-
1
-
-
52049083257
-
RNA STRAND: the RNA secondary structure and statistical analysis database
-
Andronescu M, Bereg V, Hoos HH, Condon A (2008) RNA STRAND: the RNA secondary structure and statistical analysis database. BMC Bioinform 9: 340.
-
(2008)
BMC Bioinform
, vol.9
, pp. 340
-
-
Andronescu, M.1
Bereg, V.2
Hoos, H.H.3
Condon, A.4
-
2
-
-
0036616218
-
The protein data bank
-
Berman HM, Battistuz T, Bhat TN, Bluhm WF, Bourne PE, Burkhardt K, Feng Z, Gilliland GL, Iype L, Jain S, Fagan P, Marvin J, Padilla D, Ravichandran V, Schneider B, Thanki N, Weissig H, Westbrook JD, Zardecki C (2002) The protein data bank. Acta Crystallogr D Biol Crystallogr 58(Pt): 899-907.
-
(2002)
Acta Crystallogr D Biol Crystallogr
, vol.58
, Issue.Pt
, pp. 899-907
-
-
Berman, H.M.1
Battistuz, T.2
Bhat, T.N.3
Bluhm, W.F.4
Bourne, P.E.5
Burkhardt, K.6
Feng, Z.7
Gilliland, G.L.8
Iype, L.9
Jain, S.10
Fagan, P.11
Marvin, J.12
Padilla, D.13
Ravichandran, V.14
Schneider, B.15
Thanki, N.16
Weissig, H.17
Westbrook, J.D.18
Zardecki, C.19
-
3
-
-
0037270547
-
The nucleic acid database
-
Berman HM, Westbrook J, Feng Z, Iype L, Schneider B, Zardecki C (2003) The nucleic acid database. Methods Biochem Anal 44: 199-216.
-
(2003)
Methods Biochem Anal
, vol.44
, pp. 199-216
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Iype, L.4
Schneider, B.5
Zardecki, C.6
-
5
-
-
0037303672
-
Fine mapping of a cis-acting sequence element in yellow fever virus RNA that is required for RNA replication and cyclization
-
Corver J, Lenches E, Smith K, Robison RA, Sando T, Strauss EG, Strauss JH (2003) Fine mapping of a cis-acting sequence element in yellow fever virus RNA that is required for RNA replication and cyclization. J Virol 77(3): 2265-2270.
-
(2003)
J Virol
, vol.77
, Issue.3
, pp. 2265-2270
-
-
Corver, J.1
Lenches, E.2
Smith, K.3
Robison, R.A.4
Sando, T.5
Strauss, E.G.6
Strauss, J.H.7
-
6
-
-
67650727366
-
VARNA: interactive drawing and editing of the RNA secondary structure
-
Darty K, Denise A, Ponty Y (2009) VARNA: interactive drawing and editing of the RNA secondary structure. Bioinformatics 25(15): 1974-1975.
-
(2009)
Bioinformatics
, vol.25
, Issue.15
, pp. 1974-1975
-
-
Darty, K.1
Denise, A.2
Ponty, Y.3
-
8
-
-
0026038913
-
The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency
-
Gallie DR (1991) The cap and poly(A) tail function synergistically to regulate mRNA translational efficiency. Genes Dev 5(11): 2108-2116.
-
(1991)
Genes Dev
, vol.5
, Issue.11
, pp. 2108-2116
-
-
Gallie, D.R.1
-
9
-
-
58149191274
-
Rfam: updates to the RNA families database
-
Gardner PP, Daub J, Tate JG, Nawrocki EP, Kolbe DL, Lindgreen S, Wilkinson AC, Finn RD, Griffiths-Jones S, Eddy SR, Bateman A (2009) Rfam: updates to the RNA families database. Nucleic Acids Res 37(Database): D136-D140.
-
(2009)
Nucleic Acids Res
, vol.37
, Issue.Database
-
-
Gardner, P.P.1
Daub, J.2
Tate, J.G.3
Nawrocki, E.P.4
Kolbe, D.L.5
Lindgreen, S.6
Wilkinson, A.C.7
Finn, R.D.8
Griffiths-Jones, S.9
Eddy, S.R.10
Bateman, A.11
-
10
-
-
0034844254
-
Force-induced denaturation of RNA
-
Gerland U, Bundschuh R, Hwa T (2001) Force-induced denaturation of RNA. Biophys J 81: 1324-1332.
-
(2001)
Biophys J
, vol.81
, pp. 1324-1332
-
-
Gerland, U.1
Bundschuh, R.2
Hwa, T.3
-
11
-
-
0036600570
-
The accuracy of ribosomal RNA comparative structure models
-
Gutell R, Lee J, Cannone J (2005) The accuracy of ribosomal RNA comparative structure models. Curr Opin Struct Biol 12: 301-310.
