메뉴 건너뛰기




Volumn , Issue , 2012, Pages 334-342

A sparsity-inducing formulation for evolutionary co-clustering

Author keywords

bioinformatics; evolutionary co clustering; neuroscience; optimization; sparsity learning

Indexed keywords

BLOCK STRUCTURES; CO-CLUSTERING; DATA MATRICES; DUAL FORM; GRADIENT DESCENT ALGORITHMS; ITERATIVE PROCEDURES; MOUSE BRAIN; NEUROSCIENCE; NON-SMOOTH; ONE DIMENSION; OPTIMAL SOLUTIONS; OPTIMIZATION PROBLEMS; SMOOTHNESS CONSTRAINTS; SPARSITY LEARNING; TEMPORAL DIMENSIONS; TIME-VARYING DATA;

EID: 84866039255     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2339530.2339586     Document Type: Conference Paper
Times cited : (16)

References (36)
  • 1
    • 67849135609 scopus 로고    scopus 로고
    • Recovering time-varying networks of dependencies in social and biological studies
    • A. Ahmed and E. P. Xing. Recovering time-varying networks of dependencies in social and biological studies. Proceedings of the National Academy of Sciences, 106(29):11878-11883, 2009.
    • (2009) Proceedings of the National Academy of Sciences , vol.106 , Issue.29 , pp. 11878-11883
    • Ahmed, A.1    Xing, E.P.2
  • 2
    • 70349637517 scopus 로고    scopus 로고
    • The brain atlas concordance problem: Quantitative comparison of anatomical parcellations
    • 09
    • J. W. Bohland, H. Bokil, C. B. Allen, and P. P. Mitra. The brain atlas concordance problem: Quantitative comparison of anatomical parcellations. PLoS ONE, 4(9):e7200, 09 2009.
    • (2009) PLoS ONE , vol.4 , Issue.9
    • Bohland, J.W.1    Bokil, H.2    Allen, C.B.3    Mitra, P.P.4
  • 3
    • 74149083446 scopus 로고    scopus 로고
    • Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy
    • J. W. Bohland et al. Clustering of spatial gene expression patterns in the mouse brain and comparison with classical neuroanatomy. Methods, 50(2):105-112, 2010.
    • (2010) Methods , vol.50 , Issue.2 , pp. 105-112
    • Bohland, J.W.1
  • 12
    • 0000802374 scopus 로고
    • The approximation of one matrix by another of lower rank
    • C. Eckart and G. Young. The approximation of one matrix by another of lower rank. Psychometrika, 1(3):211-218, 1936.
    • (1936) Psychometrika , vol.1 , Issue.3 , pp. 211-218
    • Eckart, C.1    Young, G.2
  • 16
    • 84861164231 scopus 로고    scopus 로고
    • NeNMF: An optimal gradient method for nonnegative matrix factorization
    • N. Guan, D. Tao, Z. Luo, and B. Yuan. NeNMF: An optimal gradient method for nonnegative matrix factorization. IEEE Transactions on Signal Processing, 60(6):2882-2898, 2012.
    • (2012) IEEE Transactions on Signal Processing , vol.60 , Issue.6 , pp. 2882-2898
    • Guan, N.1    Tao, D.2    Luo, Z.3    Yuan, B.4
  • 18
    • 79952801173 scopus 로고    scopus 로고
    • A path algorithm for the fused Lasso signal approximator
    • H. Höfling. A path algorithm for the fused Lasso signal approximator. Journal of Computational and Graphical Statistics, 19(4):984-1006, 2010.
    • (2010) Journal of Computational and Graphical Statistics , vol.19 , Issue.4 , pp. 984-1006
    • Höfling, H.1
  • 19
    • 82255194258 scopus 로고    scopus 로고
    • Computational network analysis of the anatomical and genetic organizations in the mouse brain
    • S. Ji. Computational network analysis of the anatomical and genetic organizations in the mouse brain. Bioinformatics, 27(23):3293-3299, 2011.
    • (2011) Bioinformatics , vol.27 , Issue.23 , pp. 3293-3299
    • Ji, S.1
  • 20
    • 0037399130 scopus 로고    scopus 로고
    • Spectral biclustering of microarray data: Coclustering genes and conditions
    • Y. Kluger, R. Basri, J. T. Chang, and M. Gerstein. Spectral biclustering of microarray data: Coclustering genes and conditions. Genome Research, 13(4):703-716, 2003.
    • (2003) Genome Research , vol.13 , Issue.4 , pp. 703-716
    • Kluger, Y.1    Basri, R.2    Chang, J.T.3    Gerstein, M.4
  • 21
    • 78650059908 scopus 로고    scopus 로고
    • Biclustering via sparse singular value decomposition
    • M. Lee, H. Shen, J. Z. Huang, and J. S. Marron. Biclustering via sparse singular value decomposition. Biometrics, 66:1087-1095, 2010.
    • (2010) Biometrics , vol.66 , pp. 1087-1095
    • Lee, M.1    Shen, H.2    Huang, J.Z.3    Marron, J.S.4
  • 22
    • 33846252240 scopus 로고    scopus 로고
    • Genome-wide atlas of gene expression in the adult mouse brain
    • E. S. Lein et al. Genome-wide atlas of gene expression in the adult mouse brain. Nature, 445(7124):168-176, 2007.
    • (2007) Nature , vol.445 , Issue.7124 , pp. 168-176
    • Lein, E.S.1
  • 28
    • 84866050365 scopus 로고    scopus 로고
    • A method for visual identification of small sample subgroups and potential biomarkers
    • C. Soneson and M. Fontes. A method for visual identification of small sample subgroups and potential biomarkers. Annals of Applied Statistics, 5(3):2131-2149, 2011.
    • (2011) Annals of Applied Statistics , vol.5 , Issue.3 , pp. 2131-2149
    • Soneson, C.1    Fontes, M.2
  • 31
    • 37249032736 scopus 로고    scopus 로고
    • Spatial smoothing and hot spot detection for CGH data using the fused lasso
    • R. Tibshirani and P. Wang. Spatial smoothing and hot spot detection for CGH data using the fused lasso. Biostatistics, 9(1):18-29, 2008.
    • (2008) Biostatistics , vol.9 , Issue.1 , pp. 18-29
    • Tibshirani, R.1    Wang, P.2
  • 33
    • 0035533631 scopus 로고    scopus 로고
    • Convergence of a block coordinate descent method for nondifferentiable minimization
    • June
    • P. Tseng. Convergence of a block coordinate descent method for nondifferentiable minimization. Journal of Optimization Theory and Applications, 109:475-494, June 2001.
    • (2001) Journal of Optimization Theory and Applications , vol.109 , pp. 475-494
    • Tseng, P.1
  • 35
    • 77955430417 scopus 로고    scopus 로고
    • Orthogonal nonnegative matrix tri-factorization for co-clustering: Multiplicative updates on Stiefel manifolds
    • J. Yoo and S. Choi. Orthogonal nonnegative matrix tri-factorization for co-clustering: Multiplicative updates on Stiefel manifolds. Information Processing and Management, 46(5):559-570, 2010.
    • (2010) Information Processing and Management , vol.46 , Issue.5 , pp. 559-570
    • Yoo, J.1    Choi, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.