Analysis of local spread of metamitron-resistant Chenopodium album patches in Belgium

Weed Research

Volumn 52, Issue 5, 2012, Pages 421-429

  Aper, J ^a   Mechant, E ^a   De Riek, J ^b   Van Laere, K ^b   Bulcke, R ^a   Reheul, D ^a  

^a GHENT UNIVERSITY   (Belgium)

^b INSTITUTE FOR AGRICULTURAL AND FISHERIES RESEARCH ILVO   (Belgium)

Author keywords

Amplified fragment length polymorphism; CHEAL; Fat hen; Genetic differentiation; Herbicide resistance; Photosystem II inhibitors

Indexed keywords

AGRICULTURAL TECHNOLOGY; BIOTYPE; GENETIC DIFFERENTIATION; GENETIC MARKER; HARVESTING; HERB; HERBICIDE; MAIZE; MANURE; MIGRATION; MUTATION; PESTICIDE RESISTANCE; PHOTOSYNTHESIS; POLYMORPHISM; SUGAR BEET; WEED CONTROL;

BELGIUM; WEST FLANDERS;

BETA VULGARIS SUBSP. VULGARIS; CHENOPODIUM ALBUM; CHENOPODIUM BONUS-HENRICUS; ZEA MAYS;

EID: 84865742651     PISSN: 00431737     EISSN: 13653180     Source Type: Journal    
DOI: 10.1111/j.1365-3180.2012.00928.x     Document Type: Article

References (56)

