Polymerase chain reaction-based tests for pan-species and species-specific detection of human Plasmodium parasites

Transfusion

Volumn 52, Issue 9, 2012, Pages 1949-1956

  Mahajan, Babita ^a,b   Zheng, Hong ^a,b   Pham, Phuong Thao ^a,b   Sedegah, Mary Y ^a,b   Majam, Victoria F ^a,b   Akolkar, Namita ^a,b   Rios, Maria ^a,b   Ankrah, Isaac ^a,b   Madjitey, Parnor ^a,b   Amoah, George ^a,b   Addison, Ebenezer ^a,b   Quakyi, Isabella A ^a,b   Kumar, Sanjai ^a,b  

^a CENTER FOR BIOLOGICS EVALUATION AND RESEARCH   (United States)

^b UNIVERSITY OF GHANA   (Ghana)

Author keywords

[No Author keywords available]

Indexed keywords

HEMOGLOBIN; SAPONIN;

ARTICLE; BLOOD SAMPLING; BLOOD VOLUME; CONCENTRATION (PARAMETERS); CYTOLYSIS; DNA EXTRACTION; ERYTHROCYTE; GHANA; HUMAN; HUMAN CELL; HUMAN TISSUE; LIMIT OF DETECTION; NONHUMAN; PLASMODIUM FALCIPARUM; PLASMODIUM KNOWLESI; PLASMODIUM MALARIAE; PLASMODIUM OVALE; PLASMODIUM VIVAX; POLYMERASE CHAIN REACTION; SENSITIVITY ANALYSIS;

ADOLESCENT; ADULT; AGED; AGED, 80 AND OVER; ANIMALS; BASE SEQUENCE; BLOOD CHEMICAL ANALYSIS; CASE-CONTROL STUDIES; CHILD; CHILD, PRESCHOOL; GHANA; HUMANS; INFANT; MALARIA; MIDDLE AGED; MOLECULAR DIAGNOSTIC TECHNIQUES; MOLECULAR SEQUENCE DATA; PLASMODIUM; POLYMERASE CHAIN REACTION; RNA, PROTOZOAN; RNA, RIBOSOMAL, 18S; SEQUENCE HOMOLOGY, NUCLEIC ACID; SPECIES SPECIFICITY; SUBSTRATE SPECIFICITY; YOUNG ADULT;

EID: 84865797795     PISSN: 00411132     EISSN: 15372995     Source Type: Journal    
DOI: 10.1111/j.1537-2995.2011.03541.x     Document Type: Article

References (26)

