메뉴 건너뛰기




Volumn 17, Issue 2, 2012, Pages 147-153

Functional genomic methods to study estrogen receptor activity

Author keywords

Breast cancer; Chromatin immunoprecipitation; Estrogen receptor; FAIRE; Functional genomics; Hormone resistance; Tamoxifen

Indexed keywords

EPIDERMAL GROWTH FACTOR; ESTROGEN RECEPTOR; FULVESTRANT; HEPATOCYTE NUCLEAR FACTOR 3ALPHA; RNA POLYMERASE II; TAMOXIFEN; TRANSCRIPTION FACTOR GATA 3;

EID: 84865748567     PISSN: 10833021     EISSN: 15737039     Source Type: Journal    
DOI: 10.1007/s10911-012-9254-4     Document Type: Article
Times cited : (12)

References (24)
  • 1
    • 51149092061 scopus 로고    scopus 로고
    • The role of hormonal therapy in the management of hormonal-receptor- positive breast cancer with co-expression of HER2
    • Prat A, Baselga J. The role of hormonal therapy in the management of hormonal-receptor-positive breast cancer with co-expression of HER2. Nat Clin Pract Oncol. 2008;5:531.
    • (2008) Nat Clin Pract Oncol , vol.5 , pp. 531
    • Prat, A.1    Baselga, J.2
  • 2
    • 33645033984 scopus 로고    scopus 로고
    • ERalpha and ERbeta expression and transcriptional activity are differentially regulated by HDAC inhibitors
    • Duong V, et al. ERalpha and ERbeta expression and transcriptional activity are differentially regulated by HDAC inhibitors. Oncogene. 2006;25:1799.
    • (2006) Oncogene. , vol.25 , pp. 1799
    • Duong, V.1
  • 3
    • 0141785350 scopus 로고    scopus 로고
    • Profiling of estrogen up-and down-regulated gene expression in human breast cancer cells: Insights into gene networks and pathways underlying estrogenic control of proliferation and cell phenotype
    • Frasor J, et al. Profiling of estrogen up-and down-regulated gene expression in human breast cancer cells: Insights into gene networks and pathways underlying estrogenic control of proliferation and cell phenotype. Endocrinology. 2003;144:4562.
    • (2003) Endocrinology , vol.144 , pp. 4562
    • Frasor, J.1
  • 5
    • 0033637703 scopus 로고    scopus 로고
    • Cofactor dynamics and sufficiency in estrogen receptor-regulated transcription
    • Shang Y, Hu X, DiRenzo J, Lazar MA, Brown M. Cofactor dynamics and sufficiency in estrogen receptor-regulated transcription. Cell. 2000;103:843.
    • (2000) Cell. , vol.103 , pp. 843
    • Shang, Y.1    Hu, X.2    DiRenzo, J.3    Lazar, M.A.4    Brown, M.5
  • 6
    • 33748743807 scopus 로고    scopus 로고
    • Impact of estrogen receptor beta on gene networks regulated by estrogen receptor alpha in breast cancer cells
    • Chang EC, Frasor J, Komm B, Katzenellenbogen BS. Impact of estrogen receptor beta on gene networks regulated by estrogen receptor alpha in breast cancer cells. Endocrinology. 2006;147:4831.
    • (2006) Endocrinology , vol.147 , pp. 4831
    • Chang, E.C.1    Frasor, J.2    Komm, B.3    Katzenellenbogen, B.S.4
  • 7
    • 33746600263 scopus 로고    scopus 로고
    • Estrogen receptor target gene: An evolving concept
    • Carroll JS, Brown M. Estrogen receptor target gene: An evolving concept. Mol Endocrinol. 2006;20:1707.
    • (2006) Mol Endocrinol , vol.20 , pp. 1707
    • Carroll, J.S.1    Brown, M.2
  • 8
    • 33746752125 scopus 로고    scopus 로고
    • A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation
    • Narita M, et al. A novel role for high-mobility group a proteins in cellular senescence and heterochromatin formation. Cell. 2006;126:503.
    • (2006) Cell. , vol.126 , pp. 503
    • Narita, M.1
  • 9
    • 67649834440 scopus 로고    scopus 로고
    • ChIP-seq: Using high-throughput sequencing to discover protein-DNA interactions
    • Schmidt D, et al. ChIP-seq: Using high-throughput sequencing to discover protein-DNA interactions. Methods. 2009;48:240.
    • (2009) Methods , vol.48 , pp. 240
    • Schmidt, D.1
  • 10
    • 57349113761 scopus 로고    scopus 로고
    • Regulation of ERBB2 by oestrogen receptor-PAX2 determines response to tamoxifen
    • Hurtado A, et al. Regulation of ERBB2 by oestrogen receptor-PAX2 determines response to tamoxifen. Nature. 2008;456:663.
    • (2008) Nature , vol.456 , pp. 663
    • Hurtado, A.1
  • 11
    • 84858779028 scopus 로고    scopus 로고
    • Androgen receptor driven transcription in molecular apocrine breast cancer is mediated by FoxA1
    • Robinson JL, et al. Androgen receptor driven transcription in molecular apocrine breast cancer is mediated by FoxA1. EMBO J. 2012;31:1617.
