-
1
-
-
0029130801
-
Genetic mapping of floral traits associated with reproductive isolation in monkey flowers (Mimulus)
-
Bradshaw, H. D., S. M. Wilbert, K. G. Otto, and D. W. Schemske, 1995 Genetic mapping of floral traits associated with reproductive isolation in monkey flowers (Mimulus). Nature 376: 762-765.
-
(1995)
Nature
, vol.376
, pp. 762-765
-
-
Bradshaw, H.D.1
Wilbert, S.M.2
Otto, K.G.3
Schemske, D.W.4
-
2
-
-
15644375297
-
Quantitative trait loci affecting differences in floral morphology between two species of monkeyflower (Mimulus)
-
Bradshaw, H. D. J., K. G. Otto, B. E. Frewen, J. K. McKay, and D. W. Schemske, 1998 Quantitative trait loci affecting differences in floral morphology between two species of monkeyflower (Mimulus). Genetics 149: 367-382.
-
(1998)
Genetics
, vol.149
, pp. 367-382
-
-
Bradshaw, H.D.J.1
Otto, K.G.2
Frewen, B.E.3
McKay, J.K.4
Schemske, D.W.5
-
3
-
-
0037958742
-
R/qtl: QTL mapping in experimental crosses
-
Broman, K. W., H. Wu, S. Sen, and G. A. Churchill, 2003 R/qtl: QTL mapping in experimental crosses. Bioinformatics 19: 889-890.
-
(2003)
Bioinformatics
, vol.19
, pp. 889-890
-
-
Broman, K.W.1
Wu, H.2
Sen, S.3
Churchill, G.A.4
-
4
-
-
61849106435
-
Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci
-
Burgess-Herbert, S. L., A. Cox, S.-W. Tsaih, and B. Paigen, 2008 Practical applications of the bioinformatics toolbox for narrowing quantitative trait loci. Genetics 180: 2227-2235.
-
(2008)
Genetics
, vol.180
, pp. 2227-2235
-
-
Burgess-Herbert, S.L.1
Cox, A.2
Tsaih, S.-W.3
Paigen, B.4
-
5
-
-
0028151261
-
Empirical threshold values for quantitative trait mapping
-
Churchill, G. A., and R. W. Doerge, 1994 Empirical threshold values for quantitative trait mapping. Genetics 138: 963-971.
-
(1994)
Genetics
, vol.138
, pp. 963-971
-
-
Churchill, G.A.1
Doerge, R.W.2
-
6
-
-
67349172256
-
A new standard genetic map for the laboratory mouse
-
Cox, A., C. L. Ackert-Bicknell, B. L. Dumont, Y. Ding, J. T. Bell et al., 2009 A new standard genetic map for the laboratory mouse. Genetics 182: 1335-1344.
-
(2009)
Genetics
, vol.182
, pp. 1335-1344
-
-
Cox, A.1
Ackert-Bicknell, C.L.2
Dumont, B.L.3
Ding, Y.4
Bell, J.T.5
-
8
-
-
0025943740
-
Genetic analysis of the morphological differences between maize and teosinte
-
Doebley, J., and A. Stec, 1991 Genetic analysis of the morphological differences between maize and teosinte. Genetics 129: 285-295.
-
(1991)
Genetics
, vol.129
, pp. 285-295
-
-
Doebley, J.1
Stec, A.2
-
9
-
-
72849125317
-
Estimating trait-dependent speciation and extinction rates from incompletely resolved phylogenies
-
Fitzjohn, R. G., W. P. Maddison, and S. P. Otto, 2009 Estimating trait-dependent speciation and extinction rates from incompletely resolved phylogenies. Syst. Biol. 58: 595-611.
-
(2009)
Syst. Biol.
, vol.58
, pp. 595-611
-
-
Fitzjohn, R.G.1
Maddison, W.P.2
Otto, S.P.3
-
10
-
-
33751064527
-
Detecting non-Brownian trait evolution in adaptive radiations
-
Freckleton, R. P., and P. H. Harvey, 2006 Detecting non-Brownian trait evolution in adaptive radiations. PLoS Biol. 4: e373.
-
(2006)
PLoS Biol.
, vol.4
-
-
Freckleton, R.P.1
Harvey, P.H.2
-
11
-
-
0000235172
-
Rate tests for phenotypic evolution using phylogenetically independent contrasts
-
Garland, T., Jr., 1992 Rate tests for phenotypic evolution using phylogenetically independent contrasts. Am. Nat. 140: 509-519.
