메뉴 건너뛰기




Volumn 110, Issue 4, 2012, Pages 777-785

Population structure of the wild soybean (Glycine soja) in China: Implications from microsatellite analyses

Author keywords

genetic diversity; Glycine soja; microsatellites; population structure; Wild soybean

Indexed keywords

MICROSATELLITE DNA; PLANT DNA;

EID: 84865526892     PISSN: 03057364     EISSN: 10958290     Source Type: Journal    
DOI: 10.1093/aob/mcs142     Document Type: Article
Times cited : (42)

References (53)
  • 1
    • 0023496815 scopus 로고
    • Intraspecific phylogeography: The mitochondrial DNA bridge between population genetics and systematics
    • Avise JC, Arnold J, Ball RM, et al. 1987. Intraspecific phylogeography: the mitochondrial DNA bridge between population genetics and systematics. Annual Review of Ecology and Systematics 18: 489-522.
    • (1987) Annual Review of Ecology and Systematics , vol.18 , pp. 489-522
    • Avise, J.C.1    Arnold, J.2    Ball, R.M.3
  • 2
    • 0000156374 scopus 로고
    • Phylogenetic analysis: Models and estimation procedures
    • Cavalli-Sforza L, Edwards A. 1967. Phylogenetic analysis: models and estimation procedures. Evolution 21: 550-570.
    • (1967) Evolution , vol.21 , pp. 550-570
    • Cavalli-Sforza, L.1    Edwards, A.2
  • 3
    • 52949083935 scopus 로고    scopus 로고
    • Broadening the genetic base of soybean: A multidisciplinary approach
    • Chung G, Singh RJ. 2008. Broadening the genetic base of soybean: a multidisciplinary approach. Plant Science 27: 295-341.
    • (2008) Plant Science , vol.27 , pp. 295-341
    • Chung, G.1    Singh, R.J.2
  • 4
    • 0030478757 scopus 로고    scopus 로고
    • Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data
    • Cornuet JM, Luikart G. 1996. Description and power analysis of two tests for detecting recent population bottlenecks from allele frequency data. Genetics 144: 2001-2014.
    • (1996) Genetics , vol.144 , pp. 2001-2014
    • Cornuet, J.M.1    Luikart, G.2
  • 5
    • 0032873891 scopus 로고    scopus 로고
    • An integrated genetic linkage map of the soybean genome
    • Cregan PB, Jarvik T, Bush AL, et al. 1999. An integrated genetic linkage map of the soybean genome. Crop Science 39: 1464-1490.
    • (1999) Crop Science , vol.39 , pp. 1464-1490
    • Cregan, P.B.1    Jarvik, T.2    Bush, A.L.3
  • 6
    • 77952010413 scopus 로고    scopus 로고
    • History, achievements, and current status of genetic resources conservation
    • Damania AB. 2008. History, achievements, and current status of genetic resources conservation. Agronomy Journal 100: 9-21.
    • (2008) Agronomy Journal , vol.100 , pp. 9-21
    • Damania, A.B.1
  • 8
    • 0002594984 scopus 로고
    • A rapid DNA isolation procedure for small quantities of fresh leaf tissue
    • Doyle JJ, Doyle JL. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemical Bulletin 19: 11-15.
    • (1987) Phytochemical Bulletin , vol.19 , pp. 11-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 9
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • Evanno G, Regnaut S, Goudet J. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study. Molecular Ecology 14: 2611-2620.
    • (2005) Molecular Ecology , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 10
    • 85007110786 scopus 로고    scopus 로고
    • Arlequin version 3.0: An integrated software package for population genetics data analysis
    • Excoffier L, Laval G, Schneider S. 2005. Arlequin version 3.0: an integrated software package for population genetics data analysis. Evolutionary Bioinformatics Online 1: 47-50.