1. Ronald R,. An improved method for the microscopical diagnosis of intermittent fever. Lancet 1903; 161: 86.
2. Severe and complicated malaria. World Health Organization, Division of Control of Tropical Diseases. Trans R Soc Trop Med Hyg 1990; 84 Suppl 2: 1-65.
3. Malaria diagnosis: memorandum from a WHO meeting. Bull World Health Organ 1988; 66: 575-94.
4. Akane A, Matsubara K, Nakamura H, Takahashi S, Kimura K,. Identification of the heme compound copurified with deoxyribonucleic acid (DNA) from bloodstains, a major inhibitor of polymerase chain reaction (PCR) amplification. J Forensic Sci 1994; 39: 362-72.
5. Al-Soud WA, Radstrom P,. Purification and characterization of PCR-inhibitory components in blood cells. J Clin Microbiol 2001; 39: 485-93.
6. Andrews L, Andersen RF, Webster D, Dunachie S, Walther RM, Bejon P, Hunt-Cooke A, Bergson G, Sanderson F, Hill AV, Gilbert SC,. Quantitative real-time polymerase chain reaction for malaria diagnosis and its use in malaria vaccine clinical trials. Am J Trop Med Hyg 2005; 73: 191-8.
7. White NJ,. Plasmodium knowlesi: the fifth human malaria parasite. Clin Infect Dis 2008; 46: 172-3.
8. Pain A, Bohme U, Berry AE, Mungall K, Finn RD, Jackson AP, Mourier T, Mistry J, Pasini EM, Aslett MA, Balasubrammaniam S, Borgwardt K, Brooks K, Carret C, Carver TJ, Cherevach I, Chillingworth T, Clark TG, Galinski MR, Hall N, Harper D, Harris D, Hauser H, Ivens A, Berriman M, et al,. The genome of the simian and human malaria parasite Plasmodium knowlesi. Nature 2008; 455: 799-803.
9. Sutherland CJ, Tanomsing N, Nolder D, Oguike M, Jennison C, Pukrittayakamee S, Dolecek C, Hien TT, Rosario VE, Arez AP, Pinto J, Michon P, Escalante AA, Nosten F, Burke M, Lee R, Blaze M, Otto TD, Barnwell JW, Pain A, Williams J, White NJ, Day NP, Snounou G, Polley SD, et al,. Two nonrecombining sympatric forms of the human malaria parasite Plasmodium ovale occur globally. J Infect Dis 2010; 201: 1544-50.
10. Haynes JD, Moch JK,. Automated synchronization of Plasmodium falciparum parasites by culture in a temperature-cycling incubator. Methods Mol Med 2002; 72: 489-97.
11. Chattopadhyay R, Majam VF, Kumar S,. Survival of Plasmodium falciparum in human blood during refrigeration. Transfusion 2011; 51: 630-5.
12. Higuchi R,. Simple and rapid preparation of samples for PCR. In:, Erlich HA, editor. PCR technology: principles and applications for DNA amplification. New York: Stockton Press; 1989. p. 31.
13. Mungai M, Tegtmeier G, Chamberland M, Parise M,. Transfusion-transmitted malaria in the United States from 1963 through 1999. N Engl J Med 2001; 344: 1973-8.
14. Mali S, Steele S, Slutsker L, Arguin PM,. Malaria surveillance-United States, 2006. MMWR Surveill Summ 2008; 57: 24-39.
15. Centers for Disease Control (CDC). Transfusion malaria: serologic identification of infected donors-Pennsylvania, Georgia. MMWR Morb Mortal Wkly Rep 1983; 32: 222-4, 229.
16. Rubio JM, Post RJ, van Leeuwen WM, Henry MC, Lindergard G, Hommel M,. Alternative polymerase chain reaction method to identify Plasmodium species in human blood samples: the semi-nested multiplex malaria PCR (SnM-PCR). Trans R Soc Trop Med Hyg 2002; 96 Suppl 1: S199-204.
17. Zou S, Fujii K, Johnson S, Spencer B, Washington N, Iv EN, Musavi F, Newman B, Cable R, Rios J, Hillyer KL, Hillyer CD, Dodd RY,. Prevalence of selected viral infections among blood donors deferred for potential risk to blood safety. Transfusion 2006; 46: 1997-2003.
18. Busch MP, Wright DJ, Custer B, Tobler LH, Stramer SL, Kleinman SH, Prince HE, Bianco C, Foster G, Petersen LR, Nemo G, Glynn SA,. West Nile virus infections projected from blood donor screening data, United States, 2003. Emerg Infect Dis 2006; 12: 395-402.
19. Salazar LA, Hirata MH, Cavalli SA, Machado MO, Hirata RD,. Optimized procedure for DNA isolation from fresh and cryopreserved clotted human blood useful in clinical molecular testing. Clin Chem 1998; 44: 1748-50.
20. Se Fum Wong S, Kuei JJ, Prasad N, Agonafer E, Mendoza GA, Pemberton TJ, Patel PI,. A simple method for DNA isolation from clotted blood extricated rapidly from serum separator tubes. Clin Chem 2007; 53: 522-4.
21. Basuni AA, Butterworth LA, Cooksley G, Locarnini S, Carman WF,. An efficient extraction method from blood clots for studies requiring both host and viral DNA. J Viral Hepat 2000; 7: 241-3.
22. Iovannisci DM, Ha TT, Shaw GM,. Recovery of genomic DNA from residual frozen archival blood clots suitable for amplification and use in genotyping assays. Genet Test 2006; 10: 44-9.
23. Mayor A, Aponte JJ, Fogg C, Saute F, Greenwood B, Dgedge M, Menendez C, Alonso PL,. The epidemiology of malaria in adults in a rural area of southern Mozambique. Malar J 2007; 6: 3.
24. Roper C, Elhassan IM, Hviid L, Giha H, Richardson W, Babiker H, Satti GM, Theander TG, Arnot DE,. Detection of very low level Plasmodium falciparum infections using the nested polymerase chain reaction and a reassessment of the epidemiology of unstable malaria in Sudan. Am J Trop Med Hyg 1996; 54: 325-31.
25. Hamad AA, El Hassan IM, El Khalifa AA, Ahmed GI, Abdelrahim SA, Theander TG, Arnot DE,. Chronic Plasmodium falciparum infections in an area of low intensity malaria transmission in the Sudan. Parasitology 2000; 120 (Pt 5): 447-56.
26. Kitchen AD, Barbara JA, Hewitt PE,. Documented cases of post-transfusion malaria occurring in England: a review in relation to current and proposed donor-selection guidelines. Vox Sang 2005; 89: 77-80.