    • (2012) EMBO J , vol.31 , pp. 1617
    • Robinson, J.L.1
  • 12
    • 33750442923 scopus 로고    scopus 로고
    • Genome-wide analysis of estrogen receptor binding sites
    • Carroll JS, et al. Genome-wide analysis of estrogen receptor binding sites. Nat Genet. 2006;38:1289.
    • (2006) Nat Genet , vol.38 , pp. 1289
    • Carroll, J.S.1
  • 13
    • 34347345081 scopus 로고    scopus 로고
    • Whole-genome cartography of estrogen receptor alpha binding sites
    • Lin CY, et al. Whole-genome cartography of estrogen receptor alpha binding sites. PLoS Genet. 2007;3:e87.
    • (2007) PLoS Genet. , vol.3
    • Lin, C.Y.1
  • 14
    • 70449103609 scopus 로고    scopus 로고
    • An oestrogen-receptor-alpha-bound human chromatin interactome
    • Fullwood MJ, et al. An oestrogen-receptor-alpha-bound human chromatin interactome. Nature. 2009;462:58.
    • (2009) Nature , vol.462 , pp. 58
    • Fullwood, M.J.1
  • 15
    • 75149194937 scopus 로고    scopus 로고
    • Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer
    • Ross-Innes CS, et al. Cooperative interaction between retinoic acid receptor-alpha and estrogen receptor in breast cancer. Genes Dev. 2010;24:171.
    • (2010) Genes Dev , vol.24 , pp. 171
    • Ross-Innes, C.S.1
  • 16
    • 80052398200 scopus 로고    scopus 로고
    • Cellular reprogramming by the conjoint action of ERalpha, FOXA1, and GATA3 to a ligand-inducible growth state
    • Kong SL, Li G, Loh SL, Sung WK, Liu ET. Cellular reprogramming by the conjoint action of ERalpha, FOXA1, and GATA3 to a ligand-inducible growth state. Mol Syst Biol. 2011;7:526.
    • (2011) Mol Syst Biol , vol.7 , pp. 526
    • Kong, S.L.1    Li, G.2    Loh, S.L.3    Sung, W.K.4    Liu, E.T.5
  • 17
    • 77957673898 scopus 로고    scopus 로고
    • Growth factor stimulation induces a distinct ER (alpha) cistrome underlying breast cancer endocrine resistance
    • Lupien M, et al. Growth factor stimulation induces a distinct ER (alpha) cistrome underlying breast cancer endocrine resistance. Genes Dev. 2010;24:2219.
    • (2010) Genes Dev , vol.24 , pp. 2219
    • Lupien, M.1
  • 18
    • 84856008906 scopus 로고    scopus 로고
    • Differential oestrogen receptor binding is associated with clinical outcome in breast cancer
    • Ross-Innes CS, et al. Differential oestrogen receptor binding is associated with clinical outcome in breast cancer. Nature. 2012;481:389.
    • (2012) Nature , vol.481 , pp. 389
    • Ross-Innes, C.S.1
  • 19
    • 66549085342 scopus 로고    scopus 로고
    • ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands
    • Welboren WJ, et al. ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands. EMBO J. 2009;28:1418.
    • (2009) EMBO J. , vol.28 , pp. 1418
    • Welboren, W.J.1
  • 20
    • 55549097836 scopus 로고    scopus 로고
    • Mapping short DNA sequencing reads and calling variants using mapping quality scores
    • Li H, Ruan J, Durbin R. Mapping short DNA sequencing reads and calling variants using mapping quality scores. Genome Res. 2008;18:1851.
    • (2008) Genome Res. , vol.18 , pp. 1851
    • Li, H.1    Ruan, J.2    Durbin, R.3
  • 21
    • 33644874573 scopus 로고    scopus 로고
    • The UCSC genome browser database: Update 2006
    • Hinrichs AS, et al. The UCSC genome browser database: Update 2006. Nucleic Acids Res. 2006;34:D590.
    • (2006) Nucleic Acids Res. , vol.34
    • Hinrichs, A.S.1
  • 22
    • 53849146020 scopus 로고    scopus 로고
    • Model-based analysis of ChIP-Seq (MACS)
    • Zhang Y, et al. Model-based analysis of ChIP-Seq (MACS). Genome Biol. 2008;9:R137.
    • (2008) Genome Biol. , vol.9
    • Zhang, Y.1
  • 23
    • 9444225935 scopus 로고    scopus 로고
    • Java Treeview-extensible visualization of microarray data
    • Saldanha AJ. Java Treeview-extensible visualization of microarray data. Bioinformatics. 2004;20:3246.
    • (2004) Bioinformatics , vol.20 , pp. 3246
    • Saldanha, A.J.1
  • 24
    • 67649524640 scopus 로고    scopus 로고
    • Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements)
    • Giresi PG, Lieb JD. Isolation of active regulatory elements from eukaryotic chromatin using FAIRE (Formaldehyde Assisted Isolation of Regulatory Elements). Methods. 2009;48:233.
    • (2009) Methods , vol.48 , pp. 233
    • Giresi, P.G.1    Lieb, J.D.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.