-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
-
Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
4344676789
-
A polyhydroxybutyrate producing Pseudomonas sp. isolated from Antarctic environments with high stress resistance
-
Ayub ND, Pettinari MJ, Ruiz JA, López NI (2004) A polyhydroxybutyrate producing Pseudomonas sp. isolated from Antarctic environments with high stress resistance. Curr Microbiol 49: 170-174.
-
(2004)
Curr Microbiol
, vol.49
, pp. 170-174
-
-
Ayub, N.D.1
Pettinari, M.J.2
Ruiz, J.A.3
López, N.I.4
-
3
-
-
58149204233
-
Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation
-
Ayub ND, Tribelli PM, López NI (2009) Polyhydroxyalkanoates are essential for maintenance of redox state in the Antarctic bacterium Pseudomonas sp. 14-3 during low temperature adaptation. Extremophiles 13: 59-66.
-
(2009)
Extremophiles
, vol.13
, pp. 59-66
-
-
Ayub, N.D.1
Tribelli, P.M.2
López, N.I.3
-
4
-
-
0033975110
-
Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions
-
Chayabutra C, Ju LK (2000) Degradation of n-hexadecane and its metabolites by Pseudomonas aeruginosa under microaerobic and anaerobic denitrifying conditions. Appl Environ Microbiol 66: 493-498.
-
(2000)
Appl Environ Microbiol
, vol.66
, pp. 493-498
-
-
Chayabutra, C.1
Ju, L.K.2
-
5
-
-
0348230977
-
The application of biofilm science to the study and control of chronic bacterial infections
-
Costerton W, Veeh R, Shirtliff M, Pasmore M, Post C, Ehrlich G (2003) The application of biofilm science to the study and control of chronic bacterial infections. J Clin Invest 112: 1466-1477.
-
(2003)
J Clin Invest
, vol.112
, pp. 1466-1477
-
-
Costerton, W.1
Veeh, R.2
Shirtliff, M.3
Pasmore, M.4
Post, C.5
Ehrlich, G.6
-
6
-
-
0033841430
-
Microbial biofilms in intertidal systems: an overview
-
Decho AW (2000) Microbial biofilms in intertidal systems: an overview. Cont Shelf Res 20: 1257-1273.
-
(2000)
Cont Shelf Res
, vol.20
, pp. 1257-1273
-
-
Decho, A.W.1
-
7
-
-
0023632006
-
Controlled and functional expression of the Pseudomonas oleovorans alkane utilizing system in Pseudomonas putida and Escherichia coli
-
Eggink G, Lageveen R, Altenburg B, Witholt B (1987) Controlled and functional expression of the Pseudomonas oleovorans alkane utilizing system in Pseudomonas putida and Escherichia coli. J Biol Chem 216: 17712-17718.
-
(1987)
J Biol Chem
, vol.216
, pp. 17712-17718
-
-
Eggink, G.1
Lageveen, R.2
Altenburg, B.3
Witholt, B.4
-
8
-
-
5444274656
-
Bioremediation of vegetable oil and grease from polluted wastewater using a sand biofilm system
-
El-Masry MH, El-Bestaway E, El-Adl NI (2004) Bioremediation of vegetable oil and grease from polluted wastewater using a sand biofilm system. World J Microbiol Biotechnol 20: 551-557.
-
(2004)
World J Microbiol Biotechnol
, vol.20
, pp. 551-557
-
-
El-Masry, M.H.1
El-Bestaway, E.2
El-Adl, N.I.3
-
9
-
-
0035989562
-
Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligatory utilizes hydrocarbons
-
Golyshin PN, Chernikova TN, Abraham WR, Lunsdorf H, Timmis KN, Yakimov MM (2002) Oleiphilaceae fam. nov., to include Oleiphilus messinensis gen. nov., sp. nov., a novel marine bacterium that obligatory utilizes hydrocarbons. Int J Syst Evol Microbiol 52: 901-911.
