-
1
-
-
34248550674
-
Effect of salinity changes on the bacterial diversity, photosynthesis and oxygen consumption of cyanobacterial mats from an intertidal flat of the Arabian Gulf
-
DOI 10.1111/j.1462-2920.2007.01254.x
-
Abed, R. M., Kohls, K., and de Beer, D. (2007) Effect of salinity changes on the bacterial diversity, photosynthesis and oxygen consumption of cyanobacterial mats from an intertidal flat of the Arabian Gulf. Environ Microbiol 9:1384-1392. (Pubitemid 46763517)
-
(2007)
Environmental Microbiology
, vol.9
, Issue.6
, pp. 1384-1392
-
-
Abed, R.M.M.1
Kohls, K.2
De Beer, D.3
-
2
-
-
79952390984
-
Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a colony-forming choanoflagellate
-
Alegado, R. A., Ferriera, S., Nusbaum, C., Young, S. K., Zeng, Q., Imamovic, A., Fairclough, S. R., and King, N. (2011) Complete genome sequence of Algoriphagus sp. PR1, bacterial prey of a colony-forming choanoflagellate. J Bacteriol 193:1485-1486.
-
(2011)
J Bacteriol
, vol.193
, pp. 1485-1486
-
-
Alegado, R.A.1
Ferriera, S.2
Nusbaum, C.3
Young, S.K.4
Zeng, Q.5
Imamovic, A.6
Fairclough, S.R.7
King, N.8
-
3
-
-
60149086349
-
Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay
-
Allen, M. A., Goh, F., Burns, B. P., and Neilan, B. A. (2009) Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay. Geobiology 7:82-96.
-
(2009)
Geobiology
, vol.7
, pp. 82-96
-
-
Allen, M.A.1
Goh, F.2
Burns, B.P.3
Neilan, B.A.4
-
4
-
-
33744970709
-
Stromatolite reef from the Early Archaean era of Australia
-
DOI 10.1038/nature04764, PII N04764
-
Allwood, A. C., Walter, M. R., Kamber, B. S., Marshall, C. P., and Burch, I. W. (2006) Stromatolite reef from the Early Archaean era of Australia. Nature 441:714-718. (Pubitemid 43865211)
-
(2006)
Nature
, vol.441
, Issue.7094
, pp. 714-718
-
-
Allwood, A.C.1
Walter, M.R.2
Kamber, B.S.3
Marshall, C.P.4
Burch, I.W.5
-
5
-
-
33748799671
-
New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras
-
DOI 10.1128/AEM.00556-06
-
Ashelford, K. E., Chuzhanova, N. A., Fry, J. C., Jones, A. J., and Weightman, A. J. (2006) New screening software shows that most recent large 16S rRNA gene clone libraries contain chimeras. Appl Environ Microbiol 72:5734-5741. (Pubitemid 44414595)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.9
, pp. 5734-5741
-
-
Ashelford, K.E.1
Chuzhanova, N.A.2
Fry, J.C.3
Jones, A.J.4
Weightman, A.J.5
-
6
-
-
34548415876
-
Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria
-
Audic, S., Robert, C., Campagna, B., Parinello, H., Claverie, J. M., Raoult, D., and Drancourt, M. (2007) Genome analysis of Minibacterium massiliensis highlights the convergent evolution of water-living bacteria. PLoS Genet 3:e138.
-
(2007)
PLoS Genet
, vol.3
-
-
Audic, S.1
Robert, C.2
Campagna, B.3
Parinello, H.4
Claverie, J.M.5
Raoult, D.6
Drancourt, M.7
-
7
-
-
0001961568
-
Ancient stromatolites and microbial mats
-
Y. Cohen, R. W. Castenholz, and H. O. Halvorson, Alan R. Liss, New York
-
Awramik, S. A. (1984) Ancient stromatolites and microbial mats. In Microbial Mats: Stromatolites, edited by Y. Cohen, R. W. Castenholz, and H. O. Halvorson, Alan R. Liss, New York, pp 1-22.
-
(1984)
Microbial Mats: Stromatolites
, pp. 1-22
-
-
Awramik, S.A.1
-
8
-
-
77956862183
-
Gunflint stromatolites: Microfossil distribution in relation to stromatolite morphology
-
M. R. Walter, Elsevier, Amsterdam
-
Awramik, W. S. (1976) Gunflint stromatolites: microfossil distribution in relation to stromatolite morphology. In Developments in Sedimentology, Vol. 20, edited by M. R. Walter, Elsevier, Amsterdam, pp 311-320.
-
(1976)
Developments in Sedimentology
, vol.20
, pp. 311-320
-
-
Awramik, W.S.1
-
9
-
-
70349678396
-
Microbial diversity in modern marine stromatolites, Highborne Cay, Bahamas
-
Baumgartner, L. K., Spear, J. R., Buckley, D. H., Pace, N. R., Reid, R. P., Dupraz, C., and Visscher, P. T. (2009) Microbial diversity in modern marine stromatolites, Highborne Cay, Bahamas. Environ Microbiol 11:2710-2719.
-
(2009)
Environ Microbiol
, vol.11
, pp. 2710-2719
-
-
Baumgartner, L.K.1
Spear, J.R.2
Buckley, D.H.3
Pace, N.R.4
Reid, R.P.5
Dupraz, C.6
Visscher, P.T.7
-
10
-
-
0013275364
-
Long-term manipulations of intact microbial mat communities in a greenhouse collaboratory: Simulating Earth's present and past field environments
-
Bebout, B. M., Carpenter, S. P., Des Marais, D. J., Discipulo, M., Embaye, T., Garcia-Pichel, F., Hoehler, T. M., Hogan, M., Jahnke, L. L., Keller, R. M., Miller, S. R., Prufert-Bebout, L. E., Raleigh, C., Rothrock, M., and Turk, K. (2002) Long-term manipulations of intact microbial mat communities in a greenhouse collaboratory: simulating Earth's present and past field environments. Astrobiology 2:383-402.
-
(2002)
Astrobiology
, vol.2
, pp. 383-402
-
-
Bebout, B.M.1
Carpenter, S.P.2
Das Marais, D.J.3
Discipulo, M.4
Embaye, T.5
Garcia-Pichel, F.6
Hoehler, T.M.7
Hogan, M.8
Jahnke, L.L.9
Keller, R.M.10
Miller, S.R.11
Prufert-Bebout, L.E.12
Raleigh, C.13
Rothrock, M.14
Turk, K.15
-
11
-
-
17144398587
-
Methane production by microbial mats under low sulphate concentrations
-
Bebout, B. M., Hoehler, T. M., Thamdrup, B., Albert, D., Carpenter, S. P., Hogan, M., Turk, K., and Des Marais, D. J. (2004) Methane production by microbial mats under low sulphate concentrations. Geobiology 2:87-96.
-
(2004)
Geobiology
, vol.2
, pp. 87-96
-
-
Bebout, B.M.1
Hoehler, T.M.2
Thamdrup, B.3
Albert, D.4
Carpenter, S.P.5
Hogan, M.6
Turk, K.7
Des Marais, D.J.8
-
12
-
-
46749150088
-
The tragedy of the uncommon: Understanding limitations in the analysis of microbial diversity
-
DOI 10.1038/ismej.2008.44, PII ISMEJ200844
-
Bent, S. J. and Forney, L. J. (2008) The tragedy of the uncommon: understanding limitations in the analysis of microbial diversity. ISME J 2:689-695. (Pubitemid 351951570)
-
(2008)
ISME Journal
, vol.2
, Issue.7
, pp. 689-695
-
-
Bent, S.J.1
Forney, L.J.2
-
13
-
-
39749159030
-
Genetic and morphological characterization of Rivularia and Calothrix (Nostocales, Cyanobacteria) from running water
-
DOI 10.1099/ijs.0.65273-0
-
Berrendero, E., Perona, E., and Mateo, P. (2008) Genetic and morphological characterization of Rivularia and Calothrix (Nostocales, Cyanobacteria) from running water. Int J Syst Evol Microbiol 58:447-460. (Pubitemid 351298423)
-
(2008)
International Journal of Systematic and Evolutionary Microbiology
, vol.58
, Issue.2
, pp. 447-460
-
-
Berrendero, E.1
Perona, E.2
Mateo, P.3
-
14
-
-
23144452801
-
GeneMark: Web software for gene finding in prokaryotes, eukaryotes and viruses
-
DOI 10.1093/nar/gki487
-
Besemer, J. and Borodovsky, M. (2005) GeneMark: web software for gene finding in prokaryotes, eukaryotes and viruses. Nucleic Acids Res 33:W451-W454. (Pubitemid 44529960)
-
(2005)
Nucleic Acids Research
, vol.33
-
-
Besemer, J.1
Borodovsky, M.2
-
15
-
-
36849028589
-
Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses
-
DOI 10.1038/ismej.2007.46, PII ISMEJ200746
-
Bhaya, D., Grossman, A. R., Steunou, A. S., Khuri, N., Cohan, F. M., Hamamura, N., Melendrez, M. C., Bateson, M. M., Ward, D. M., and Heidelberg, J. F. (2007) Population level functional diversity in a microbial community revealed by comparative genomic and metagenomic analyses. ISME J 1:703-713. (Pubitemid 350231339)
-
(2007)
ISME Journal
, vol.1
, Issue.8
, pp. 703-713
-
-
Bhaya, D.1
Grossman, A.R.2
Steunou, A.-S.3
Khuri, N.4
Cohan, F.M.5
Hamamura, N.6
Melendrez, M.C.7
Bateson, M.M.8
Ward, D.M.9
Heidelberg, J.F.10
-
16
-
-
0037046523
-
Ocean productivity before about 1.9 Gyr ago limited by phosphorus adsorption onto iron oxides
-
DOI 10.1038/417159a
-
Bjerrum, C. J. and Canfield, D. E. (2002) Ocean productivity before about 1.9 Gyr ago limited by phosphorus adsorption onto iron oxides. Nature 417:159-162. (Pubitemid 34506793)
-
(2002)
Nature
, vol.417
, Issue.6885
, pp. 159-162
-
-
Bjerrum, C.J.1
Canfield, D.E.2
-
17
-
-
73449136317
-
Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes
-
Bolhuis, H., Severin, I., Confurius-Guns, V., Wollenzien, U. I. A., and Stal, L. J. (2009) Horizontal transfer of the nitrogen fixation gene cluster in the cyanobacterium Microcoleus chthonoplastes. ISME J 4:121-130.