1. Al Mouemar A & Gasquez J (1983) Environmental conditions and isozyme polymorphism in Chenopodium album L. Weed Research 23, 141-149.
2. Andrews TS, Morrison IN & Penner GA (1998) Monitoring the spread of ACCase inhibitor resistance among wild oat (Avena fatua) patches using AFLP analysis. Weed Science 46, 196-199.
3. Aper J, De Riek J, Mechant E et al. (2010) The origin of herbicide-resistant Chenopodium album: analysis of genetic variation and population structure. Weed Research 50, 235-244.
4. Bassett IJ & Crompton CW (1978) Biology of Canadian weeds 32. Chenopodium album L. Canadian Journal of Plant Science 58, 1061-1072.
5. Bennet MD, Leitch IJ & Hanson L (1998) DNA amounts in two samples of angiosperm weeds. Annals of Botany 82, 121-134.
6. Bonin A, Bellemain E, Eidesen PB et al. (2004) How to track and assess genotyping errors in population genetics studies. Molecular Ecology 13, 3261-3273.
7. Bouwmeester HJ & Karssen CM (1993) Seasonal periodicity in germination of seeds of Chenopodium album L. Annals of Botany 72, 463-473.
8. Coart E, Van Glabeke S, Petit RJ, Van Bockstaele E & Roldan-Ruiz I (2005) Range wide versus local patterns of genetic diversity in hornbeam (Carpinus betulus L.). Conservation Genetics 6, 259-273.
9. Darmency H & Gasquez J (1990) Appearance and spread of triazine resistance in common lambsquarters (Chenopodium album). Weed Technology 4, 173-177.
10. De Marez T, Mechant E, Hermann O, Olsson R & Bulcke R (2008) Monitoring for resistance to metamitron in Chenopodium album. Journal of Plant Diseases and Protection, 21, 85-90.
11. De Riek J, Dendauw J, Mertens M et al. (1999) Validation of criteria for the selection of AFLP markers to assess the genetic variation of a breeders' collection of evergreen azaleas. Theoretical and Applied Genetics 99, 1155-1165.
12. De Riek J, Calsyn E, Everaert I, Van Bockstaele E & De Loose M (2001) AFLP based alternatives for the assessment of Distinctness, Uniformity and Stability of sugar beet varieties. Theoretical and Applied Genetics 103, 1254-1265.
13. De Schepper S, Leus L, Mertens M et al. (2001) Flow cytometric analysis of ploidy in Rhododendron (subgenus Tsutsusi). HortScience 36, 125-127.
14. Dolezel J, Dolezelova M & Novak FJ (1994) Flow cytometric estimation of nuclear DNA amount in diploid bananas (Musa acuminata and M. balbisiana). Biologia Plantarum 36, 351-357.
15. Doohan D, Wilson R, Canales E & Parker J (2010) Investigating the human dimension of weed management: new tools of the trade. Weed Science 58, 503-510.
16. Doyle J & Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin 19, 11-15.
17. Evanno G, Regnaut S & Goudet J (2005) Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14, 2611-2620.
18. Falush D, Stephens M & Pritchard JK (2007) Inference of population structure using multilocus genotype data: dominant markers and null alleles. Molecular Ecology Notes 7, 574-578.
19. Felsenstein J (2008) PHYLIP (Phylogeny Inference Package) Version 3.68. Department of Genetics, University of Washington, Seattle.
20. Froud-Williams RJ (2002) Weed competition. In: Weed Management Handbook. 9th edn. (ed REL Naylor ), 126-148. Blackwell Science, Oxford.
21. Galbraith DW, Harkins KR, Maddox JM et al. (1983) Rapid flow cytometric analysis of the cell-cycle in intact plant tissues. Science 220, 1049-1051.
22. Gasquez J (1985) Breeding system and genetic structure of a Chenopodium album population according to crop and herbicide rotation. In: Genetic Differentiation and Dispersal in Plants. (eds P Jacquard, G Heim & J Antonovics ), 57-66. Springer, Berlin.
23. Haldimann P, Steinger T & Muller-Scharer H (2003) Low genetic differentiation among seasonal cohorts in Senecio vulgaris as revealed by amplified fragment length polymorphism analysis. Molecular Ecology 12, 2541-2551.
24. Hartl DL & Clark AG (1997) Principles of Population Genetics, 3rd edn. Sinauer associates, Sunderland.
25. Hijmans RJ, Guarino L & Jarvis A (2009) DIVA-GIS version 7.0.2.1. Available at http://www.diva-gis.org/ (last accessed 19/09/2011).
26. Hirschberg J & McIntosh L (1983) Molecular basis of herbicide resistance in Amaranthus hybridus. Science 222, 1346-1349.
27. Holm LG, Pucknett DL, Pancho JV & Herberger J (1977) The World's Worst Weeds: Distribution and Biology. University Press of Hawaii, Honolulu.
28. Huff DR, Peakall R & Smouse PE (1993) RAPD variation within and among natural populations of outcrossing buffalograss (Buchloe dactyloides (Nutt) Engelm.). Theoretical and Applied Genetics 86, 927-934.
29. Kumar S, Tamura K & Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5, 150-163.
30. Lowe A, Harris S & Ashton P (2004) Ecological Genetics: Design, Analysis, and Application. Blackwell Publishing, Oxford.
31. Mantel N (1967) Detection of disease clustering and a generalized regression approach. Cancer Research 27, 209-220.
32. Mechant E & Bulcke R (2006) Cross-resistance profile of metamitron-resistant Chenopodium album L. biotypes from sugar beet. Journal of Plant Diseases and Protection, 20, 147-153.
33. Mechant E, Bulcke R & Maeghe L (2005) Resistance to metamitron in Chenopodium album from sugar beet A tale of the (un)expected? Communications in Agricultural and Applied Biological Sciences 70, 501-506.
34. Mechant E, De Marez T, Hermann O, Olsson R & Bulcke R (2008) Target site resistance to metamitron in Chenopodium album L. Journal of Plant Diseases and Protection, 21, 37-40.
35. Mechant E, De Marez T, Vroman G et al. (2010) Distribution of metamitron-resistant Chenopodium album L. in Belgian sugar beet. Communications in Agricultural and Applied Biological Sciences 75, 53-59.
36. Meirmans PG, Goudet J & Gaggiotti OE (2011) Ecology and life history affect different aspects of the population structure of 27 high-alpine plants. Molecular Ecology 20, 3144-3155.
37. Müller-Schärer H & Fischer M (2001) Genetic structure of the annual weed Senecio vulgaris in relation to habitat type and population size. Molecular Ecology 10, 17-28.
38. Nybom H (2004) Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology 13, 1143-1155.
39. Otto F (1990) DAPI staining of fixed cells for high resolution flow cytometry of nuclear DNA. Methods in Cell Biology 33, 105-110.
40. Peakall R & Smouse PE (2006) GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6, 288-295.
41. Peakall R & Smouse PE (2009) GenAlEx Tutorials - Part 3: Spatial Genetic Analysis. Australian National University, Canberra.
42. Peakall R & Smouse PE (2010) GenAlEx 6.4 - Appendix 1- Methods and Statistics. Australian National University, Canberra.
43. Peakall R, Ruibal M & Lindenmayer DB (2003) Spatial autocorrelation analysis offers new insights into gene flow in the Australian bush rat, Rattus fuscipes. Evolution 57, 1182-1195.
44. Petersen J & Varrelmann M (2010) Ein neuer Gänsefuβ-Biotyp mit resistenz gegenüber metribuzin und metamitron. In: Vortragsveranstaltung: 2. Herbizidsymposium Rübe von FCS, Göttingen.
45. Pritchard JK, Stephens M & Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155, 945-959.
46. Schroeder D, Mueller-Schaerer H & Stinson CSA (1993) A European weed survey in 10 major crop systems to identify targets for biological control. Weed Research 33, 449-458.
47. Slotta TAB (2008) What we know about weeds: insights from genetic markers. Weed Science 56, 322-326.
48. Smouse PE & Peakall R (1999) Spatial autocorrelation analysis of individual multiallele and multilocus genetic structure. Heredity 82, 561-573.
49. Stevens OA (1932) The number and weight of seeds produced by weeds. American Journal of Botany 19, 784-794.
50. Thill DC & Mallory-Smith CA (1997) The nature and consequence of weed spread in cropping systems. Weed Science 45, 337-342.
51. Vekemans X (2002) AFLP-SURV Version 1.0. Laboratoire de Génétique et Ecologie Végétale, Université Libre de Bruxelles, Brussels.
52. Vekemans X, Beauwens T, Lemaire M & Roldan-Ruiz I (2002) Data from amplified fragment length polymorphism (AFLP) markers show indication of size homoplasy and of a relationship between degree of homoplasy and fragment size. Molecular Ecology 11, 139-151.
53. VLM (2002) Vectoriële versie van de Landbouwgebruikspercelen. Agentschap voor Geografische Informatie Vlaanderen, Gent.
54. Vos P, Hogers R, & Bleeker M et al. (1995) AFLP - a new technique for DNA-fingerprinting. Nucleic Acids Research 23, 4407-4414.
55. Warwick SI & Marriage PB (1982) Geographical variation in populations of Chenopodium album resistant and susceptible to atrazine.1. Between- and within-population variation in growth and response to atrazine. Canadian Journal of Botany-Revue Canadienne De Botanique 60, 483-493.
56. Whitlock R, Hipperson H, Mannarelli M, Butlin RK & Burke T (2008) An objective, rapid and reproducible method for scoring AFLP peak-height data that minimizes genotyping error. Molecular Ecology Resources 8, 725-735.