메뉴 건너뛰기




Volumn 6, Issue , 2012, Pages

Evolutionary principles and synthetic biology: Avoiding a molecular tragedy of the commons with an engineered phage

Author keywords

[No Author keywords available]

Indexed keywords

CAPSID PROTEIN; ENDOSIALIDASE; SIALIDASE; UNCLASSIFIED DRUG;

EID: 84865638177     PISSN: None     EISSN: 17541611     Source Type: Journal    
DOI: 10.1186/1754-1611-6-13     Document Type: Article
Times cited : (24)

References (26)
  • 1
    • 33747160179 scopus 로고    scopus 로고
    • Social evolution theory for microorganisms
    • [PMID: 16845430] 10.1038/nrmicro1461, 16845430
    • West SA, Griffin AS, Gardner A, Diggle SP. Social evolution theory for microorganisms. Nat Rev Microbiol 2006, 4(8):597-607. [PMID: 16845430] [http://www.ncbi.nlm.nih.gov/pubmed/16845430], 10.1038/nrmicro1461, 16845430.
    • (2006) Nat Rev Microbiol , vol.4 , Issue.8 , pp. 597-607
    • West, S.A.1    Griffin, A.S.2    Gardner, A.3    Diggle, S.P.4
  • 2
    • 47149099785 scopus 로고    scopus 로고
    • The tragedy of the commons in microbial populations: insights from theoretical, comparative and experimental studies
    • [PMID: 18449959] , 10.1038/sj.hdy.6801073, 18449959
    • MacLean RC. The tragedy of the commons in microbial populations: insights from theoretical, comparative and experimental studies. Heredity 2008, 100(5):471-477. [PMID: 18449959] [http://www.ncbi.nlm.nih.gov/pubmed/18449959], 10.1038/sj.hdy.6801073, 18449959.
    • (2008) Heredity , vol.100 , Issue.5 , pp. 471-477
    • MacLean, R.C.1
  • 3
    • 34547448587 scopus 로고    scopus 로고
    • Dispersing biofilms with engineered enzymatic bacteriophage
    • [PMID: 17592147] [], 10.1073/pnas.0704624104, 1899193, 17592147
    • Lu TK, Collins JJ. Dispersing biofilms with engineered enzymatic bacteriophage. Proc Nat Acad Sci USA 2007, 104(27):11197-11202. [PMID: 17592147] [http://www.ncbi.nlm.nih.gov/pubmed/17592147], 10.1073/pnas.0704624104, 1899193, 17592147.
    • (2007) Proc Nat Acad Sci USA , vol.104 , Issue.27 , pp. 11197-11202
    • Lu, T.K.1    Collins, J.J.2
  • 4
    • 23744448545 scopus 로고    scopus 로고
    • Escherichia coli K1's capsule is a barrier to bacteriophage T7
    • [PMID: 16085886]
    • Scholl D, Adhya S, Merril C. Escherichia coli K1's capsule is a barrier to bacteriophage T7. Appl and Environ Microbiol 2005, 71(8):4872-4874. [PMID: 16085886] [http://www.ncbi.nlm.nih.gov/pubmed/16085886].
    • (2005) Appl and Environ Microbiol , vol.71 , Issue.8 , pp. 4872-4874
    • Scholl, D.1    Adhya, S.2    Merril, C.3
  • 5
    • 0014413249 scopus 로고
    • The tragedy of the commons
    • Hardin G. The tragedy of the commons. Science 1968, 162(3859):1243-1248.
    • (1968) Science , vol.162 , Issue.3859 , pp. 1243-1248
    • Hardin, G.1
  • 6
    • 62749122252 scopus 로고    scopus 로고
    • Limited dispersal, budding dispersal, and cooperation: an experimental study
    • [PMID: 19154373], 10.1111/j.1558-5646.2008.00548.x, 23349054
    • Kümmerli R, Gardner A, West SA, Griffin AS. Limited dispersal, budding dispersal, and cooperation: an experimental study. Evol; Int J Org Evol 2009, 63(4):939-949. [PMID: 19154373] [http://www.ncbi.nlm.nih.gov/pubmed/19154373], 10.1111/j.1558-5646.2008.00548.x, 23349054.
    • (2009) Evol; Int J Org Evol , vol.63 , Issue.4 , pp. 939-949
    • Kümmerli, R.1    Gardner, A.2    West, S.A.3    Griffin, A.S.4
  • 7
    • 72449199550 scopus 로고    scopus 로고