-
(2009)
ISME J
, vol.4
, pp. 121-130
-
-
Bolhuis, H.1
Severin, I.2
Confurius-Guns, V.3
Wollenzien, U.I.A.4
Stal, L.J.5
-
18
-
-
40949153547
-
Prokaryotic diversity of arctic ice shelf microbial mats
-
DOI 10.1111/j.1462-2920.2007.01516.x
-
Bottos, E. M., Vincent, W. F., Greer, C. W., and Whyte, L. G. (2008) Prokaryotic diversity of arctic ice shelf microbial mats. Environ Microbiol 10:950-966. (Pubitemid 351406094)
-
(2008)
Environmental Microbiology
, vol.10
, Issue.4
, pp. 950-966
-
-
Bottos, E.M.1
Vincent, W.F.2
Greer, C.W.3
Whyte, L.G.4
-
19
-
-
58149291858
-
Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico
-
Breitbart, M., Hoare, A., Nitti, A., Siefert, J., Haynes, M., Dinsdale, E., Edwards, R., Souza, V., Rohwer, F., and Hollander, D. (2009) Metagenomic and stable isotopic analyses of modern freshwater microbialites in Cuatro Ciénegas, Mexico. Environ Microbiol 11:16-34.
-
(2009)
Environ Microbiol
, vol.11
, pp. 16-34
-
-
Breitbart, M.1
Hoare, A.2
Nitti, A.3
Siefert, J.4
Haynes, M.5
Dinsdale, E.6
Edwards, R.7
Souza, V.8
Rohwer, F.9
Hollander, D.10
-
20
-
-
33749548848
-
Prokaryotic photosynthesis and phototrophy illuminated
-
DOI 10.1016/j.tim.2006.09.001, PII S0966842X06002265
-
Bryant, D. A. and Frigaard, N. U. (2006) Prokaryotic photosynthesis and phototrophy illuminated. Trends Microbiol 14:488-496. (Pubitemid 44537806)
-
(2006)
Trends in Microbiology
, vol.14
, Issue.11
, pp. 488-496
-
-
Bryant, D.A.1
Frigaard, N.-U.2
-
21
-
-
80052156440
-
Bacterial community assembly based on functional genes rather than species
-
Burke, C., Steinberg, P., Rusch, D., Kjelleberg, S., and Thomas, T. (2011) Bacterial community assembly based on functional genes rather than species. Proc Natl Acad Sci USA 108:14288-14293.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 14288-14293
-
-
Burke, C.1
Steinberg, P.2
Rusch, D.3
Kjelleberg, S.4
Thomas, T.5
-
22
-
-
4644335422
-
Microbial diversity of extant stromatolites in the hypersaline marine environment of Shark Bay, Australia
-
DOI 10.1111/j.1462-2920.2004.00651.x
-
Burns, B. P., Goh, F., Allen, M., and Neilan, B. A. (2004) Microbial diversity of extant stromatolites in the hypersaline marine environment of Shark Bay, Australia. Environ Microbiol 6:1096-1101. (Pubitemid 39275264)
-
(2004)
Environmental Microbiology
, vol.6
, Issue.10
, pp. 1096-1101
-
-
Burns, B.P.1
Goh, F.2
Allen, M.3
Neilan, B.A.4
-
23
-
-
0042071475
-
Effect of nitrogen and phosphorus additions on a benthic microbial mat from a hypersaline lake
-
Camacho, A. and de Wit, R. (2003) Effect of nitrogen and phosphorus additions on a benthic microbial mat from a hypersaline lake. Aquat Microb Ecol 32:261-273. (Pubitemid 36964823)
-
(2003)
Aquatic Microbial Ecology
, vol.32
, Issue.3
, pp. 261-273
-
-
Camacho, A.1
De Wit, R.2
-
24
-
-
0002527443
-
Photosynthesis in cyanobacterial mats and its relation to the sulfur cycle: A model for microbial sulfur interactions
-
Y. Cohen and E. Rosenberg, American Society for Microbiology, Washington DC
-
Cohen, Y. (1989) Photosynthesis in cyanobacterial mats and its relation to the sulfur cycle: a model for microbial sulfur interactions. In Microbial Mats: Physiological Ecology of Benthic Microbial Communities, edited by Y. Cohen and E. Rosenberg, American Society for Microbiology, Washington DC, pp 22-36.
-
(1989)
Microbial Mats: Physiological Ecology of Benthic Microbial Communities
, pp. 22-36
-
-
Cohen, Y.1
-
25
-
-
0017806329
-
Diversity in tropical rain forests and coral reefs
-
Connell, J. H. (1978) Diversity in tropical rain forests and coral reefs. Science 199:1302-1310.
-
(1978)
Science
, vol.199
, pp. 1302-1310
-
-
Connell, J.H.1
-
26
-
-
20244382279
-
Mathematical simulation of the diel O, S, and C biogeochemistry of a hypersaline microbial mat
-
DOI 10.1016/j.femsec.2004.12.005
-
Decker, K., Potter, C., Bebout, B. M., Des Marais, D. J., Carpenter, S., Discipulo, M., Hoehler, T. M., Miller, S. R., Thamdrup, B., Turk, K. A., and Visscher, P. T. (2005) Mathematical simulation of the diel O, S, and C biogeochemistry of a hypersaline microbial mat. FEMS Microbiol Ecol 52:377-395. (Pubitemid 40523634)
-
(2005)
FEMS Microbiology Ecology
, vol.52
, Issue.3
, pp. 377-395
-
-
Decker, K.L.M.1
Potter, C.S.2
Bebout, B.M.3
Des Marais, D.J.4
Carpenter, S.5
Discipulo, M.6
Hoehler, T.M.7
Miller, S.R.8
Thamdrup, B.9
Turk, K.A.10
Visscher, P.T.11
-
27
-
-
77954023290
-
Biofilms: The environmental playground of Legionella pneumophila
-
Declerck, P. (2010) Biofilms: the environmental playground of Legionella pneumophila. Environ Microbiol 12:557-566.
-
(2010)
Environ Microbiol
, vol.12
, pp. 557-566
-
-
Declerck, P.1
-
28
-
-
78650025969
-
Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T)
-
Del Rio, T. G., Abt, B., Spring, S., Lapidus, A., Nolan, M., Tice, H., Copeland, A., Cheng, J., Chen, F., Bruce, D., Goodwin, L., Pitluck, S., Ivanova, N., Mavromatis, K., Mikhailova, N., Pati, A., Chen, A., Palaniappan, K., Land, M., Hauser, L., Chang, Y., Jeffries, C., Chain, P., Saunders, E., Detter, J., Brettin, T., Rohde, M., Göker, M., Bristow, J., Eisen, J., Markowitz, V., Hugenholtz, P., Kyrpides, N., Klenk, H., and Lucas, S. (2010) Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034T). Stand Genomic Sci 2:87
-
(2010)
Stand Genomic Sci
, vol.2
, pp. 87
-
-
Del Rio, T.G.1
Abt, B.2
Spring, S.3
Lapidus, A.4
Nolan, M.5
Tice, H.6
Copeland, A.7
Cheng, J.8
Chen, F.9
Bruce, D.10
Goodwin, L.11
Pitluck, S.12
Ivanova, N.13
Mavromatis, K.14
Mikhailova, N.15
Pati, A.16
Chen, A.17
Palaniappan, K.18
Land, M.19
Hauser, L.20
Chang, Y.21
Jeffries, C.22
Chain, P.23
Saunders, E.24
Detter, J.25
Brettin, T.26
Rohde, M.27
Göker, M.28
Bristow, J.29
Eisen, J.30
Markowitz, V.31
Hugenholtz, P.32
Kyrpides, N.33
Klenk, H.34
Lucas, S.35
more..