    • (2005) Evolutionary Bioinformatics Online , vol.1 , pp. 47-50
    • Excoffier, L.1    Laval, G.2    Schneider, S.3
  • 16
    • 77956049763 scopus 로고    scopus 로고
    • A single origin and moderate bottleneck during domestication of soybean (Glycine max): Implications from microsatellites and nucleotide sequences
    • Guo J, Wang Y, Song C, et al. 2010. A single origin and moderate bottleneck during domestication of soybean (Glycine max): implications from microsatellites and nucleotide sequences. Annals of Botany 106: 505-514.
    • (2010) Annals of Botany , vol.106 , pp. 505-514
    • Guo, J.1    Wang, Y.2    Song, C.3
  • 17
    • 34249004733 scopus 로고    scopus 로고
    • The use of wild relatives in crop improvement: A survey of developments over the last 20 years
    • Hajjar R, Hodgkin T. 2007. The use of wild relatives in crop improvement: a survey of developments over the last 20 years. Euphytica 156: 1-13.
    • (2007) Euphytica , vol.156 , pp. 1-13
    • Hajjar, R.1    Hodgkin, T.2
  • 20
    • 0034702196 scopus 로고    scopus 로고
    • The genetic legacy of the Quaternary ice ages
    • Hewitt GM. 2000. The genetic legacy of the Quaternary ice ages. Nature 405: 907-913.
    • (2000) Nature , vol.405 , pp. 907-913
    • Hewitt, G.M.1
  • 24
    • 33645017202 scopus 로고    scopus 로고
    • Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation
    • Kuroda Y, Kaga A, Tomooka N, Vaughan DA. 2006. Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation. Molecular Ecology 15: 959-974.
    • (2006) Molecular Ecology , vol.15 , pp. 959-974
    • Kuroda, Y.1    Kaga, A.2    Tomooka, N.3    Vaughan, D.A.4
  • 25
    • 70450277521 scopus 로고    scopus 로고
    • Genetic diversity of wild soybean (Glycine soja Sieb. et Zucc.) and Japanese cultivated soybeans [G. max (L.) Merr.] based on microsatellite (SSR) analysis and the selection of a core collection
    • Kuroda Y, Tomooka N, Kaga A, Wanigadeva S, Vaughan D. 2009. Genetic diversity of wild soybean (Glycine soja Sieb. et Zucc.) and Japanese cultivated soybeans [G. max (L.) Merr.] based on microsatellite (SSR) analysis and the selection of a core collection. Genetic Resources and Crop Evolution 56: 1045-1055.
    • (2009) Genetic Resources and Crop Evolution , vol.56 , pp. 1045-1055
    • Kuroda, Y.1    Tomooka, N.2    Kaga, A.3    Wanigadeva, S.4    Vaughan, D.5
  • 26
    • 42449097988 scopus 로고    scopus 로고
    • Genetic diversity of wild soybean (Glycine soja Sieb. and Zucc.) accessions from South Korea and other countries
    • Lee JD, Yu JK, Hwang YH, et al. 2008. Genetic diversity of wild soybean (Glycine soja Sieb. and Zucc.) accessions from South Korea and other countries. Crop Science 48: 606-616.
    • (2008) Crop Science , vol.48 , pp. 606-616
    • Lee, J.D.1    Yu, J.K.2    Hwang, Y.H.3
  • 27
    • 48149110247 scopus 로고
    • Studies on the ecological and geographical distribution of the Chinese resources of wild soybean (G. soja)
    • Li FS. 1993. Studies on the ecological and geographical distribution of the Chinese resources of wild soybean (G. soja). Scientia Agriculture Sinica 26: 47-55.
    • (1993) Scientia Agriculture Sinica , vol.26 , pp. 47-55
    • Li, F.S.1
  • 28
    • 70649090345 scopus 로고    scopus 로고
    • Genetic diversity and differentiation of Chinese wild soybean germplasm (G. soja Sieb. & Zucc.) in geographical scale revealed by SSR markers