-
(1992)
Am. Nat.
, vol.140
, pp. 509-519
-
-
Garland Jr., T.1
-
12
-
-
0034001912
-
Using the past to predict the present: Confidence intervals for regression equations in phylogenetic comparative methods
-
Garland, T., Jr., and A. R. Ives, 2000 Using the past to predict the present: confidence intervals for regression equations in phylogenetic comparative methods. Am. Nat. 155: 346-364.
-
(2000)
Am. Nat.
, vol.155
, pp. 346-364
-
-
Garland Jr., T.1
Ives, A.R.2
-
13
-
-
33646942472
-
A simple regression method for mapping quantitative trait loci in line crosses using flanking markers
-
Haley, C. S., and S. A. Knott, 1992 A simple regression method for mapping quantitative trait loci in line crosses using flanking markers. Heredity 69: 315-324.
-
(1992)
Heredity
, vol.69
, pp. 315-324
-
-
Haley, C.S.1
Knott, S.A.2
-
14
-
-
77954297751
-
Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci?
-
Hall, M. C., D. B. Lowry, and J. H. Willis, 2010 Is local adaptation in Mimulus guttatus caused by trade-offs at individual loci? Mol. Ecol. 19: 2739-2753.
-
(2010)
Mol. Ecol.
, vol.19
, pp. 2739-2753
-
-
Hall, M.C.1
Lowry, D.B.2
Willis, J.H.3
-
15
-
-
0030772835
-
Stabilizing selection and the comparative analysis of adaptation
-
Hansen, T., 1997 Stabilizing selection and the comparative analysis of adaptation. Evolution 51: 1341-1351.
-
(1997)
Evolution
, vol.51
, pp. 1341-1351
-
-
Hansen, T.1
-
16
-
-
0024508964
-
Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps
-
Lander, E. S., and D. Botstein, 1989 Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199.
-
(1989)
Genetics
, vol.121
, pp. 185-199
-
-
Lander, E.S.1
Botstein, D.2
-
17
-
-
17144370488
-
Combining data from multiple inbred line crosses improves the power and resolution of quantitative trait loci mapping
-
Li, R., M. A. Lyons, H. Wittenburg, B. Paigen, and G. A. Churchill, 2005 Combining data from multiple inbred line crosses improves the power and resolution of quantitative trait loci mapping. Genetics 169: 1699-1709.
-
(2005)
Genetics
, vol.169
, pp. 1699-1709
-
-
Li, R.1
Lyons, M.A.2
Wittenburg, H.3
Paigen, B.4
Churchill, G.A.5
-
18
-
-
0042995279
-
Quantitative trait loci that determine lipoprotein cholesterol levels in DBA/2J and CAST/Ei inbred mice
-
Lyons, M. A., H. Wittenburg, R. Li, K. A. Walsh, G. A. Churchill et al., 2003a Quantitative trait loci that determine lipoprotein cholesterol levels in DBA/2J and CAST/Ei inbred mice. J. Lipid Res. 44: 953-967.
-
(2003)
J. Lipid Res.
, vol.44
, pp. 953-967
-
-
Lyons, M.A.1
Wittenburg, H.2
Li, R.3
Walsh, K.A.4
Churchill, G.A.5
-
19
-
-
0041993625
-
Lith6: A new QTL for cholesterol gallstones from an intercross of CAST/Ei and DBA/2J inbred mouse strains
-
Lyons, M. A., H. Wittenburg, R. Li, K. A. Walsh, M. R. Leonard et al., 2003b Lith6: a new QTL for cholesterol gallstones from an intercross of CAST/Ei and DBA/2J inbred mouse strains. J. Lipid Res. 44: 1763-1771.
-
(2003)
J. Lipid Res.
, vol.44
, pp. 1763-1771
-
-
Lyons, M.A.1
Wittenburg, H.2
Li, R.3
Walsh, K.A.4
Leonard, M.R.5
-
20
-
-
0141798516
-
New quantitative trait loci that contribute to cholesterol gallstone formation detected in an intercross of CAST/Ei and 129S1/SvImJ inbred mice
-
Lyons, M. A., H. Wittenburg, R. Li, K. A. Walsh, M. R. Leonard et al., 2003c New quantitative trait loci that contribute to cholesterol gallstone formation detected in an intercross of CAST/Ei and 129S1/SvImJ inbred mice. Physiol. Genomics 14: 225-239.