-
29
-
-
0036616972
-
Remote sensing of planetary properties and biosignatures on extrasolar terrestrial planets
-
Des Marais, D. J., Harwit, M. O., Jucks, K. W., Kasting, J. F., Lin, D. N. C., Lunine, J. I., Schneider, J., Seager, S., Traub, W. A., and Woolf, N. J. (2002) Remote sensing of planetary properties and biosignatures on extrasolar terrestrial planets. Astrobiology 2:153-181.
-
(2002)
Astrobiology
, vol.2
, pp. 153-181
-
-
Des Marais, D.J.1
Harwit, M.O.2
Jucks, K.W.3
Kasting, J.F.4
Lin, D.N.C.5
Lunine, J.I.6
Schneider, J.7
Seager, S.8
Traub, W.A.9
Woolf, N.J.10
-
30
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DOI 10.1128/AEM.03006-05
-
DeSantis, T. Z., Hugenholtz, P., Larsen, N., Rojas, M., Brodie, E. L., Keller, K., Huber, T., Dalevi, D., Hu, P., and Andersen, G. L. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72:5069-5072. (Pubitemid 44078840)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.7
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
Rojas, M.4
Brodie, E.L.5
Keller, K.6
Huber, T.7
Dalevi, D.8
Hu, P.9
Andersen, G.L.10
-
31
-
-
61649103797
-
Spatial and temporal variability in a stratified hypersaline microbial mat community
-
Dillon, J. G., Miller, S., Bebout, B., Hullar, M., Pinel, N., and Stahl, D. A. (2009) Spatial and temporal variability in a stratified hypersaline microbial mat community. FEMS Microbiol Ecol 68:46-58.
-
(2009)
FEMS Microbiol Ecol
, vol.68
, pp. 46-58
-
-
Dillon, J.G.1
Miller, S.2
Bebout, B.3
Hullar, M.4
Pinel, N.5
Stahl, D.A.6
-
32
-
-
79959990784
-
Using biogenic sulfur gases as remotely detectable biosignatures on anoxic planets
-
Domagal-Goldman, S. D., Meadows, V. S., Claire, M. W., and Kasting, J. F. (2011) Using biogenic sulfur gases as remotely detectable biosignatures on anoxic planets. Astrobiology 11:419-441.
-
(2011)
Astrobiology
, vol.11
, pp. 419-441
-
-
Domagal-Goldman, S.D.1
Meadows, V.S.2
Claire, M.W.3
Kasting, J.F.4
-
33
-
-
79951812455
-
Phylogenetic and molecular clock inferences of cyanobacterial strains within Rivulariaceae from distant environments
-
Domínguez-Escobar, J., Beltrán, Y., Bergman, B., Díez, B., Ininbergs, K., Souza, V., and Falcón, L. I. (2011) Phylogenetic and molecular clock inferences of cyanobacterial strains within Rivulariaceae from distant environments. FEMS Microbiol Lett 316:90-99.
-
(2011)
FEMS Microbiol Lett
, vol.316
, pp. 90-99
-
-
Domínguez-Escobar, J.1
Beltrán, Y.2
Bergman, B.3
Díez, B.4
Ininbergs, K.5
Souza, V.6
Falcón, L.I.7
-
34
-
-
33644965921
-
Effects of phosphorus enrichment and grazing snails on modern stromatolitic microbial communities
-
DOI 10.1111/j.1365-2427.2005.01451.x
-
Elser, J. J., Schampel, J. H., Garcia-Pichel, F., Wade, B. D., Souza, V., Eguiarte, L., Escalante, A., and Farmer, J. D. (2005) Effects of phosphorus enrichment and grazing snails on modern stromatolitic microbial communities. Freshw Biol 50:1808-1825. (Pubitemid 43906866)
-
(2005)
Freshwater Biology
, vol.50
, Issue.11
, pp. 1808-1825
-
-
Elser, J.J.1
Schampel, J.H.2
Garcia-Pichel, F.3
Wade, B.D.4
Souza, V.5
Eguiarte, L.6
Escalante, A.7
Farmer, J.D.8
-
35
-
-
33644957308
-
Early Cambrian food webs on a trophic knife-edge? A hypothesis and preliminary data from a modern stromatolite-based ecosystem
-
Elser, J. J., Watts, J., Schampel, J. H., and Farmer, J. (2006) Early Cambrian food webs on a trophic knife-edge? A hypothesis and preliminary data from a modern stromatolite-based ecosystem. Ecological Letters 9:295-303.
-
(2006)
Ecological Letters
, vol.9
, pp. 295-303
-
-
Elser, J.J.1
Watts, J.2
Schampel, J.H.3
Farmer, J.4
-
36
-
-
0141592708
-
Bacterial diversity and sulfur cycling in a mesophilic sulfide-rich spring
-
DOI 10.1128/AEM.69.9.5609-5621.2003
-
Elshahed, M. S., Senko, J. M., Najar, F. Z., Kenton, S. M., Roe, B. A., Dewers, T. A., Spear, J. R., and Krumholz, L. R. (2003) Bacterial diversity and sulfur cycling in a mesophilic sulfide-rich spring. Appl Environ Microbiol 69:5609-5621. (Pubitemid 37150787)
-
(2003)
Applied and Environmental Microbiology
, vol.69
, Issue.9
, pp. 5609-5621
-
-
Elshahed, M.S.1
Senko, J.M.2
Najar, F.Z.3
Kenton, S.M.4
Roe, B.A.5
Dewers, T.A.6
Spear, J.R.7
Krumholz, L.R.8
-
37
-
-
0028172025
-
Investigation of an ironoxidizing microbial mat community located near Aarhus, Denmark: Field studies
-
Emerson, D. and Revsbech, N. P. (1994) Investigation of an ironoxidizing microbial mat community located near Aarhus, Denmark: field studies. Appl Environ Microbiol 60:4022-4031.
-
(1994)
Appl Environ Microbiol
, vol.60
, pp. 4022-4031
-
-
Emerson, D.1
Revsbech, N.P.2
-
38
-
-
45149118029
-
Diversity of aquatic prokaryotic communities in the Cuatro Cienegas basin
-
DOI 10.1111/j.1574-6941.2008.00496.x
-
Escalante, A. E., Eguiarte, L. E., Espinosa-Asuar, L., Forney, L. J., Noguez, A. M., and Souza-Saldivar, V. (2008) Diversity of aquatic prokaryotic communities in the Cuatro Cienegas basin. FEMS Microbiol Ecol 65:50-60. (Pubitemid 351832103)
-
(2008)
FEMS Microbiology Ecology
, vol.65
, Issue.1
, pp. 50-60
-
-
Escalante, A.E.1
Eguiarte, L.E.2
Espinosa-Asuar, L.3
Forney, L.J.4
Noguez, A.M.5
Souza Saldivar, V.6
-
39
-
-
67651099074
-
Pseudomonas cuatrocienegasensis sp. nov., isolated from an evaporating lagoon in the Cuatro Ciénegas valley in Coahuila, Mexico
-
Escalante, A. E., Caballero-Mellado, J., Martínez-Aguilar, L., Rodrýguez-Verdugo, A., González-González, A., Toribio-Jiménez, J., and Souza, V. (2009) Pseudomonas cuatrocienegasensis sp. nov., isolated from an evaporating lagoon in the Cuatro Ciénegas valley in Coahuila, Mexico. Int J Syst Evol Microbiol 59:1416-1420.
-
(2009)
Int J Syst Evol Microbiol
, vol.59
, pp. 1416-1420
-
-
Escalante, A.E.1
Caballero-Mellado, J.2
Martínez-Aguilar, L.3
Rodrýguez-Verdugo, A.4
González-González, A.5
Toribio-Jiménez, J.6
Souza, V.7
-
40
-
-
77956293867
-
Solubilization of inorganic phosphates and plant growth promotion by strains of Pseudomonas fluorescens isolated from acidic soils of Cameroon
-
Fankem, H., Ngo Nkot, L., Deubel, A., Quinn, J., Merbach, W., Etoa, F.-X., and Nwaga, D. (2008) Solubilization of inorganic phosphates and plant growth promotion by strains of Pseudomonas fluorescens isolated from acidic soils of Cameroon. Afr J Microbiol Res 2:171-178.
-
(2008)
Afr J Microbiol Res
, vol.2
, pp. 171-178
-
-
Fankem, H.1
Ngo Nkot, L.2
Deubel, A.3
Quinn, J.4
Merbach, W.5
Etoa, F.-X.6
Nwaga, D.7
-
41
-
-
84865473775
-
Past, present, and future: Microbial mats as models for astrobiological research
-
Springer, Dordrecht
-
Foster, J. S. and Mobberley, J. M. (2010) Past, present, and future: microbial mats as models for astrobiological research. In Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems, Springer, Dordrecht, pp 563-582.
