. Biol. 290, 167-204.
16. Isemer, R., Mulisch, M., Schäfer, A., Kirchner, S., Koop, H. U., and Krupinska, K. (2012). Recombinant Whirly1 translocates from transplastomic chloroplasts to the nucleus. FEBS Lett. 586, 85-88.
17. Karpinski, S., Escobar, C., Karpinska, B., Creissen, G., and Mullineaux, P. M. (1997). Photosynthetic electron transport regulates the expression of cytosolic ascorbate peroxidase genes in Arabidopsis during excess light stress. Plant Cell 9, 627-640.
18. Kim, C., Lee, K. P., Baruah, A., Nater, M., Gobel, C., Feussner, I., and Apel, K. (2009). 1O2-mediated retrograde signaling during late embryogenesis predetermines plastid differentiation in seedlings by recruiting abscisic acid. Proc. Natl. Acad. Sci. U.S.A. 106, 9920-9924.
19. Kim, C., Meskauskiene, R., Apel, K., and Laloi, C. (2008). No single way to understand singlet oxygen signalling in plants. EMBO Rep. 9, 435-439.
20. Kleine, T., Voigt, C., and Leister, D. (2009a). Plastid signalling to the nucleus: messengers still lost in the mists?Trends Genet. 25, 185-192.
21. Kleine, T., Maier, U. G., and Leister, D. (2009b). DNA transfer from organelles to the nucleus: the idiosyncratic genetics of endosymbiosis. Annu. Rev. Plant Biol. 60, 115-138.
22. Koussevitzky, S., Nott, A., Mockler, T. C., Hong, F., Sachetto-Martins, G., Surpin, M., Lim, J., Mittler, R., and Chory, J. (2007). Signals from chloroplasts converge to regulate nuclear gene expression. Science 316, 715-719.
23. Leister, D., Wang, X., Haberer, G., Mayer, K. F., and Kleine, T. (2011). Intracompartmental and intercompartmental transcriptional networks coordinate the expression of genes for organellar functions. Plant Physiol. 157, 386-404.
24. Mochizuki, N., Brusslan, J. A., Larkin, R., Nagatani, A., and Chory, J. (2001). Arabidopsis genomes uncoupled 5 (GUN5) mutant reveals the involvement of Mg-chelatase H subunit in plastid-to-nucleus signal transduction. Proc. Natl. Acad. Sci. U.S.A. 98, 2053-2058.
25. Mochizuki, N., Tanaka, R., Grimm, B., Masuda, T., Moulin, M., Smith, A. G., Tanaka, A., and Terry, M. J. (2010). The cell biology of tetrapyrroles: a life and death struggle. Trends Plant Sci. 15, 488-498.
26. Mochizuki, N., Tanaka, R., Tanaka, A., Masuda, T., and Nagatani, A. (2008). The steady-state level of Mg-protoporphyrin IX is not a determinant of plastid-to-nucleus signaling in Arabidopsis. Proc. Natl. Acad. Sci. U.S.A.105, 15184-15189.
27. Møller, I. M., and Sweetlove, L. J. (2010). ROS signalling-specificity is required. Trends Plant Sci. 15, 370-374.
28. Moulin, M., McCormac, A. C., Terry, M. J., and Smith, A. G. (2008). Tetrapyrrole profiling in Arabidopsis seedlings reveals that retrograde plastid nuclear signaling is not due to Mg-protoporphyrin IX accumulation. Proc. Natl. Acad. Sci. U.S.A. 105, 15178-15183.
29. Mubarakshina, M. M., Ivanov, B. N., Naydov, I. A., Hillier, W., Badger, M. R., and Krieger-Liszkay, A. (2010). Production and diffusion of chloroplastic H2O2 and its implication to signalling. J. Exp. Bot. 61, 3577-3587.
30. Nott, A., Jung, H. S., Koussevitzky, S., and Chory, J. (2006). Plastid-to-nucleus retrograde signaling. Annu. Rev. Plant Biol. 57, 739-759.
31. Oelmüller, R., and Mohr, H. (1986). Photooxidative destruction of chloroplasts and its consequences for expression of nuclear genes. Planta 167, 106-113.
32. op den Camp, R. G., Przybyla, D., Ochsenbein, C., Laloi, C., Kim, C., Danon, A., Wagner, D., Hideg, E., Gobel, C., Feussner, I., Nater, M., and Apel, K. (2003). Rapid induction of distinct stress responses after the release of singlet oxygen in Arabidopsis. Plant Cell 15, 2320-2332.