    • Demography and the tragedy of the commons
    • [PMID: 19912449]
    • Frank SA. Demography and the tragedy of the commons. J Evolutionary Biol 2010, 23:32-39. [PMID: 19912449] [http://www.ncbi.nlm.nih.gov/pubmed/19912449].
    • (2010) J Evolutionary Biol , vol.23 , pp. 32-39
    • Frank, S.A.1
  • 8
    • 21844441735 scopus 로고    scopus 로고
    • The T7 group
    • New York: Oxford University Press, Calendar R. Oxford
    • Molineux I. The T7 group. The Bacteriophages 2006, 277-301. New York: Oxford University Press, Calendar R. Oxford .
    • (2006) The Bacteriophages , pp. 277-301
    • Molineux, I.1
  • 9
    • 70349964350 scopus 로고    scopus 로고
    • Automated design of synthetic ribosome binding sites to control protein expression
    • 10.1038/nbt.1568, 2782888, 19801975
    • Salis HM, Mirsky EA, Voigt CA. Automated design of synthetic ribosome binding sites to control protein expression. Nat Biotechnol 2009, 27:946-950. 10.1038/nbt.1568, 2782888, 19801975.
    • (2009) Nat Biotechnol , vol.27 , pp. 946-950
    • Salis, H.M.1    Mirsky, E.A.2    Voigt, C.A.3
  • 10
    • 84873469664 scopus 로고    scopus 로고
    • Phage in display
    • New York: Oxford University Press, Calendar R. Oxford
    • Lindqvist BH. Phage in display. The Bacteriophages 2006, 686-694. New York: Oxford University Press, Calendar R. Oxford .
    • (2006) The Bacteriophages , pp. 686-694
    • Lindqvist, B.H.1
  • 11
    • 0022346257 scopus 로고
    • Identification of an inducible catabolic system for sialic acids (nan) in Escherichia coli
    • [PMID: 3902799]], 214328, 3902799
    • Vimr ER, Troy FA. Identification of an inducible catabolic system for sialic acids (nan) in Escherichia coli. J Bacteriol 1985, 164(2):845-853. [PMID: 3902799] [http://www.ncbi.nlm.nih.gov/pubmed/3902799], 214328, 3902799.
    • (1985) J Bacteriol , vol.164 , Issue.2 , pp. 845-853
    • Vimr, E.R.1    Troy, F.A.2
  • 12
    • 84858138505 scopus 로고    scopus 로고
    • Small RNA fragments in complex culture media cause alterations in protein profiles of three species of bacteria
    • [PMID: 22401549]
    • Pavankumar AR, Ayyappasamy SP, Sankaran K. Small RNA fragments in complex culture media cause alterations in protein profiles of three species of bacteria. BioTechniques 2012, 52(3):167-172. [PMID: 22401549] [http://www.ncbi.nlm.nih.gov/pubmed/22401549].
    • (2012) BioTechniques , vol.52 , Issue.3 , pp. 167-172
    • Pavankumar, A.R.1    Ayyappasamy, S.P.2    Sankaran, K.3
  • 13
    • 80052416573 scopus 로고    scopus 로고
    • Alternative fates of paused ribosomes during translation termination
    • [PMID: 21757758] , 10.1074/jbc.M111.268201, 3173060, 21757758
    • Seidman JS, Janssen BD, Hayes CS. Alternative fates of paused ribosomes during translation termination. J Biol Chem 2011, 286(36):31105-31112. [PMID: 21757758] [http://www.ncbi.nlm.nih.gov/pubmed/21757758], 10.1074/jbc.M111.268201, 3173060, 21757758.
    • (2011) J Biol Chem , vol.286 , Issue.36 , pp. 31105-31112
    • Seidman, J.S.1    Janssen, B.D.2    Hayes, C.S.3
  • 14
    • 24044532239 scopus 로고    scopus 로고
    • Treatment of experimental Escherichia coli infection with recombinant bacteriophage-derived capsule depolymerase
    • [PMID: 15914489], 10.1093/jac/dki177, 15914489
    • Mushtaq N, Redpath MB, Luzio JP, Taylor PW. Treatment of experimental Escherichia coli infection with recombinant bacteriophage-derived capsule depolymerase. J Antimicrob Chemother 2005, 56:160-165. [PMID: 15914489] [http://www.ncbi.nlm.nih.gov/pubmed/15914489], 10.1093/jac/dki177, 15914489.