-
(2010)
Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems
, pp. 563-582
-
-
Foster, J.S.1
Mobberley, J.M.2
-
42
-
-
0029786916
-
Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium
-
Garcia-Pichel, F., Prufert-Bebout, L., and Muyzer, G. (1996) Phenotypic and phylogenetic analyses show Microcoleus chthonoplastes to be a cosmopolitan cyanobacterium. Appl Environ Microbiol 62:3284-3291. (Pubitemid 26304115)
-
(1996)
Applied and Environmental Microbiology
, vol.62
, Issue.9
, pp. 3284-3291
-
-
Garcia-Pichel, F.1
Prufert-Bebout, L.2
Muyzer, G.3
-
43
-
-
0036070479
-
Jet-suspended, calcite-ballasted cyanobacterial waterwarts in a desert spring
-
DOI 10.1046/j.1529-8817.2002.t01-1-01178.x
-
Garcia-Pichel, F., Wade, B. D., and Farmer J. D. (2002) Jetsuspended, calcite-ballasted cyanobacterial waterwarts in a desert spring. J Phycol 38:420-428. (Pubitemid 34793765)
-
(2002)
Journal of Phycology
, vol.38
, Issue.3
, pp. 420-428
-
-
Garcia-Pichel, F.1
Wade, B.D.2
Farmer, J.D.3
-
45
-
-
23844446418
-
Genetics: Genome streamlining in a cosmopolitan oceanic bacterium
-
DOI 10.1126/science.1114057
-
Giovannoni, S. J., Tripp, H. J., Givan, S., Podar, M., Vergin, K. L., Baptista, D., Bibbs, L., Eads, J., Richardson, T. H., Noordewier, M., Rappé, M. S., Short, J. M., Carrington, J. C., and Mathur, E. J. (2005) Genome streamlining in a cosmopolitan oceanic bacterium. Science 309:1242-1245. (Pubitemid 41170917)
-
(2005)
Science
, vol.309
, Issue.5738
, pp. 1242-1245
-
-
Giovannoni, S.J.1
Tripp, H.J.2
Givan, S.3
Podar, M.4
Vergin, K.L.5
Baptista, D.6
Bibbs, L.7
Eads, J.8
Richardson, T.H.9
Noordewier, M.10
Rappe, M.S.11
Short, J.M.12
Carrington, J.C.13
Mathur, E.J.14
-
46
-
-
84555179645
-
Final four landing sites for the Mars Science Laboratory [abstract 1520]
-
Lunar and Planetary Institute, Houston
-
Golombek, M., Grant, J., Vasavada, A. R., Grotzinger, J., Watkins, M., Kipp, D., Noe Dobrea, E., Griffes, J., and Parker, T. (2011) Final four landing sites for the Mars Science Laboratory [abstract 1520]. In 42nd Lunar and Planetary Science Conference, Lunar and Planetary Institute, Houston.
-
(2011)
42nd Lunar and Planetary Science Conference
-
-
Golombek, M.1
Grant, J.2
Vasavada, A.R.3
Grotzinger, J.4
Watkins, M.5
Kipp, D.6
Noe Dobrea, E.7
Griffes, J.8
Parker, T.9
-
47
-
-
80555128720
-
Microbial hotspots in anchialine blue holes: Initial discoveries from the Bahamas
-
Gonzalez, B. C., Iliffe, T. M., Macalady, J. L., Schaperdoth, I., and Kakuk, B. (2011) Microbial hotspots in anchialine blue holes: initial discoveries from the Bahamas. Hydrobiologia 677:149-156.
-
(2011)
Hydrobiologia
, vol.677
, pp. 149-156
-
-
Gonzalez, B.C.1
Iliffe, T.M.2
Macalady, J.L.3
Schaperdoth, I.4
Kakuk, B.5
-
48
-
-
44449118067
-
Microbial biogeography: From taxonomy to traits
-
DOI 10.1126/science.1153475
-
Green, J. L., Bohannan, B. J. M., and Whitaker, R. J. (2008) Microbial biogeography: from taxonomy to traits. Science 320:1039-1043. (Pubitemid 351929519)
-
(2008)
Science
, vol.320
, Issue.5879
, pp. 1039-1043
-
-
Green, J.L.1
Bohannan, B.J.M.2
Whitaker, R.J.3
-
49
-
-
84864367596
-
Molecular investigations and experimental manipulations of microbial mats: A view to paleomicrobial ecosystems
-
J. Seckbach and A. Oren, Springer, Dordrecht
-
Green, S. J. and Jahnke, L. L. (2010) Molecular investigations and experimental manipulations of microbial mats: a view to paleomicrobial ecosystems. In Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems, edited by J. Seckbach and A. Oren, Springer, Dordrecht, pp 185-208.
-
(2010)
Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems
, pp. 185-208
-
-
Green, S.J.1
Jahnke, L.L.2
-
50
-
-
43449135602
-
A salinity and sulfate manipulation of hypersaline microbial mats reveals stasis in the cyanobacterial community structure
-
DOI 10.1038/ismej.2008.6, PII ISMEJ20086
-
Green, S. J., Blackford, C., Bucki, P., Jahnke, L. L., and Prufert-Bebout, L. (2008) A salinity and sulfate manipulation of hypersaline microbial mats reveals stasis in the cyanobacterial community structure. ISME J 2:457-470. (Pubitemid 351666966)
-
(2008)
ISME Journal
, vol.2
, Issue.5
, pp. 457-470
-
-
Green, S.J.1
Blackford, C.2
Bucki, P.3
Jahnke, L.L.4
Prufert-Bebout, L.5
-
51
-
-
36949060119
-
Competitive exclusion in herbaceous vegetation
-
Grime, J. P. (1973) Competitive exclusion in herbaceous vegetation. Nature 242:344-347.
-
(1973)
Nature
, vol.242
, pp. 344-347
-
-
Grime, J.P.1
-
52
-
-
0033377222
-
Stromatolites in Precambrian carbonates: Evolutionary mileposts or environmental dipsticks?
-
DOI 10.1146/annurev.earth.27.1.313
-
Grotzinger, J. P. and Knoll, A. H. (1999) Stromatolites in Precambrian carbonates: evolutionary mileposts or environmental dipsticks? Annu Rev Earth Planet Sci 27:313-358. (Pubitemid 30024338)
-
(1999)
Annual Review of Earth and Planetary Sciences
, vol.27
, pp. 313-358
-
-
Grotzinger, J.R.1
Knoll, A.H.2
-
53
-
-
0002051540
-
BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall, T. A. (1999) BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41:95-98.
-
(1999)
Nucleic Acids Symp Ser
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
54
-
-
33745292226
-
Biogeochemistry of microbial mats under Precambrian environmental conditions: A modelling study
-
DOI 10.1111/j.1472-4669.2005.00048.x
-
Herman, E. and Kump, L. (2005) Biogeochemistry of microbial mats under Precambrian environmental conditions: a modelling study. Geobiology 3:77-92. (Pubitemid 43934444)
-
(2005)
Geobiology
, vol.3
, Issue.2
, pp. 77-92
-
-
Herman, E.K.1
Kump, L.R.2
-
55
-
-
0035913370
-
The role of microbial mats in the production of reduced gases on the early Earth
-
DOI 10.1038/35085554
-
Hoehler, T. M., Bebout, B. M., and Des Marais, D. J. (2001) The role of microbial mats in the production of reduced gases on the early Earth. Nature 412:324-327. (Pubitemid 32691844)
-
(2001)
Nature
, vol.412
, Issue.6844
, pp. 324-327
-
-
Hoehler, T.M.1
Bebout, B.M.2
Des Marais, D.J.3
-
56
-
-
65549160988
-
Identification of ribosomal RNA genes in metagenomic fragments
-
Huang, Y., Gilna, P., and Li, W. (2009) Identification of ribosomal RNA genes in metagenomic fragments. Bioinformatics 25:1338-1340.
-
(2009)
Bioinformatics
, vol.25
, pp. 1338-1340
-
-
Huang, Y.1
Gilna, P.2
Li, W.3
-
57
-
-
33847702910
-
MEGAN analysis of metagenomic data
-
DOI 10.1101/gr.5969107
-
Huson, D. H., Auch, A. F., Qi, J., and Schuster, S. C. (2007) MEGAN analysis of metagenomic data. Genome Res 17:377-386. (Pubitemid 46376747)
-
(2007)
Genome Research
, vol.17
, Issue.3
, pp. 377-386
-
-
Huson, D.H.1
Auch, A.F.2
Qi, J.3
Schuster, S.C.4
-
58
-
-
78149423315
-
Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function
-
Inskeep, W. P., Rusch, D. B., Jay, Z. J., Herrgard, M. J., Kozubal, M. A., Richardson, T. H., Macur, R. E., Hamamura, N., Jennings, R. D., Fouke, B. W., Reysenbach, A.-L., Roberto, F., Young, M., Schwartz, A., Boyd, E. S., Badger, J. H., Mathur, E. J., Ortmann, A. C., Bateson, M., Geesey, G., Frazier, M., and Rodriguez-Valera, F. (2010) Metagenomes from high-temperature chemotrophic systems reveal geochemical controls on microbial community structure and function. PLoS One 5:e9773.
