Candida sirachaensis sp. nov. and candida sakaeoensis sp. nov. two anamorphic yeast species from phylloplane in thailand

Antonie van Leeuwenhoek, International Journal of General and Molecular Microbiology

Volumn 102, Issue 2, 2012, Pages 221-229

  Limtong, Savitree ^a,b   Koowadjanakul, Nampueng ^a   Jindamorakot, Sasitorn ^c   Yongmanitchai, Wichien ^b   Nakase, Takashi ^c  

^a KASETSART UNIVERSITY   (Thailand)

^b National Research University   (Thailand)

^c NATIONAL SCIENCE AND TECHNOLOGY DEVELOPMENT AGENCY   (Thailand)

Author keywords

Anamorphic yeast; Candida sakaeoensis sp. nov.; Candida sirachaensis sp. nov.; Lodderomyces Spathaspora clade; Phylloplane; Starmerella clade; Thailand

Indexed keywords

LARGE SUBUNIT RIBOSOMAL RNA;

ANAMORPH; ARTICLE; CANDIDA; CANDIDA SAKAEOENSIS; CANDIDA SIRACHAENSIS; CHEMOTAXONOMY; FUNGAL STRAIN; FUNGAL STRUCTURES; GENE SEQUENCE; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENETIC TREE; PRIORITY JOURNAL; SEQUENCE ANALYSIS; STRAIN DIFFERENCE; THAILAND;

APOCYNACEAE; CANDIDA; DNA, FUNGAL; FABACEAE; MOLECULAR SEQUENCE DATA; PHYLOGENY; PLANT LEAVES; PTEROCARPUS; RNA, RIBOSOMAL; THAILAND;

CANDIDA; LODDEROMYCES; STARMERELLA;

EID: 84865711486     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-012-9728-9     Document Type: Article

References (27)

1. Altschul SF, Madden TL, Schäffer JZ, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25:3389-3402 (Pubitemid 27359211)
2. Andrews JH, Harris RE (2000) The ecology and biogeography of microorganisms on plant surfaces. Ann Rev Phytopathol 38:145-180
3. de Azeredo LAI, Gomes EAT, Mendonca-Hagler LC, Hagler AN (1998) Yeast communities associated with sugarcane in Campos, Rio de Janeiro. Brazil Int Microbiol 1:205-208 (Pubitemid 128731332)
4. Felsenstein J (1985) Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39:783-791
5. Fonseca A, Inacio J (2006) Phylloplane yeasts. In: Rosa C, Peter G (eds) Biodiversity and ecophysiology of yeasts. Springer, Berlin, pp 263-301
6. Glushakova AM, Chernov IY (2010) Seasonal dynamics of the structure of epiphytic yeast communities. Microbiology 79:830-839
7. Glushakova AM, Yurkov AM, Chernov IY (2007) Massive isolation of anamorphous ascomycete yeasts Candida oleophila from plant phyllosphere. Microbiology 76:799-803 (Pubitemid 350233778)
8. Ina'cio J, Rodrigues MG, Sobral P, Fonseca A (2004) Characterisation and classification of phylloplane yeasts from Portugal related to the genus Taphrina and description of five novel Lalaria species. FEMS Yeast Res 4:541-555I
9. nácio J, Portugal L, Spencer-Martins I, Fonseca A (2005) Phylloplane yeasts from Portugal: seven novel anamorphic species in the Tremellales lineage of the Hymenomycetes (Basidiomycota) producing orange-coloured colonies. FEMS Yeast Res 5:1167-1183 (Pubitemid 41607737)
10. Kimura M (1980) A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111-120 (Pubitemid 11166431)
11. Koowadjanakul N, Jindamorakot S, Yongmanitchai W, Limtong S (2011) Ogataea phyllophila sp. nov., Candida chumphonensis sp. nov. and Candida mattranensis sp. nov., three methylotrophic yeast species from phylloplane in Thailand. Antonie Van Leeuwenhoek 100:207-217
12. Kuraishi H, Katayama-Fujimura Y, Sugiyama J, Yokoyama T (1985) Ubiquinone systems in fungi. I. Distribution of ubiquinones in the major families of ascomycetes, basidiomycetes, and deuteromycetes, and their taxonomic implications. Trans Mycol Soc Jpn 26:383-395
13. Lachance M-A, Boekhout T, Scorzetti G, Fell JW, Kurtzman CP (2011) Candida Berkhout. In: Kurtzman CP, Fell JW, Boekhout T (eds) The yeasts, a taxonomic study, 5th edn. Elsevier, Amsterdam, pp 987-1279
14. Landell MF, Billodre R, Ramos JP, Leoncini O, Vainstein MH, Valente P (2010) Candida aechmeae sp. nov. and Candida vrieseae sp. nov., novel yeast species isolated from the phylloplane of bromeliads in Southern Brazil. Int J Syst Evol Microbiol 60:244-248
15. Limtong S, Yongmanitchai W, Tun MM, Kawasaki H, Seki T (2007) Kazachstania siamensis sp. nov., an ascomycetous yeast species from forest soil in Thailand. Int J Syst Evol Microbiol 57:419-422
16. Nakase T, SuzukiM(1986) Bullera megalospora, a new species of yeast forming larger ballistospores isolated from dead leaves of Oryza sativa, Miscanthus sinesis and Sasa sp. in Japan. J Gen Appl Microbiol 32:225-240
17. Nakase T, Takashima M, Itoh M, Fungsin B, Potacharoen W, Atthasampunna P, Komagata K (2001) Ballistoconidiumfroming yeasts found in the phyllosphere of Thailand. Microbiol Cult Coll 17:23-33
18. Nakase T, Jindamorakot S, Ninomiya S, Imanashi Y, Kawasaki H (2009) Candida wancherniae sp. nov. and Candida morakotiae sp. nov., two novel ascomycetous anamorphic yeast species found in Thailand. J Gen Appl Microbiol 55:93-100
19. Nguyen NH, Suh SO, Blackwell M (2007) Five Candida novel species in insect-Associated yeast clades isolated from Neuroptera and other insects. Mycologia 99:842-858 (Pubitemid 351198224)
20. Phaff HJ, Starmer WT (1987) Yeasts associated with plants, insects and soil. In: Rose AH, Harrison JS (eds) The yeasts, 2nd edn. Academic, London, pp 123-180
21. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
22. Slavikova E, Vadkertiova R, Vranova D (2009) Yeasts colonizing the leaves of fruit trees. Ann Microbiol 59:419-424
23. Suh SO, Nguyen NH, Blackwell M (2008) Yeasts isolated from plant-Associated beetles and other insects: seven novel Candida species near Candida albicans. FEMS Yeast Res 8:88-102
24. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) CLUSTALX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882 (Pubitemid 28022245)
25. Yamada Y, Kondo K (1973) Coenzyme Q system in the classification of the yeast genera Rhodotorula and Cryptococcus, and the yeast-like genera Sporobolomyces and Rhodosporidium. J Gen Appl Microbiol 19:59-77
26. White TJ, Bruns T, Lee S, Taylor JW (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ (eds) PCR protocols: a guide to methods and applications, Academic Press, New York, pp 315-322
27. Yarrow D (1998) Methods for the isolation, maintenance and identification of yeasts. In: Kurtzman CP, Fell JW (eds) The yeasts, a taxonomic study, 4th edn. Elsevier, Amsterdam, pp 77-100