-
(2003)
Physiol. Genomics
, vol.14
, pp. 225-239
-
-
Lyons, M.A.1
Wittenburg, H.2
Li, R.3
Walsh, K.A.4
Leonard, M.R.5
-
21
-
-
34250784724
-
Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster
-
MacDonald, S. J., and A. D. Long, 2007 Joint estimates of quantitative trait locus effect and frequency using synthetic recombinant populations of Drosophila melanogaster. Genetics 176: 1261-1281.
-
(2007)
Genetics
, vol.176
, pp. 1261-1281
-
-
McDonald, S.J.1
Long, A.D.2
-
22
-
-
0031504952
-
Gene trees in species trees
-
Maddison, W., 1997 Gene trees in species trees. Syst. Biol. 46: 523-536.
-
(1997)
Syst. Biol.
, vol.46
, pp. 523-536
-
-
Maddison, W.1
-
23
-
-
34548657597
-
Estimating a binary character's effect on speciation and extinction
-
Maddison, W. P., P. E. Midford, and S. P. Otto, 2007 Estimating a binary character's effect on speciation and extinction. Syst. Biol. 56: 701-710.
-
(2007)
Syst. Biol.
, vol.56
, pp. 701-710
-
-
Maddison, W.P.1
Midford, P.E.2
Otto, S.P.3
-
24
-
-
0035350685
-
Mapping quantitative trait loci in plants: Uses and caveats for evolutionary biology
-
Mauricio, R., 2001 Mapping quantitative trait loci in plants: uses and caveats for evolutionary biology. Nat. Rev. Genet. 2: 370-381.
-
(2001)
Nat. Rev. Genet.
, vol.2
, pp. 370-381
-
-
Mauricio, R.1
-
25
-
-
79960004361
-
Genetics of hybrid male sterility among strains and species in the Drosophila pseudoobscura species group
-
McDermott, S. R., and M. A. Noor, 2011 Genetics of hybrid male sterility among strains and species in the Drosophila pseudoobscura species group. Evolution 65: 1969-1978.
-
(2011)
Evolution
, vol.65
, pp. 1969-1978
-
-
McDermott, S.R.1
Noor, M.A.2
-
26
-
-
35349001696
-
Which evolutionary processes influence natural genetic variation for phenotypic traits
-
Mitchell-Olds, T., J. H. Willis, and D. B. Goldstein, 2007 Which evolutionary processes influence natural genetic variation for phenotypic traits. Nat. Rev. Genet. 8: 845-856.
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 845-856
-
-
Mitchell-Olds, T.1
Willis, J.H.2
Goldstein, D.B.3
-
27
-
-
33744469618
-
The genetic basis of prezygotic reproductive isolation between Drosophila santomea and D. yakuba due to mating preference
-
Moehring, A. J., A. Llopart, S. Elwyn, J. A. Coyne, and T. F. Mackay, 2006 The genetic basis of prezygotic reproductive isolation between Drosophila santomea and D. yakuba due to mating preference. Genetics 173: 215-223.
-
(2006)
Genetics
, vol.173
, pp. 215-223
-
-
Moehring, A.J.1
Llopart, A.2
Elwyn, S.3
Coyne, J.A.4
McKay, T.F.5
-
28
-
-
52049098877
-
Comparative genetics of hybrid incompatibility: Sterility in two Solanum species crosses
-
Moyle, L. C., and T. Nakazato, 2008 Comparative genetics of hybrid incompatibility: sterility in two Solanum species crosses. Genetics 179: 1437-1453.
-
(2008)
Genetics
, vol.179
, pp. 1437-1453
-
-
Moyle, L.C.1
Nakazato, T.2
-
29
-
-
71749095782
-
Reproductive isolation grows on trees
-
Moyle, L. C., and B. A. Payseur, 2009 Reproductive isolation grows on trees. Trends Ecol. Evol. 24: 591-598.
-
(2009)
Trends Ecol. Evol.
, vol.24
, pp. 591-598
-
-
Moyle, L.C.1
Payseur, B.A.2
-
30
-
-
33846521654
-
Disruption of genetic interaction between two autosomal regions and the X chromosome causes reproductive isolation between mouse strains derived from different subspecies
-
Oka, A., T. Aoto, Y. Totsuka, R. Takahashi, M. Ueda et al., 2007 Disruption of genetic interaction between two autosomal regions and the X chromosome causes reproductive isolation between mouse strains derived from different subspecies. Genetics 175: 185-197.