    • (2005) J Antimicrob Chemother , vol.56 , pp. 160-165
    • Mushtaq, N.1    Redpath, M.B.2    Luzio, J.P.3    Taylor, P.W.4
  • 15
    • 75849137202 scopus 로고    scopus 로고
    • A tale of tails: Sialidase is key to success in a model of phage therapy against K1-capsulated Escherichia coli
    • [PMID: 20006993] [], 10.1016/j.virol.2009.11.040, 2843586, 20006993
    • Bull JJ, Vimr ER, Molineux IJ. A tale of tails: Sialidase is key to success in a model of phage therapy against K1-capsulated Escherichia coli. Virology 2010, 398:79-86. [PMID: 20006993] [http://www.ncbi.nlm.nih.gov/pubmed/20006993], 10.1016/j.virol.2009.11.040, 2843586, 20006993.
    • (2010) Virology , vol.398 , pp. 79-86
    • Bull, J.J.1    Vimr, E.R.2    Molineux, I.J.3
  • 16
    • 58149458887 scopus 로고    scopus 로고
    • [PMID: 19127304] , 10.1371/journal.pone.0004115, 2614108, 19127304
    • Bull JJ, Harcombe WR. PloS One 2009, 4:e4115. [PMID: 19127304] [http://www.ncbi.nlm.nih.gov/pubmed/19127304], 10.1371/journal.pone.0004115, 2614108, 19127304.
    • (2009) PloS One , vol.4
    • Bull, J.J.1    Harcombe, W.R.2
  • 17
    • 70349622980 scopus 로고    scopus 로고
    • Viscous medium promotes cooperation in the pathogenic bacterium Pseudomonas aeruginosa
    • [PMID: 19605393], Griffin A S West S A
    • Kümmerli R, Buckling A, Harrison F, Griffin A S West S A Viscous medium promotes cooperation in the pathogenic bacterium Pseudomonas aeruginosa. Proc Biol Sci /R Soc 2009, 276(1672):3531-3538. [PMID: 19605393] [http://www.ncbi.nlm.nih.gov/pubmed/19605393], Griffin A S West S A.
    • (2009) Proc Biol Sci /R Soc , vol.276 , Issue.1672 , pp. 3531-3538
    • Kümmerli, R.1    Buckling, A.2    Harrison, F.3
  • 19
    • 77956466302 scopus 로고    scopus 로고
    • Unrestricted migration favours virulent pathogens in experimental metapopulations: evolutionary genetics of a rapacious life history
    • [PMID: 20643740]
    • Eshelman CM, Vouk R, Stewart JL, Halsne E, Lindsey HA, Schneider S, Gualu M, Dean AM, Kerr B. Unrestricted migration favours virulent pathogens in experimental metapopulations: evolutionary genetics of a rapacious life history. Philos Trans R Soc London, Ser B , Biol Sci 2010, 365(1552):2503-2513. [PMID: 20643740] [http://www.ncbi.nlm.nih.gov/pubmed/20643740].
    • (2010) Philos Trans R Soc London, Ser B , Biol Sci , vol.365 , Issue.1552 , pp. 2503-2513
    • Eshelman, C.M.1    Vouk, R.2    Stewart, J.L.3    Halsne, E.4    Lindsey, H.A.5    Schneider, S.6    Gualu, M.7    Dean, A.M.8    Kerr, B.9
  • 20
    • 84859441711 scopus 로고    scopus 로고
    • Tragedy of the commons among antibiotic resistance plasmids
    • [PMID: 22486703] , 10.1111/j.1558-5646.2011.01531.x, 23349054
    • Smith J. Tragedy of the commons among antibiotic resistance plasmids. Evol; Int J Org Evol 2012, 66(4):1269-1274. [PMID: 22486703] [http://www.ncbi.nlm.nih.gov/pubmed/22486703], 10.1111/j.1558-5646.2011.01531.x, 23349054.
    • (2012) Evol; Int J Org Evol , vol.66 , Issue.4 , pp. 1269-1274
    • Smith, J.1
  • 21
    • 79955432184 scopus 로고    scopus 로고
    • The T7-related Pseudomonas putida phage phi-15 displays virion-associated biofilm degradation properties
    • [PMID: 21526174] [], 10.1371/journal.pone.0018597, 3079711, 21526174