33. Pesaresi, P., Hertle, A., Pribil, M., Kleine, T., Wagner, R., Strissel, H., Ihnatowicz, A., Bonardi, V., Scharfenberg, M., Schneider, A., Pfannschmidt, T., and Leister, D. (2009). Arabidopsis STN7 kinase provides a link between short-and long-term photosynthetic acclimation. Plant Cell 21, 2402-2423.
34. Pesaresi, P., Masiero, S., Eubel, H., Braun, H. P., Bhushan, S., Glaser, E., Salamini, F., and Leister, D. (2006). Nuclear photosynthetic gene expression is synergistically modulated by rates of protein synthesis in chloroplasts and mitochondria. Plant Cell 18, 970-991.
35. Pesaresi, P., Schneider, A., Kleine, T., and Leister, D. (2007). Interorganellar communication. Curr. Opin. Plant Biol. 10, 600-606.
36. Pfannschmidt, T. (2003). Chloroplast redox signals: how photosynthesis controls its own genes. Trends Plant Sci. 8, 33-41.
37. Pfannschmidt, T. (2010). Plastidial retrograde signalling-a true "plastid factor" or just metabolite signatures?Trends Plant Sci. 15, 427-435.
38. Pfannschmidt, T., Schütze, K., Fey, V., Sherameti, I., and Oelmüller, R. (2003). Chloroplast redox control of nuclear gene expression-a new class of plastid signals in interorganellar communication. Antioxid. Redox Signal. 5, 95-101.
39. Pogson, B. J., Woo, N. S., Forster, B., and Small, I. D. (2008). Plastid signalling to the nucleus and beyond. Trends Plant Sci. 13, 602-609.
40. Ramel, F., Birtic, S., Ginies, C., Soubigou-Taconnat, L., Triantaphylides, C., and Havaux, M. (2012). Carotenoid oxidation products are stress signals that mediate gene responses to singlet oxygen in plants. Proc. Natl. Acad. Sci. U.S.A. 109, 5535-5540.
41. Richly, E., Dietzmann, A., Biehl, A., Kurth, J., Laloi, C., Apel, K., Salamini, F., and Leister, D. (2003). Covariations in the nuclear chloroplast transcriptome reveal a regulatory master-switch. EMBO Rep. 4, 491-498.
42. Strand, A., Asami, T., Alonso, J., Ecker, J. R., and Chory, J. (2003). Chloroplast to nucleus communication triggered by accumulation of Mg-protoporphyrinIX. Nature 421, 79-83.
43. Sun, X., Feng, P., Xu, X., Guo, H., Ma, J., Chi, W., Lin, R., Lu, C., and Zhang, L. (2011). A chloroplast envelope-bound PHD transcription factor mediates chloroplast signals to the nucleus. Nat. Commun. 2, 477.
44. Thomas, J., and Weinstein, J. D. (1990). Measurement of heme efflux and heme content in isolated developing chloroplasts. Plant Physiol. 94, 1414-1423.
45. Voigt, C., Oster, U., Börnke, F., Jahns, P., Dietz, K. J., Leister, D., and Kleine, T. (2010). In-depth analysis of the distinctive effects of norflurazon implies that tetrapyrrole biosynthesis, organellar gene expression and ABA cooperate in the GUN-type of plastid signalling. Physiol. Plant. 138, 503-519.
46. Wasilewska, A., Vlad, F., Sirichandra, C., Redko, Y., Jammes, F., Valon, C., Frei Dit Frey, N., and Leung, J. (2008). An update on abscisic acid signaling in plants and more. Mol. Plant 1, 198-217.
47. Wilson, P. B., Estavillo, G. M., Field, K. J., Pornsiriwong, W., Carroll, A. J., Howell, K. A., Woo, N. S., Lake, J. A., Smith, S. M., Millar, H. A., Von Caemmerer, S., and Pogson, B. J. (2009). The nucleotidase/phosphatase SAL1 is a negative regulator of drought tolerance in Arabidopsis. Plant J. 58, 299-317.
48. Woodson, J. D., Perez-Ruiz, J. M., and Chory, J. (2011). Heme synthesis by plastid ferrochelatase I regulates nuclear gene expression in plants. Curr. Biol. 21, 897-903.