-
(2010)
PLoS One
, vol.5
-
-
Inskeep, W.P.1
Rusch, D.B.2
Jay, Z.J.3
Herrgard, M.J.4
Kozubal, M.A.5
Richardson, T.H.6
Macur, R.E.7
Hamamura, N.8
Jennings, R.D.9
Fouke, B.W.10
Reysenbach, A.-L.11
Roberto, F.12
Young, M.13
Schwartz, A.14
Boyd, E.S.15
Badger, J.H.16
Mathur, E.J.17
Ortmann, A.C.18
Bateson, M.19
Geesey, G.20
Frazier, M.21
Rodriguez-Valera, F.22
more..
-
59
-
-
0000795962
-
Transition from anoxygenic to oxygenic photosynthesis in a Microcoleus chthonoplastes cyanobacterial mat
-
Jorgensen, B. B., Cohen, Y., and Revsbech, N. P. (1986) Transition from anoxygenic to oxygenic photosynthesis in a Microcoleus chthonoplastes cyanobacterial mat. Appl Environ Microbiol 51:408-417.
-
(1986)
Appl Environ Microbiol
, vol.51
, pp. 408-417
-
-
Jorgensen, B.B.1
Cohen, Y.2
Revsbech, N.P.3
-
60
-
-
0035800517
-
Earth history: The rise of atmospheric oxygen
-
DOI 10.1126/science.1063811
-
Kasting, J. F. (2001) Earth history. The rise of atmospheric oxygen. Science 293:819-820. (Pubitemid 32743965)
-
(2001)
Science
, vol.293
, Issue.5531
, pp. 819-820
-
-
Kasting, J.F.1
-
61
-
-
77953506415
-
Phosphorus solubilizing bacteria: Occurrence, mechanisms and their role in crop production
-
Khan, A., Jilani, G., Akhtar, M. S., Naqvi, S. M. S., and Rasheed, M. (2009) Phosphorus solubilizing bacteria: occurrence, mechanisms and their role in crop production. J Agric Biol Sci 1:48-58.
-
(2009)
J Agric Biol Sci
, vol.1
, pp. 48-58
-
-
Khan, A.1
Jilani, G.2
Akhtar, M.S.3
Naqvi, S.M.S.4
Rasheed, M.5
-
62
-
-
77956844804
-
Pronounced effect of the nature of the inoculum on biofilm development in flow systems
-
Kroukamp, O., Dumitrache, R. G., and Wolfaardt, G. M. (2010) Pronounced effect of the nature of the inoculum on biofilm development in flow systems. Appl Environ Microbiol 76:6025-6031.
-
(2010)
Appl Environ Microbiol
, vol.76
, pp. 6025-6031
-
-
Kroukamp, O.1
Dumitrache, R.G.2
Wolfaardt, G.M.3
-
63
-
-
84986772879
-
Solar Lake (Sinai). 4. Stromatolitic cyanobacterial mats
-
Krumbein, W. E., Cohen, Y., and Shilo, M. (1977) Solar Lake (Sinai). 4. Stromatolitic cyanobacterial mats. Limnol Oceanogr 22:635-656.
-
(1977)
Limnol Oceanogr
, vol.22
, pp. 635-656
-
-
Krumbein, W.E.1
Cohen, Y.2
Shilo, M.3
-
64
-
-
44649171625
-
Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat
-
Kunin, V., Raes, J., Harris, J. K., Spear, J. R., Walker, J. J., Ivanova, N., von Mering, C., Bebout, B. M., Pace, N. R., Bork, P., and Hugenholtz, P. (2008) Millimeter-scale genetic gradients and community-level molecular convergence in a hypersaline microbial mat. Mol Syst Biol 4:198.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 198
-
-
Kunin, V.1
Raes, J.2
Harris, J.K.3
Spear, J.R.4
Walker, J.J.5
Ivanova, N.6
Von Mering, C.7
Bebout, B.M.8
Pace, N.R.9
Bork, P.10
Hugenholtz, P.11
-
65
-
-
70349458100
-
The genomic basis of trophic strategy in marine bacteria
-
Lauro, F. M., McDougald, D., Thomas, T., Williams, T. J., Egan, S., Rice, S., DeMaere, M. Z., Ting, L., Ertan, H., Johnson, J., Ferriera, S., Lapidus, A., Anderson, I., Kyrpides, N., Munk, A. C., Detter, C., Han, C. S., Brown, M. V., Robb, F. T., Kjelleberg, S., and Cavicchioli, R. (2009) The genomic basis of trophic strategy in marine bacteria. Proc Natl Acad Sci USA 106:15527-15533.
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 15527-15533
-
-
Lauro, F.M.1
McDougald, D.2
Thomas, T.3
Williams, T.J.4
Egan, S.5
Rice, S.6
DeMaere, M.Z.7
Ting, L.8
Ertan, H.9
Johnson, J.10
Ferriera, S.11
Lapidus, A.12
Anderson, I.13
Kyrpides, N.14
Munk, A.C.15
Detter, C.16
Han, C.S.17
Brown, M.V.18
Robb, F.T.19
Kjelleberg, S.20
Cavicchioli, R.21
more..
-
66
-
-
79960004119
-
Interactive Tree Of Life v2: Online annotation and display of phylogenetic trees made easy
-
Letunic, I. and Bork, P. (2011) Interactive Tree Of Life v2: online annotation and display of phylogenetic trees made easy. Nucleic Acids Res 39:W475-W478.
-
(2011)
Nucleic Acids Res
, vol.39
-
-
Letunic, I.1
Bork, P.2
-
67
-
-
33646584137
-
Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat
-
DOI 10.1128/AEM.72.5.3685-3695.2006
-
Ley, R. E., Harris, J. K., Wilcox, J., Spear, J. R, Miller, S. R., Bebout, B. M., Maresca, J. A., Bryant, D. A., and Sogin, M. L. (2006) Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat. Appl Environ Microbiol 72:3685-3695. (Pubitemid 43728026)
-
(2006)
Applied and Environmental Microbiology
, vol.72
, Issue.5
, pp. 3685-3695
-
-
Ley, R.E.1
Harris, J.K.2
Wilcox, J.3
Spear, J.R.4
Miller, S.R.5
Bebout, B.M.6
Maresca, J.A.7
Bryant, D.A.8
Sogin, M.L.9
Pace, N.R.10
-
68
-
-
71749111168
-
Analysis and comparison of very large metagenomes with fast clustering and functional annotation
-
Li, W. (2009) Analysis and comparison of very large metagenomes with fast clustering and functional annotation. BMC Bioinformatics 10:359.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 359
-
-
Li, W.1
-
69
-
-
33745634395
-
Cd-hit: A fast program for clustering and comparing large sets of protein or nucleotide sequences
-
DOI 10.1093/bioinformatics/btl158
-
Li, W. and Godzik, A. (2006) Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22:1658-1659. (Pubitemid 43985301)
-
(2006)
Bioinformatics
, vol.22
, Issue.13
, pp. 1658-1659
-
-
Li, W.1
Godzik, A.2
-
70
-
-
2542523843
-
ARB: A software environment for sequence data
-
DOI 10.1093/nar/gkh293
-
Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Yadhukumar, Buchner, A., Lai, T., Steppi, S., Jobb, G., Förster, W., Brettske, I., Gerber, S., Ginhart, A. W., Gross, O., Grumann, S., Hermann, S., Jost, R., König, A., Liss, T., Lüssmann, R., May, M., Nonhoff, B., Reichel, B., Strehlow, R., Stamatakis, A., Stuckmann, N., Vilbig, A., Lenke, M., Ludwig, T., Bode, A., and Schleifer, K. H. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32:1363-1371. (Pubitemid 38854737)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.4
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Yadhukumar, A.6
Buchner, A.7
Lai, T.8
Steppi, S.9
Jacob, G.10
Forster, W.11
Brettske, I.12
Gerber, S.13
Ginhart, A.W.14
Gross, O.15
Grumann, S.16
Hermann, S.17
Jost, R.18
Konig, A.19
Liss, T.20
Lussbmann, R.21
May, M.22
Nonhoff, B.23
Reichel, B.24
Strehlow, R.25
Stamatakis, A.26
Stuckmann, N.27
Vilbig, A.28
Lenke, M.29
Ludwig, T.30
Bode, A.31
Schleifer, K.-H.32
more..
-
71
-
-
75549083619
-
The integrated microbial genomes system: An expanding comparative analysis resource
-
Markowitz, V. M., Chen, I.-M., Palaniappan, K., Chu, K., Szeto, E., Grechkin, Y., Ratner, A., Anderson, I., Lykidis, A., Mavromatis, K., Ivanova, N. N., and Kyrpides, N. C. (2009) The integrated microbial genomes system: an expanding comparative analysis resource. Nucleic Acids Res 38:D382-D390.