-
(2002)
Int J Syst Evol Microbiol
, vol.52
, pp. 901-911
-
-
Golyshin, P.N.1
Chernikova, T.N.2
Abraham, W.R.3
Lunsdorf, H.4
Timmis, K.N.5
Yakimov, M.M.6
-
11
-
-
33745942487
-
A new method for the detection of alkane monooxygenase homologous genes (alkB) in soils based on PCR-hybridization
-
Kloos K, Munch JM, Schloter M (2006) A new method for the detection of alkane monooxygenase homologous genes (alkB) in soils based on PCR-hybridization. J Microbiol Methods 66: 486-496.
-
(2006)
J Microbiol Methods
, vol.66
, pp. 486-496
-
-
Kloos, K.1
Munch, J.M.2
Schloter, M.3
-
12
-
-
3242810318
-
MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment
-
Kumar S, Tamura K, Nei M (2004) MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5: 150-163.
-
(2004)
Brief Bioinform
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
13
-
-
0000780695
-
Formation of Polyesters by Pseudomonas oleovorans: effect of substrates on formation and composition of poly-(R)-3-hydroxyalkanoates and poly-(R)-3-hydroxyalkenoates
-
Lageveen RG, Huisman GW, Preusting H, Ketelaar P, Eggink G (1988) Formation of Polyesters by Pseudomonas oleovorans: effect of substrates on formation and composition of poly-(R)-3-hydroxyalkanoates and poly-(R)-3-hydroxyalkenoates. Appl Environ Microbiol 54: 2924-2932.
-
(1988)
Appl Environ Microbiol
, vol.54
, pp. 2924-2932
-
-
Lageveen, R.G.1
Huisman, G.W.2
Preusting, H.3
Ketelaar, P.4
Eggink, G.5
-
14
-
-
75849147281
-
Geobacillus
-
2nd edn., P. VosDe, G. M. Garrity, D. Jones, N. R. Krieg, W. Ludwig, F. R. Rainey, K.-H. Schleifer, and W. B. Whitman (Eds.), New York: Springer
-
Logan NA, DeVos P, Dinsdale A (2009) Geobacillus. In: De Vos P, Garrity GM, Jones D, Krieg NR, Ludwig W, Rainey FR, Schleifer K-H, Whitman WB (eds) Bergey's manual of systematic bacteriology, vol 3, 2nd edn. Springer, New York, pp 144-160.
-
(2009)
Bergey's Manual of Systematic Bacteriology
, vol.3
, pp. 144-160
-
-
Logan, N.A.1
Devos, P.2
Dinsdale, A.3
-
15
-
-
0028963240
-
Effect of poly-3-hydroxybutyrate content on the starvation survival of bacteria in natural waters
-
López NI, Floccari ME, Garcia AF, Steinbüchel A, Mendez BS (1995) Effect of poly-3-hydroxybutyrate content on the starvation survival of bacteria in natural waters. FEMS Microbiol Ecol 16: 95-101.
-
(1995)
FEMS Microbiol Ecol
, vol.16
, pp. 95-101
-
-
López, N.I.1
Floccari, M.E.2
Garcia, A.F.3
Steinbüchel, A.4
Mendez, B.S.5
-
16
-
-
70349962990
-
Pseudomonas extremaustralis sp. nov. A poly(3-hydroxybutyrate) producer isolated from an Antarctic environment
-
López NI, Pettinari MJ, Stackebrandt E, Tribelli PM, Pötter M, Steinbüchel A, Méndez B (2009) Pseudomonas extremaustralis sp. nov. A poly(3-hydroxybutyrate) producer isolated from an Antarctic environment. Curr Microbiol 59: 514-519.
-
(2009)
Curr Microbiol
, vol.59
, pp. 514-519
-
-
López, N.I.1
Pettinari, M.J.2
Stackebrandt, E.3
Tribelli, P.M.4
Pötter, M.5
Steinbüchel, A.6
Méndez, B.7
-
17
-
-
0038304116
-
Differential expression of the components of the two alkane hydroxylases from Pseudomonas aeruginosa
-
Marín M, Yuste L, Rojo F (2003) Differential expression of the components of the two alkane hydroxylases from Pseudomonas aeruginosa. J Bacteriol 185: 3232-3237.