-
(2005)
Curr Opin Struct Biol
, vol.12
, pp. 301-310
-
-
Gutell, R.1
Lee, J.2
Cannone, J.3
-
12
-
-
0043123153
-
Vienna RNA secondary structure server
-
Hofacker I (2003) Vienna RNA secondary structure server. Nucleic Acids Res 31(13): 3429-3431.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3429-3431
-
-
Hofacker, I.1
-
13
-
-
0000287314
-
Combinatorics of RNA secondary structures
-
Hofacker IL, Schuster P, Stadler PF (1998) Combinatorics of RNA secondary structures. Discret Appl Math 88: 207-237. http://citeseer. nj. nec. com/1454. html.
-
(1998)
Discret Appl Math
, vol.88
, pp. 207-237
-
-
Hofacker, I.L.1
Schuster, P.2
Stadler, P.F.3
-
15
-
-
0023445054
-
Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle
-
Hsu MT, Parvin JD, Gupta S, Krystal M, Palese P (1987) Genomic RNAs of influenza viruses are held in a circular conformation in virions and in infected cells by a terminal panhandle. Proc Natl Acad Sci USA 84(22): 8140-8144.
-
(1987)
Proc Natl Acad Sci USA
, vol.84
, Issue.22
, pp. 8140-8144
-
-
Hsu, M.T.1
Parvin, J.D.2
Gupta, S.3
Krystal, M.4
Palese, P.5
-
18
-
-
0025264854
-
The equilibrium partition function and base pair binding probabilities for RNA secondary structure
-
McCaskill J (1990) The equilibrium partition function and base pair binding probabilities for RNA secondary structure. Biopolymers 29: 1105-1119.
-
(1990)
Biopolymers
, vol.29
, pp. 1105-1119
-
-
McCaskill, J.1
-
19
-
-
33748945417
-
Long-distance RNA-RNA interactions in plant virus gene expression and replication
-
Miller WA, White KA (2006) Long-distance RNA-RNA interactions in plant virus gene expression and replication. Annu Rev Phytopathol 44: 447-467.
-
(2006)
Annu Rev Phytopathol
, vol.44
, pp. 447-467
-
-
Miller, W.A.1
White, K.A.2
-
20
-
-
0019082587
-
Fast algorithm for predicting the secondary structure of single stranded RNA
-
Nussinov R, Jacobson AB (1980) Fast algorithm for predicting the secondary structure of single stranded RNA. Proc Natl Acad Sci USA 77(11): 6309-6313.
-
(1980)
Proc Natl Acad Sci USA
, vol.77
, Issue.11
, pp. 6309-6313
-
-
Nussinov, R.1
Jacobson, A.B.2
-
21
-
-
0031804156
-
Compilation of tRNA sequences and sequences of tRNA genes
-
Sprinzl M, Horn C, Brown M, Ioudovitch A, Steinberg S (1998) Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res 26: 148-153.
-
(1998)
Nucleic Acids Res
, vol.26
, pp. 148-153
-
-
Sprinzl, M.1
Horn, C.2
Brown, M.3
Ioudovitch, A.4
Steinberg, S.5
-
22
-
-
0000765114
-
On some new sequences generalizing the Catalan and Motzkin numbers
-
Stein PR, Waterman MS (1978) On some new sequences generalizing the Catalan and Motzkin numbers. Discret Math 26: 261-272.
-
(1978)
Discret Math
, vol.26
, pp. 261-272
-
-
Stein, P.R.1
Waterman, M.S.2
-
23
-
-
0032552882
-
Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs
-
Xia T, SantaLucia J, Burkard M, Kierzek R, Schroeder S, Jiao X, Cox C, Turner D (1999) Thermodynamic parameters for an expanded nearest-neighbor model for formation of RNA duplexes with Watson-Crick base pairs. Biochemistry 37(14): 719-735.
-
(1999)
Biochemistry
, vol.37
, Issue.14
, pp. 719-735
-
-
Xia, T.1
Santalucia, J.2
Burkard, M.3
Kierzek, R.4
Schroeder, S.5
Jiao, X.6
Cox, C.7
Turner, D.8
-
24
-
-
78651284122
-
The ends of a large RNA molecule are necessarily close
-
Yoffe AM, Prinsen P, Gelbart WM, Ben-Shaul A (2011) The ends of a large RNA molecule are necessarily close. Nucleic Acids Res 39(1): 292-299.
-
(2011)
Nucleic Acids Res
, vol.39
, Issue.1
, pp. 292-299
-
-
Yoffe, A.M.1
Prinsen, P.2
Gelbart, W.M.3
Ben-Shaul, A.4
-
25
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker M (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res 31(13): 3406-3415.
-
(2003)
Nucleic Acids Res
, vol.31
, Issue.13
, pp. 3406-3415
-
-
Zuker, M.1
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