-
(2009)
Nucleic Acids Res
, vol.38
-
-
Markowitz, V.M.1
Chen, I.-M.2
Palaniappan, K.3
Chu, K.4
Szeto, E.5
Grechkin, Y.6
Ratner, A.7
Anderson, I.8
Lykidis, A.9
Mavromatis, K.10
Ivanova, N.N.11
Kyrpides, N.C.12
-
72
-
-
53549118607
-
The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes
-
Meyer, F., Paarmann, D., D'Souza, M., Olson, R., Glass, E. M., Kubal, M., Paczian, T., Rodriguez, A., Stevens, R., Wilke, A., Wilkening, J., and Edwards, R. A. (2008) The metagenomics RAST server-a public resource for the automatic phylogenetic and functional analysis of metagenomes. BMC Bioinformatics 9:386.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 386
-
-
Meyer, F.1
Paarmann, D.2
D'Souza, M.3
Olson, R.4
Glass, E.M.5
Kubal, M.6
Paczian, T.7
Rodriguez, A.8
Stevens, R.9
Wilke, A.10
Wilkening, J.11
Edwards, R.A.12
-
73
-
-
79961170598
-
Hydrothermal ecotones and streamer biofilm communities in the Lower Geyser Basin, Yellowstone National Park
-
Meyer-Dombard, D. R., Swingley, W., Raymond, J., Havig, J., Shock, E. L., and Summons, R. E. (2011) Hydrothermal ecotones and streamer biofilm communities in the Lower Geyser Basin, Yellowstone National Park. Environ Microbiol 13:2216-2231.
-
(2011)
Environ Microbiol
, vol.13
, pp. 2216-2231
-
-
Meyer-Dombard, D.R.1
Swingley, W.2
Raymond, J.3
Havig, J.4
Shock, E.L.5
Summons, R.E.6
-
74
-
-
20444365770
-
Characterization of microbial community structure in Gulf of Mexico gas hydrates: Comparative analysis of DNA- and RNA-derived clone libraries
-
DOI 10.1128/AEM.71.6.3235-3247.2005
-
Mills, H. J., Martinez, R. J., Story, S., and Sobecky, P. A. (2005) Characterization of microbial community structure in Gulf of Mexico gas hydrates: comparative analysis of DNAand RNA-derived clone libraries. Appl Environ Microbiol 71:3235-3247. (Pubitemid 40807235)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.6
, pp. 3235-3247
-
-
Mills, H.J.1
Martinez, R.J.2
Story, S.3
Sobecky, P.A.4
-
75
-
-
0008916226
-
Preliminary limnologic information on waters of the Cuatro Cienegas basin, Coahuila, Mexico
-
Minckley, W. L. and Cole, G. A. (1968) Preliminary limnologic information on waters of the Cuatro Cienegas basin, Coahuila, Mexico. Southwest Nat 13:421-431.
-
(1968)
Southwest Nat
, vol.13
, pp. 421-431
-
-
Minckley, W.L.1
Cole, G.A.2
-
76
-
-
55449109855
-
Nonmedical pseudomonas
-
M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. Stackebrandt, Springer, New York
-
Moore, E. R. B., Tindall, B. J., Martins Dos Santos, V., Pieper, D. H., Ramos, J. L., and Palleroni, N. J. (2006) Nonmedical pseudomonas. In The Prokaryotes, Vol. 6, edited by M. Dworkin, S. Falkow, E. Rosenberg, K.-H. Schleifer, and E. Stackebrandt, Springer, New York, pp 646-703.
-
(2006)
The Prokaryotes
, vol.6
, pp. 646-703
-
-
Moore, E.R.B.1
Tindall, B.J.2
Martins Dos Santos, V.3
Pieper, D.H.4
Ramos, J.L.5
Palleroni, N.J.6
-
77
-
-
77955516907
-
DNA sequence-based analysis of the Pseudomonas species
-
Mulet, M., Lalucat, J., and García-Valdés, E. (2010) DNA sequence-based analysis of the Pseudomonas species. Environ Microbiol 12:1513-1530.
-
(2010)
Environ Microbiol
, vol.12
, pp. 1513-1530
-
-
Mulet, M.1
Lalucat, J.2
García-Valdés, E.3
-
78
-
-
34548688408
-
Insights into the genome of large sulfur bacteria revealed by analysis of single filaments
-
Mussmann, M., Hu, F. Z., Richter, M., de Beer, D., Preisler, A., Jørgensen, B. B., Huntemann, M., Glöckner, F. O., Amann, R., Koopman, W. J., Lasken, R. S., Janto, B., Hogg, J., Stoodley, P., Boissy, R., and Ehrlich, G. D. (2007) Insights into the genome of large sulfur bacteria revealed by analysis of single filaments. PLoS Biol 5:e230.
-
(2007)
PLoS Biol
, vol.5
-
-
Mussmann, M.1
Hu, F.Z.2
Richter, M.3
De Beer, D.4
Preisler, A.5
Jørgensen, B.B.6
Huntemann, M.7
Glöckner, F.O.8
Amann, R.9
Koopman, W.J.10
Lasken, R.S.11
Janto, B.12
Hogg, J.13
Stoodley, P.14
Boissy, R.15
Ehrlich, G.D.16
-
79
-
-
43849095105
-
The ecology and biotechnology of sulphate-reducing bacteria
-
DOI 10.1038/nrmicro1892, PII NRMICRO1892
-
Muyzer, G. and Stams, A. J. M. (2008) The ecology and biotechnology of sulphate-reducing bacteria. Nat Rev Microbiol 6:441-454. (Pubitemid 351696438)
-
(2008)
Nature Reviews Microbiology
, vol.6
, Issue.6
, pp. 441-454
-
-
Muyzer, G.1
Stams, A.J.M.2
-
80
-
-
84865488137
-
Spatially resolved genomic, stable isotopic, and lipid analyses of a modern freshwater microbialite from Cuatro Ciénegas, Mexico
-
Nitti, A., Daniels, C. A., Siefert, J., Souza, V., Hollander, D., and Breitbart, M. (2012) Spatially resolved genomic, stable isotopic, and lipid analyses of a modern freshwater microbialite from Cuatro Ciénegas, Mexico. Astrobiology 12:685-698.
-
(2012)
Astrobiology
, vol.12
, pp. 685-698
-
-
Nitti, A.1
Daniels, C.A.2
Siefert, J.3
Souza, V.4
Hollander, D.5
Breitbart, M.6
-
81
-
-
0000718912
-
Microbes and black shales
-
R. E. Riding and S. M. Awramik, Springer Verlag, Berlin
-
Oschmann, W. (2000) Microbes and black shales. In Microbial Sediments, edited by R. E. Riding and S. M. Awramik, Springer Verlag, Berlin, pp 137-148.
-
(2000)
Microbial Sediments
, pp. 137-148
-
-
Oschmann, W.1
-
82
-
-
79956314138
-
Environmental dynamics, community structure and function in a hypersaline microbial mat
-
J. Seckbach and A. Oren, Springer, Dordrecht
-
Paerl, H. W. and Yannarell, A. C. (2010) Environmental dynamics, community structure and function in a hypersaline microbial mat. In Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems, edited by J. Seckbach and A. Oren, Springer, Dordrecht, pp 423-444.
-
(2010)
Microbial Mats: Modern and Ancient Microorganisms in Stratified Systems
, pp. 423-444
-
-
Paerl, H.W.1
Yannarell, A.C.2
-
83
-
-
0037363439
-
Hypersaline cyanobacterial mats as indicators of elevated tropical hurricane activity and associated climate change
-
Paerl, H. W., Steppe, T. F., Buchan, K. C., and Potts, M. (2003) Hypersaline cyanobacterial mats as indicators of elevated tropical hurricane activity and associated climate change. AMBIO: A Journal of the Human Environment 32:87-90. (Pubitemid 36439955)
-
(2003)
Ambio
, vol.32
, Issue.2
, pp. 87-90
-
-
Paerl, H.W.1
Steppe, T.F.2
Buchan, K.C.3
Potts, M.4
-
84
-
-
77951280888
-
Global biogeochemical changes at both ends of the proterozoic: Insights from phosphorites
-
Papineau, D. (2010) Global biogeochemical changes at both ends of the proterozoic: insights from phosphorites. Astrobiology 10:165-181.