    • Li XH, Wang KJ, Jia JZ. 2009. Genetic diversity and differentiation of Chinese wild soybean germplasm (G. soja Sieb. & Zucc.) in geographical scale revealed by SSR markers. Plant Breeding 128: 658-664.
    • (2009) Plant Breeding , vol.128 , pp. 658-664
    • Li, X.H.1    Wang, K.J.2    Jia, J.Z.3
  • 29
    • 77956271697 scopus 로고    scopus 로고
    • Genetic diversity in domesticated soybean (Glycine max) and its wild progenitor (Glycine soja) for simple sequence repeat and single-nucleotide polymorphism loci
    • Li Y-H, Li W, Zhang C, et al. 2010. Genetic diversity in domesticated soybean (Glycine max) and its wild progenitor (Glycine soja) for simple sequence repeat and single-nucleotide polymorphism loci. New Phytologist 188: 242-253.
    • (2010) New Phytologist , vol.188 , pp. 242-253
    • Li, Y.-H.1    Li, W.2    Zhang, C.3
  • 30
    • 0031866781 scopus 로고    scopus 로고
    • Distortion of allele frequency distributions provides a test for recent population bottlenecks
    • Luikart G, Allendorf FW, Cornuet JM, Sherwin WB. 1998. Distortion of allele frequency distributions provides a test for recent population bottlenecks. Journal of Heredity 89: 238-247.
    • (1998) Journal of Heredity , vol.89 , pp. 238-247
    • Luikart, G.1    Allendorf, F.W.2    Cornuet, J.M.3    Sherwin, W.B.4
  • 33
    • 0018147653 scopus 로고
    • Estimation of average heterozygosity and genetic distance from a small number of individuals
    • Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.
    • (1978) Genetics , vol.89 , pp. 583-590
    • Nei, M.1
  • 34
    • 1942485952 scopus 로고    scopus 로고
    • Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants
    • Nybom H. 2004. Comparison of different nuclear DNA markers for estimating intraspecific genetic diversity in plants. Molecular Ecology 13: 1143-1155.
    • (2004) Molecular Ecology , vol.13 , pp. 1143-1155
    • Nybom, H.1
  • 35
    • 33644871292 scopus 로고    scopus 로고
    • GENALEX 6: Genetic analysis in Excel. Population genetic software for teaching and research
    • Peakall ROD, Smouse PE. 2006. GENALEX 6: genetic analysis in Excel. Population genetic software for teaching and research. Molecular Ecology Notes 6: 288-295.
    • (2006) Molecular Ecology Notes , vol.6 , pp. 288-295
    • Peakall, R.O.D.1    Smouse, P.E.2
  • 38
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155: 945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 39
    • 0036175458 scopus 로고    scopus 로고
    • Genetic diversity and conservation and utilization of plant genetic resources
    • Rao RV, Hodgkin T. 2002. Genetic diversity and conservation and utilization of plant genetic resources. Plant Cell, Tissue and Organ Culture 68: 1-19.
    • (2002) Plant Cell, Tissue and Organ Culture , vol.68 , pp. 1-19
    • Rao, R.V.1    Hodgkin, T.2
  • 40
    • 1342331102 scopus 로고    scopus 로고
    • DISTRUCT: A program for the graphical display of population structure
    • Rosenberg NA. 2004. DISTRUCT: a program for the graphical display of population structure. Molecular Ecology Notes 4: 137-138.
    • (2004) Molecular Ecology Notes , vol.4 , pp. 137-138
    • Rosenberg, N.A.1
  • 41
    • 0042705028 scopus 로고    scopus 로고
    • Phylogenetic relationships of the chloroplast genomes in the genus Glycine inferred from four intergenic spacer sequences
    • Sakai M, Kanazawa A, Fujii A, Thseng FS, Abe J, Shimamoto Y. 2003. Phylogenetic relationships of the chloroplast genomes in the genus Glycine inferred from four intergenic spacer sequences. Plant Systematics and Evolution 239: 29-54.