    • Cornelissen A, Ceyssens P, T'Syen J, Van Praet H, Noben J, Shaburova OV, Krylov VN, Volckaert G, Lavigne R. The T7-related Pseudomonas putida phage phi-15 displays virion-associated biofilm degradation properties. PloS One 2011, 6(4):e18597. [PMID: 21526174] [http://www.ncbi.nlm.nih.gov/pubmed/21526174], 10.1371/journal.pone.0018597, 3079711, 21526174.
    • (2011) PloS One , vol.6 , Issue.4
    • Cornelissen, A.1    Ceyssens, P.2    T'Syen, J.3    Van Praet, H.4    Noben, J.5    Shaburova, O.V.6    Krylov, V.N.7    Volckaert, G.8    Lavigne, R.9
  • 22
    • 10544233778 scopus 로고    scopus 로고
    • Transcription-independent DNA translocation of bacteriophage T7 DNA into Escherichia coli
    • [PMID: 8955315], 178594, 8955315
    • García LR, Molineux IJ. Transcription-independent DNA translocation of bacteriophage T7 DNA into Escherichia coli. J Bacteriol 1996, 178(23):6921-6929. [PMID: 8955315] [http://www.ncbi.nlm.nih.gov/pubmed/8955315], 178594, 8955315.
    • (1996) J Bacteriol , vol.178 , Issue.23 , pp. 6921-6929
    • García, L.R.1    Molineux, I.J.2
  • 23
    • 42449101317 scopus 로고    scopus 로고
    • Predicting evolution from genomics: experimental evolution of bacteriophage T7
    • [PMID: 18212807] , 10.1038/sj.hdy.6801087, 18212807
    • Bull JJ, Molineux IJ. Predicting evolution from genomics: experimental evolution of bacteriophage T7. Heredity 2008, 100(5):453-463. [PMID: 18212807] [http://www.ncbi.nlm.nih.gov/pubmed/18212807], 10.1038/sj.hdy.6801087, 18212807.
    • (2008) Heredity , vol.100 , Issue.5 , pp. 453-463
    • Bull, J.J.1    Molineux, I.J.2
  • 24
    • 0000696532 scopus 로고
    • Cloning and expression of the gene for bacteriophage T7 RNA polymerase
    • [PMID: 6371808] , 10.1073/pnas.81.7.2035, 345431, 6371808
    • Davanloo P, Rosenberg AH, Dunn JJ, Studier FW. Cloning and expression of the gene for bacteriophage T7 RNA polymerase. Proc Nat Acad Sci USA 1984, 81(7):2035-2039. [PMID: 6371808] [http://www.ncbi.nlm.nih.gov/pubmed/6371808], 10.1073/pnas.81.7.2035, 345431, 6371808.
    • (1984) Proc Nat Acad Sci USA , vol.81 , Issue.7 , pp. 2035-2039
    • Davanloo, P.1    Rosenberg, A.H.2    Dunn, J.J.3    Studier, F.W.4
  • 25
    • 0347914560 scopus 로고    scopus 로고
    • Genomic analysis of bacteriophages SP6 and K1-5, an estranged subgroup of the T7 supergroup
    • [PMID: 14729334], 10.1016/j.jmb.2003.11.035, 14729334
    • Scholl D, Kieleczawa J, Kemp P, Rush J, Richardson CC, Merril C, Adhya S, Molineux IJ. Genomic analysis of bacteriophages SP6 and K1-5, an estranged subgroup of the T7 supergroup. J Mol Biol 2004, 335(5):1151-1171. [PMID: 14729334] [http://www.ncbi.nlm.nih.gov/pubmed/14729334], 10.1016/j.jmb.2003.11.035, 14729334.
    • (2004) J Mol Biol , vol.335 , Issue.5 , pp. 1151-1171
    • Scholl, D.1    Kieleczawa, J.2    Kemp, P.3    Rush, J.4    Richardson, C.C.5    Merril, C.6    Adhya, S.7    Molineux, I.J.8
  • 26
    • 0034035485 scopus 로고    scopus 로고
    • Big-benefit mutations in a bacteriophage inhibited with heat
    • [PMID: 10833201], 10.1093/oxfordjournals.molbev.a026375, 10833201
    • Bull JJ, Badgett MR, Wichman HA. Big-benefit mutations in a bacteriophage inhibited with heat. Mol Biol Evol 2000, 17(6):942-950. [PMID: 10833201] [http://www.ncbi.nlm.nih.gov/pubmed/10833201], 10.1093/oxfordjournals.molbev.a026375, 10833201.
    • (2000) Mol Biol Evol , vol.17 , Issue.6 , pp. 942-950
    • Bull, J.J.1    Badgett, M.R.2    Wichman, H.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.