-
(2007)
Genetics
, vol.175
, pp. 185-197
-
-
Oka, A.1
Aoto, T.2
Totsuka, Y.3
Takahashi, R.4
Ueda, M.5
-
31
-
-
0031927739
-
Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data
-
Orr, H. A., 1998 Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data. Genetics 149: 2099-2104.
-
(1998)
Genetics
, vol.149
, pp. 2099-2104
-
-
Orr, H.A.1
-
32
-
-
0033613376
-
Inferring the historical patterns of biological evolution
-
Pagel, M., 1999 Inferring the historical patterns of biological evolution. Nature 401: 877-884.
-
(1999)
Nature
, vol.401
, pp. 877-884
-
-
Pagel, M.1
-
33
-
-
9744245452
-
Bayesian estimation of ancestral character states on phylogenies
-
Pagel, M., A. Meade, and D. Barker, 2004 Bayesian estimation of ancestral character states on phylogenies. Syst. Biol. 53: 673-684.
-
(2004)
Syst. Biol.
, vol.53
, pp. 673-684
-
-
Pagel, M.1
Meade, A.2
Barker, D.3
-
34
-
-
0023822631
-
Relationships between gene trees and species trees
-
Pamilo, P., and M. Nei, 1988 Relationships between gene trees and species trees. Mol. Biol. Evol. 5: 568-583.
-
(1988)
Mol. Biol. Evol.
, vol.5
, pp. 568-583
-
-
Pamilo, P.1
Nei, M.2
-
35
-
-
61949356426
-
TreeQA: Quantitative genome-wide association mapping using local perfect phylogeny trees
-
Pan, F., L. Yang, L. McMillan, F. Pardo-Manuel De Villena, D. Threadgill et al., 2009 TreeQA: quantitative genome-wide association mapping using local perfect phylogeny trees. Pac. Symp. Biocomput. 426: 415-426.
-
(2009)
Pac. Symp. Biocomput.
, vol.426
, pp. 415-426
-
-
Pan, F.1
Yang, L.2
McMillan, L.3
Pardo-Manuel, F.4
de Villena5
Threadgill, D.6
-
36
-
-
0035924332
-
The genetic architecture of divergence between threespine stickleback species
-
Peichel, C. L., K. S. Nereng, K. A. Ohgi, B. L. Cole, P. F. Colosimo et al., 2001 The genetic architecture of divergence between threespine stickleback species. Nature 414: 901-905.
-
(2001)
Nature
, vol.414
, pp. 901-905
-
-
Peichel, C.L.1
Nereng, K.S.2
Ohgi, K.A.3
Cole, B.L.4
Colosimo, P.F.5
-
37
-
-
33750437728
-
Widespread discordance of gene trees with species tree in Drosophila: Evidence for incomplete lineage sorting
-
Pollard, D. A., V. N. Iyer, A. M. Moses, and M. B. Eisen, 2006 Widespread discordance of gene trees with species tree in Drosophila: evidence for incomplete lineage sorting. PLoS Genet. 2: 1634-1647.
-
(2006)
PLoS Genet.
, vol.2
, pp. 1634-1647
-
-
Pollard, D.A.1
Iyer, V.N.2
Moses, A.M.3
Eisen, M.B.4
-
38
-
-
84863304598
-
R: A Language and Environment for Statistical Computing
-
Vienna, Austria., R Development Core Team
-
R Development Core Team, 2010 R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, Vienna, Austria.
-
(2010)
R Foundation for Statistical Computing
-
-
-
39
-
-
0037126073
-
Directional selection is the primary cause of phenotypic diversification
-
Rieseberg, L. H., A. Widmer, A. M. Arntz, and J. M. Burke, 2002 Directional selection is the primary cause of phenotypic diversification. Proc. Natl. Acad. Sci. USA 99: 12242-12245.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 12242-12245
-
-
Rieseberg, L.H.1
Widmer, A.2
Arntz, A.M.3
Burke, J.M.4
-
40
-
-
0031417707
-
Likelihood of ancestor states in adaptive radiation
-
Schluter, D., T. Price, A. O. Mooers, and D. Ludwig, 1997 Likelihood of ancestor states in adaptive radiation. Evolution 51: 1699-1711.
-
(1997)
Evolution
, vol.51
, pp. 1699-1711
-
-
Schluter, D.1
Price, T.2
Mooers, A.O.3
Ludwig, D.4
-
41
-
-
34447120717
-
QTL analysis of a rapidly evolving speciation phenotype in the Hawaiian cricket Laupala
-
Shaw, K. L., Y. M. Parsons, and S. C. Lesnick, 2007 QTL analysis of a rapidly evolving speciation phenotype in the Hawaiian cricket Laupala. Mol. Ecol. 16: 2879-2892.