    • (2003) Plant Systematics and Evolution , vol.239 , pp. 29-54
    • Sakai, M.1    Kanazawa, A.2    Fujii, A.3    Thseng, F.S.4    Abe, J.5    Shimamoto, Y.6
  • 43
    • 0031723296 scopus 로고    scopus 로고
    • RFLPs of chloroplast and mitochondrial DNA in wild soybean, Glycine soja, growing in China
    • Shimamoto Y, Fukushi H, Abe J, et al. 1998. RFLPs of chloroplast and mitochondrial DNA in wild soybean, Glycine soja, growing in China. Genetic Resources and Crop Evolution 45: 433-439.
    • (1998) Genetic Resources and Crop Evolution , vol.45 , pp. 433-439
    • Shimamoto, Y.1    Fukushi, H.2    Abe, J.3
  • 44
    • 0023159436 scopus 로고
    • Gene flow and the geographic structure of natural populations
    • Slatkin M. 1987. Gene flow and the geographic structure of natural populations. Science 236: 787-792.
    • (1987) Science , vol.236 , pp. 787-792
    • Slatkin, M.1
  • 45
    • 0000062913 scopus 로고
    • A comparison of three indirect methods for estimating average levels of gene flow
    • Slatkin M, Barton NH. 1989. A comparison of three indirect methods for estimating average levels of gene flow. Evolution 43: 1349-1368.
    • (1989) Evolution , vol.43 , pp. 1349-1368
    • Slatkin, M.1    Barton, N.H.2
  • 47
    • 0030880972 scopus 로고    scopus 로고
    • Seed banks and molecular maps: Unlocking genetic potential from the wild
    • Tanksley SD, McCouch SR. 1997. Seed banks and molecular maps: unlocking genetic potential from the wild. Science 277: 1063-1666.
    • (1997) Science , vol.277 , pp. 1063-1666
    • Tanksley, S.D.1    McCouch, S.R.2
  • 48
    • 33845263947 scopus 로고    scopus 로고
    • Biodiversity conservation: Uncertainty in predictions of extinction risk/Effects of changes in climate and land use/Climate change and extinction risk (reply)
    • Thomas CD, Williams SE, Cameron A, et al. 2004. Biodiversity conservation: uncertainty in predictions of extinction risk/Effects of changes in climate and land use/Climate change and extinction risk (reply). Nature 430: 1-2.
    • (2004) Nature , vol.430 , pp. 1-2
    • Thomas, C.D.1    Williams, S.E.2    Cameron, A.3
  • 50
    • 67650450854 scopus 로고    scopus 로고
    • Genetic diversity and peculiarity of annual wild soybean (G. soja Sieb.et Zucc.) from various eco-regions in China
    • Wen ZX, Ding YL, Zhao TJ, Gai JY. 2009. Genetic diversity and peculiarity of annual wild soybean (G. soja Sieb.et Zucc.) from various eco-regions in China. Theoretical and Applied Genetics 119: 371-381.
    • (2009) Theoretical and Applied Genetics , vol.119 , pp. 371-381
    • Wen, Z.X.1    Ding, Y.L.2    Zhao, T.J.3    Gai, J.Y.4
  • 51
    • 84855667071 scopus 로고
    • Analysis of ecotypes of wild soybean (G. soja) in China
    • Xu B, Lu QH, Zhuang BC. 1987. Analysis of ecotypes of wild soybean (G. soja) in China. Scientia Agriculture Sinica 20: 29-35.
    • (1987) Scientia Agriculture Sinica , vol.20 , pp. 29-35
    • Xu, B.1    Lu, Q.H.2    Zhuang, B.C.3
  • 53
    • 0036942644 scopus 로고    scopus 로고
    • Diversity of chloroplast DNA SSRs in wild and cultivated soybeans: Evidence for multiple origins of cultivated soybean
    • Xu DX, Abe JA, Gai JG, Shimamoto YS. 2002. Diversity of chloroplast DNA SSRs in wild and cultivated soybeans: evidence for multiple origins of cultivated soybean. Theoretical and Applied Genetics 105: 645-653.
    • (2002) Theoretical and Applied Genetics , vol.105 , pp. 645-653
    • Xu, D.X.1    Abe, J.A.2    Gai, J.G.3    Shimamoto, Y.S.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.