-
(2010)
Astrobiology
, vol.10
, pp. 165-181
-
-
Papineau, D.1
-
85
-
-
23744506517
-
Composition and structure of microbial communities from stromatolites of Hamelin Pool in Shark Bay, Western Australia
-
DOI 10.1128/AEM.71.8.4822-4832.2005
-
Papineau, D., Walker, J. J., Mojzsis, S. J., and Pace, N. R. (2005) Composition and structure of microbial communities from stromatolites of Hamelin Pool in Shark Bay, Western Australia. Appl Environ Microbiol 71:4822-4832. (Pubitemid 41129541)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.8
, pp. 4822-4832
-
-
Papineau, D.1
Walker, J.J.2
Mojzsis, S.J.3
Pace, N.R.4
-
86
-
-
84865463012
-
Comparative metagenomics of two microbial mats at Cuatro Ciénegas Basin I: Ancient lessons on how to cope with an environment under severe nutrient stress
-
Peimbert, M., Alcaraz, L. D., Bonilla-Rosso, G., Olmedo-Alvarez, G., García-Oliva, F., Segovia, L., Eguiarte, L. E., and Souza, V. (2012) Comparative metagenomics of two microbial mats at Cuatro Ciénegas Basin I: ancient lessons on how to cope with an environment under severe nutrient stress. Astrobiology 12:648-658.
-
(2012)
Astrobiology
, vol.12
, pp. 648-658
-
-
Peimbert, M.1
Alcaraz, L.D.2
Bonilla-Rosso, G.3
Olmedo-Alvarez, G.4
García-Oliva, F.5
Segovia, L.6
Eguiarte, L.E.7
Souza, V.8
-
87
-
-
77953619002
-
The ecological coherence of high bacterial taxonomic ranks
-
Philippot, L., Andersson, S. G. E., Battin, T. J., Prosser, J. I., Schimel, J. P., Whitman, W. B., and Hallin, S. (2010) The ecological coherence of high bacterial taxonomic ranks. Nat Rev Microbiol 8:523-529.
-
(2010)
Nat Rev Microbiol
, vol.8
, pp. 523-529
-
-
Philippot, L.1
Andersson, S.G.E.2
Battin, T.J.3
Prosser, J.I.4
Schimel, J.P.5
Whitman, W.B.6
Hallin, S.7
-
88
-
-
78049363189
-
The evolution of the marine phosphate reservoir
-
Planavsky, N. J., Rouxel, O. J., Bekker, A., Lalonde, S. V., Konhauser, K. O., Reinhard, C. T., and Lyons, T. W. (2010) The evolution of the marine phosphate reservoir. Nature 467:1088-1090.
-
(2010)
Nature
, vol.467
, pp. 1088-1090
-
-
Planavsky, N.J.1
Rouxel, O.J.2
Bekker, A.3
Lalonde, S.V.4
Konhauser, K.O.5
Reinhard, C.T.6
Lyons, T.W.7
-
89
-
-
0025171672
-
Anaerobic degradation of acetone by Desulfococcus biacutus spec. nov
-
Platen, H., Temmes, A., and Schink, B. (1990) Anaerobic degradation of acetone by Desulfococcus biacutus spec. nov. Arch Microbiol 154:355-361. (Pubitemid 20292571)
-
(1990)
Archives of Microbiology
, vol.154
, Issue.4
, pp. 355-361
-
-
Platen, H.1
Temmes, A.2
Schink, B.3
-
91
-
-
0032474853
-
Adaptive radiation in a heterogeneous environment
-
DOI 10.1038/27900
-
Rainey, P. B. and Travisano, M. (1998) Adaptive radiation in a heterogeneous environment. Nature 394:69-72. (Pubitemid 28321802)
-
(1998)
Nature
, vol.394
, Issue.6688
, pp. 69-72
-
-
Rainey, P.B.1
Travisano, M.2
-
92
-
-
49849087441
-
A two-step electrodialysis method for DNA purification from polluted metallic environmental samples
-
Rodríguez-Mejía, J. L., Martinez-Anaya, C., Folch-Mallol, J. L., and Dantán-González, E. (2008) A two-step electrodialysis method for DNA purification from polluted metallic environmental samples. Electrophoresis 29:3239-3244.
-
(2008)
Electrophoresis
, vol.29
, pp. 3239-3244
-
-
Rodríguez-Mejía, J.L.1
Martinez-Anaya, C.2
Folch-Mallol, J.L.3
Dantán-González, E.4
-
93
-
-
54949113271
-
Comparative molecular analysis of endoevaporitic microbial communities
-
Sahl, J. W., Pace, N. R., and Spear, J. R. (2008) Comparative molecular analysis of endoevaporitic microbial communities. Appl Environ Microbiol 74:6444-6446.
-
(2008)
Appl Environ Microbiol
, vol.74
, pp. 6444-6446
-
-
Sahl, J.W.1
Pace, N.R.2
Spear, J.R.3
-
95
-
-
72949107142
-
Introducing mothur: Opensource, platform-independent, community-supported software for describing and comparing microbial communities
-
Schloss, P. D., Westcott, S. L., Ryabin, T., Hall, J. R., Hartmann, M., Hollister, E. B., Lesniewski, R. A., Oakley, B. B., Parks, D. H., Robinson, C. J., Sahl, J. W., Stres, B., Thallinger, G. G., Van Horn, D. J., and Weber, C. F. (2009) Introducing mothur: opensource, platform-independent, community-supported software for describing and comparing microbial communities. Appl Environ Microbiol 75:7537-7541.
-
(2009)
Appl Environ Microbiol
, vol.75
, pp. 7537-7541
-
-
Schloss, P.D.1
Westcott, S.L.2
Ryabin, T.3
Hall, J.R.4
Hartmann, M.5
Hollister, E.B.6
Lesniewski, R.A.7
Oakley, B.B.8
Parks, D.H.9
Robinson, C.J.10
Sahl, J.W.11
Stres, B.12
Thallinger, G.G.13
Van Horn, D.J.14
Weber, C.F.15
-
96
-
-
21444443311
-
Vegetation's red edge: A possible spectroscopic biosignature of extraterrestrial plants
-
DOI 10.1089/ast.2005.5.372
-
Seager, S., Turner, E. L., Schafer, J., and Ford, E. B. (2005) Vegetation's red edge: a possible spectroscopic biosignature of extraterrestrial plants. Astrobiology 5:372-390. (Pubitemid 40919371)
-
(2005)
Astrobiology
, vol.5
, Issue.3
, pp. 372-390
-
-
Seager, S.1
Turner, E.L.2
Schafer, J.3
Ford, E.B.4
-
97
-
-
67649653746
-
Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens
-
Silby, M. W., Cerdeño-Tárraga, A. M., Vernikos, G. S., Giddens, S. R., Jackson, R. W., Preston, G. M., Zhang, X. X., Moon, C. D., Gehrig, S. M., Godfrey, S. A., Knight, C. G., Malone, J. G., Robinson, Z., Spiers, A. J., Harris, S., Challis, G. L., Yaxley, A. M., Harris, D., Seeger, K., Murphy, L., Rutter, S., Squares, R., Quail, M. A., Saunders, E., Mavromatis, K., Brettin, T. S., Bentley, S. D., Hothersall, J., Stephens, E., Thomas, C. M., Parkhill, J., Levy, S. B., Rainey, P. B., and Thomson, N. R. (2009) Genomic and genetic analyses of diversity and plant interactions of Pseudomonas fluorescens. Genome Biol 10:R51.
-
(2009)
Genome Biol
, vol.10
-
-
Silby, M.W.1
Cerdeño-Tárraga, A.M.2
Vernikos, G.S.3
Giddens, S.R.4
Jackson, R.W.5
Preston, G.M.6
Zhang, X.X.7
Moon, C.D.8
Gehrig, S.M.9
Godfrey, S.A.10
Knight, C.G.11
Malone, J.G.12
Robinson, Z.13
Spiers, A.J.14
Harris, S.15
Challis, G.L.16
Yaxley, A.M.17
Harris, D.18
Seeger, K.19
Murphy, L.20
Rutter, S.21
Squares, R.22
Quail, M.A.23
Saunders, E.24
Mavromatis, K.25
Brettin, T.S.26
Bentley, S.D.27
Hothersall, J.28
Stephens, E.29
Thomas, C.M.30
Parkhill, J.31
Levy, S.B.32
Rainey, P.B.33
Thomson, N.R.34
more..
-
98
-
-
32044445998
-
Community composition of a hypersaline endoevaporitic microbial mat
-
DOI 10.1128/AEM.71.11.7352-7365.2005
-
Sørensen, K. B., Canfield, D. E., Teske, A. P., and Oren, A. (2005) Community composition of a hypersaline endoevaporitic microbial mat. Appl Environ Microbiol 71:7352-7365. (Pubitemid 43194230)
-
(2005)
Applied and Environmental Microbiology
, vol.71
, Issue.11
, pp. 7352-7365
-
-
Sorensen, K.B.1
Canfield, D.E.2
Teske, A.P.3
Oren, A.4
-
99
-
-
33646228171
-
An endangered oasis of aquatic microbial biodiversity in the Chihuahuan desert
-
Souza, V., Espinosa-Asuar, L., Escalante, A. E., Eguiarte, L. E., Farmer, J., Forney, L., Lloret, L., Rodríguez-Martínez, J. M., Soberón, X., Dirzo, R., and Elser, J. J. (2006) An endangered oasis of aquatic microbial biodiversity in the Chihuahuan desert. Proc Natl Acad Sci USA 103:6565-6570.