-
(2007)
Mol. Ecol.
, vol.16
, pp. 2879-2892
-
-
Shaw, K.L.1
Parsons, Y.M.2
Lesnick, S.C.3
-
42
-
-
34548694067
-
Adaptive variation in beach mice produced by two interacting pigmentation genes
-
Steiner, C. C., J. N. Weber, and H. E. Hoekstra, 2007 Adaptive variation in beach mice produced by two interacting pigmentation genes. PLoS Biol. 5: e219.
-
(2007)
PLoS Biol.
, vol.5
-
-
Steiner, C.C.1
Weber, J.N.2
Hoekstra, H.E.3
-
43
-
-
81555202533
-
Multiple routes to mammalian diversity
-
Venditti, C., A. Meade, and M. Pagel, 2011 Multiple routes to mammalian diversity. Nature 479: 393-396.
-
(2011)
Nature
, vol.479
, pp. 393-396
-
-
Venditti, C.1
Meade, A.2
Pagel, M.3
-
44
-
-
73649129187
-
Fine-scale phylogenetic discordance across the house mouse genome
-
White, M. A., C. Ané, C. N. Dewey, B. R. Larget, and B. A. Payseur, 2009 Fine-scale phylogenetic discordance across the house mouse genome. PLoS Genet. 5: e1000729.
-
(2009)
PLoS Genet.
, vol.5
-
-
White, M.A.1
Ané, C.2
Dewey, C.N.3
Larget, B.R.4
Payseur, B.A.5
-
45
-
-
80052739892
-
Genetic dissection of a key reproductive barrier between nascent species of house mice
-
White, M. A., B. Steffy, T. Wiltshire, and B. A. Payseur, 2011 Genetic dissection of a key reproductive barrier between nascent species of house mice. Genetics 189: 289-304.
-
(2011)
Genetics
, vol.189
, pp. 289-304
-
-
White, M.A.1
Steffy, B.2
Wiltshire, T.3
Payseur, B.A.4
-
46
-
-
0041323002
-
FXR and ABCG5/ABCG8 as determinants of cholesterol gallstone formation from quantitative trait locus mapping in mice
-
Wittenburg, H., M. A. Lyons, R. Li, G. A. Churchill, M. C. Carey et al., 2003 FXR and ABCG5/ABCG8 as determinants of cholesterol gallstone formation from quantitative trait locus mapping in mice. Gastroenterology 125: 868-881.
-
(2003)
Gastroenterology
, vol.125
, pp. 868-881
-
-
Wittenburg, H.1
Lyons, M.A.2
Li, R.3
Churchill, G.A.4
Carey, M.C.5
-
47
-
-
24644511633
-
Association of a lithogenic Abcg5/Abcg8 allele on chromosome 17 (Lith9) with cholesterol gallstone formation in PERA/EiJ mice
-
Wittenburg, H., M. A. Lyons, R. Li, U. Kurtz, J. Mossner et al., 2005 Association of a lithogenic Abcg5/Abcg8 allele on chromosome 17 (Lith9) with cholesterol gallstone formation in PERA/EiJ mice. Mamm. Genome 16: 495-504.
-
(2005)
Mamm. Genome
, vol.16
, pp. 495-504
-
-
Wittenburg, H.1
Lyons, M.A.2
Li, R.3
Kurtz, U.4
Mossner, J.5
-
48
-
-
84863176396
-
HTreeQA: Using semiperfect phylogeny trees in quantitative trait loci study on genotype data
-
Zhang, Z., X. Zhang, and W. Wang, 2012 HTreeQA: using semiperfect phylogeny trees in quantitative trait loci study on genotype data. G3: Genes, Genomes, Genetics 2: 175-189.
-
(2012)
G3: Genes, Genomes, Genetics
, vol.2
, pp. 175-189
-
-
Zhang, Z.1
Zhang, X.2
Wang, W.3
-
49
-
-
15544365509
-
Coalescent-based association mapping and fine mapping of complex trait loci
-
Zöllner, S., and J. K. Pritchard, 2005 Coalescent-based association mapping and fine mapping of complex trait loci. Genetics 169: 1071-1092.
-
(2005)
Genetics
, vol.169
, pp. 1071-1092
-
-
Zöllner, S.1
Pritchard, J.K.2
|