-
(2006)
Proc Natl Acad Sci USA
, vol.103
, pp. 6565-6570
-
-
Souza, V.1
Espinosa-Asuar, L.2
Escalante, A.E.3
Eguiarte, L.E.4
Farmer, J.5
Forney, L.6
Lloret, L.7
Rodríguez-Martínez, J.M.8
Soberón, X.9
Dirzo, R.10
Elser, J.J.11
-
100
-
-
0037399106
-
Complexity in natural microbial ecosystems: The Guerrero Negro experience
-
Spear, J. R., Ley, R. E., Berger, A. B., and Pace, N. R. (2003) Complexity in natural microbial ecosystems: the Guerrero Negro experience. Biol Bull 204:168-173. (Pubitemid 36516703)
-
(2003)
Biological Bulletin
, vol.204
, Issue.2
, pp. 168-173
-
-
Spear, J.R.1
Ley, R.E.2
Berger, A.B.3
Pace, N.R.4
-
101
-
-
0001168763
-
The metabolic versatility of the mat-building cyanobacteria Microcoleus chthonoplastes and Oscillatoria limosa and its ecological significance
-
Stal, L. J. (1991) The metabolic versatility of the mat-building cyanobacteria Microcoleus chthonoplastes and Oscillatoria limosa and its ecological significance. Algological Studies/Archiv für Hydrobiologie 64:453-467.
-
(1991)
Algological Studies/Archiv für Hydrobiologie
, vol.64
, pp. 453-467
-
-
Stal, L.J.1
-
102
-
-
0000739525
-
Structure of microbial mats and biofilms
-
R. E. Riding and S. M. Awramik, Springer-Verlag, Berlin
-
Stolz, J. F. (2000) Structure of microbial mats and biofilms. In Microbial Sediments, edited by R. E. Riding and S. M. Awramik, Springer-Verlag, Berlin, pp 1-8.
-
(2000)
Microbial Sediments
, pp. 1-8
-
-
Stolz, J.F.1
-
103
-
-
77953960831
-
Origin of terrestrial gypsum dunes-implications for martian gypsum-rich dunes of Olympia Undae
-
Szynkiewicz, A., Ewing, R. C., Moore, C. H., Glamoclija, M., Bustos, D., and Pratt, L. M. (2010) Origin of terrestrial gypsum dunes-implications for martian gypsum-rich dunes of Olympia Undae. Geomorphology 121:69-83.
-
(2010)
Geomorphology
, vol.121
, pp. 69-83
-
-
Szynkiewicz, A.1
Ewing, R.C.2
Moore, C.H.3
Glamoclija, M.4
Bustos, D.5
Pratt, L.M.6
-
104
-
-
0025243140
-
Constraints and tradeoffs: Toward a predictive theory of competition and succession
-
Tilman, D. (1990) Constraints and tradeoffs: toward a predictive theory of competition and succession. Oikos 58:3-15. (Pubitemid 20429054)
-
(1990)
Oikos
, vol.58
, Issue.1
, pp. 3-15
-
-
Tilman, D.1
-
105
-
-
0020377104
-
Growth of Pseudomonas aeruginosa in tap water in relation to utilization of substrates at concentrations of a few micrograms per liter
-
van der Kooij, D., Oranje, J., and Hijnen, W. (1982) Growth of Pseudomonas aeruginosa in tap water in relation to utilization of substrates at concentrations of a few micrograms per liter. Appl Environ Microbiol 44:1086-1095. (Pubitemid 13218939)
-
(1982)
Applied and Environmental Microbiology
, vol.44
, Issue.5
, pp. 1086-1095
-
-
Van Der Kooij, D.1
Oranje, J.P.2
Hijnen, W.A.M.3
-
106
-
-
0027807971
-
Microbial mats: A joint venture
-
van Gemerden, H. (1993) Microbial mats: A joint venture. Mar. Geol 113:3-25. (Pubitemid 24393444)
-
(1993)
Marine Geology
, vol.113
, Issue.1-2
, pp. 3-25
-
-
Van Gemerden, H.1
-
107
-
-
77958065732
-
Metagenomic profiling of Arctic microbial mat communities as nutrient scavenging and recycling systems
-
Varin, T., Lovejoy, C., Jungblut, A. D., and Vincent, W. F. (2010) Metagenomic profiling of Arctic microbial mat communities as nutrient scavenging and recycling systems. Limnol Oceanogr 55:1901-1911.
-
(2010)
Limnol Oceanogr
, vol.55
, pp. 1901-1911
-
-
Varin, T.1
Lovejoy, C.2
Jungblut, A.D.3
Vincent, W.F.4
-
108
-
-
0002338528
-
Fungi and sediments
-
R. E. Riding and S. M. Awramik, Springer-Verlag, Berlin
-
Verrecchia, E. P. (2000) Fungi and sediments. In Microbial Sediments, edited by R. E. Riding and S. M. Awramik, Springer-Verlag, Berlin, pp 69-75.
-
(2000)
Microbial Sediments
, pp. 69-75
-
-
Verrecchia, E.P.1
-
109
-
-
69949184076
-
Organic acid production in vitro and plant growth promotion in maize under controlled environment by phosphate-solubilizing fluorescent Pseudomonas
-
Vyas, P. and Gulati, A. (2009) Organic acid production in vitro and plant growth promotion in maize under controlled environment by phosphate- solubilizing fluorescent Pseudomonas. BMC Microbiol 9:174.
-
(2009)
BMC Microbiol
, vol.9
, pp. 174
-
-
Vyas, P.1
Gulati, A.2
-
110
-
-
0031737291
-
Natural view of microbial biodiversity within hot spring cyanobacterial mat communities
-
Ward, D. M., Ferris, M. J., Nold, S. C., and Bateson, M. M. (1998) A natural view of microbial biodiversity within hot spring cyanobacterial mat communities. Microbiol Mol Biol Rev 62:1353-1370. (Pubitemid 28558302)
-
(1998)
Microbiology and Molecular Biology Reviews
, vol.62
, Issue.4
, pp. 1353-1370
-
-
Ward, D.M.1
Ferris, M.J.2
Nold, S.C.3
Bateson, M.M.4
-
111
-
-
70349470913
-
Carbon and nitrogen substrate utilization in the marine bacterium Sphingopyxis alaskensis strain RB2256
-
Williams, T. J., Ertan, H., Ting, L., and Cavicchioli, R. (2009) Carbon and nitrogen substrate utilization in the marine bacterium Sphingopyxis alaskensis strain RB2256. ISME J 3:1036-1052.
-
(2009)
ISME J
, vol.3
, pp. 1036-1052
-
-
Williams, T.J.1
Ertan, H.2
Ting, L.3
Cavicchioli, R.4
-
112
-
-
84880678887
-
Isolation and characterization of phosphate solubilizing bacteria from Chinese cabbage
-
Brisbane, Australia
-
Woo, S. M., Lee, M. K., Hong, I. S., Poonguzhali, S., and Sa, T. M. (2010) Isolation and characterization of phosphate solubilizing bacteria from Chinese cabbage. In Soil Solutions for a Changing World, Brisbane, Australia, pp 56-59.
-
(2010)
Soil Solutions for a Changing World
, pp. 56-59
-
-
Woo, S.M.1
Lee, M.K.2
Hong, I.S.3
Poonguzhali, S.4
Sa, T.M.5
-
113
-
-
55649110049
-
A simple, fast, and accurate method of phylogenomic inference
-
Wu, M. and Eisen, J. A. (2008) A simple, fast, and accurate method of phylogenomic inference. Genome Biol 9:R151.
-
(2008)
Genome Biol
, vol.9
-
-
Wu, M.1
Eisen, J.A.2
-
114
-
-
33846998983
-
Disturbance and recovery of microbial community structure and function following Hurricane Frances
-
Yannarell, A. C., Steppe, T. F., and Paerl, H. W. (2007) Disturbance and recovery of microbial community structure and function following Hurricane Frances. Environ Microbiol 9:576-583.
-
(2007)
Environ Microbiol
, vol.9
, pp. 576-583
-
-
Yannarell, A.C.1
Steppe, T.F.2
Paerl, H.W.3
-
115
-
-
0030070838
-
DNA recovery from soils of diverse composition
-
Zhou, J., Bruns, M. A., and Tiedje, J. M. (1996) DNA recovery from soils of diverse composition. Appl Environ Microbiol 62:316-322. (Pubitemid 26047397)
-
(1996)
Applied and Environmental Microbiology
, vol.62
, Issue.2
, pp. 316-322
-
-
Zhou, J.1
Bruns, M.A.2
Tiedje, J.M.3
-
116
-
-
10344266502
-
Nitrogen and phosphorus uptake and release by the blue-green alga Microcoleus lyngbyaceus
-
Zimmermann, C. F. (1989) Nitrogen and phosphorus uptake and release by the blue-green alga Microcoleus lyngbyaceus. Journal of Aquatic Plant Management 27:49-51.
-
(1989)
Journal of Aquatic Plant Management
, vol.27
, pp. 49-51
-
-
Zimmermann, C.F.1
|