-
(2003)
J Bacteriol
, vol.185
, pp. 3232-3237
-
-
Marín, M.1
Yuste, L.2
Rojo, F.3
-
18
-
-
77954539839
-
Biosyhthesis of medium-chain-length poly(3-hydoxyalkanoates) by volatile aromatic hydrocarbons-degrading Pseudomonas fulva TY16
-
Ni YY, Kim DY, Chung MG, Lee SH, Park HY, Rhee YH (2010) Biosyhthesis of medium-chain-length poly(3-hydoxyalkanoates) by volatile aromatic hydrocarbons-degrading Pseudomonas fulva TY16. Bioresour Technol 101: 8485-8488.
-
(2010)
Bioresour Technol
, vol.101
, pp. 8485-8488
-
-
Ni, Y.Y.1
Kim, D.Y.2
Chung, M.G.3
Lee, S.H.4
Park, H.Y.5
Rhee, Y.H.6
-
19
-
-
0031724115
-
Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development
-
O'Toole GA, Kolter R (1998) Flagellar and twitching motility are necessary for Pseudomonas aeruginosa biofilm development. Mol Microbiol 30: 295-304.
-
(1998)
Mol Microbiol
, vol.30
, pp. 295-304
-
-
O'Toole, G.A.1
Kolter, R.2
-
20
-
-
0020326060
-
Nile Blue A as a fluorescent stain for polyhydroxybutyrate
-
Ostle A, Holt JG (1982) Nile Blue A as a fluorescent stain for polyhydroxybutyrate. Appl Environ Microbiol 44: 238-241.
-
(1982)
Appl Environ Microbiol
, vol.44
, pp. 238-241
-
-
Ostle, A.1
Holt, J.G.2
-
21
-
-
33947155714
-
Multiple roles of biosurfactants in structural biofilm development by Pseudomonas aeruginosa
-
Pamp S, Tolker-Nielsen T (2007) Multiple roles of biosurfactants in structural biofilm development by Pseudomonas aeruginosa. J Bacteriol 189: 2531-2539.
-
(2007)
J Bacteriol
, vol.189
, pp. 2531-2539
-
-
Pamp, S.1
Tolker-Nielsen, T.2
-
22
-
-
6444241117
-
The role of polyhydroxyalkanoate biosynthesis by Pseudomonas aeruginosa in rhamnolipid and alginate production as well as stress tolerance and biofilm formation
-
Pham T, Webb J, Rehm B (2004) The role of polyhydroxyalkanoate biosynthesis by Pseudomonas aeruginosa in rhamnolipid and alginate production as well as stress tolerance and biofilm formation. Microbiology 150: 3405-3413.
-
(2004)
Microbiology
, vol.150
, pp. 3405-3413
-
-
Pham, T.1
Webb, J.2
Rehm, B.3
-
23
-
-
34250865692
-
Bile salts enhance bacterial co-aggregation, bacterial-intestinal epithelial cell adhesion, biofilm formation and antimicrobial resistance of Bacteroides fragilis
-
Pumbwe L, Skilbeck C, Nakano V, Avila-Campos M, Piazza R, Wexler H (2007) Bile salts enhance bacterial co-aggregation, bacterial-intestinal epithelial cell adhesion, biofilm formation and antimicrobial resistance of Bacteroides fragilis. Microb Pathog 43: 78-87.
-
(2007)
Microb Pathog
, vol.43
, pp. 78-87
-
-
Pumbwe, L.1
Skilbeck, C.2
Nakano, V.3
Avila-Campos, M.4
Piazza, R.5
Wexler, H.6
-
24
-
-
70349655393
-
Degradation of alkanes by bacteria
-
Rojo F (2005) Degradation of alkanes by bacteria. Environ Microbiol 11: 2477-2490.
-
(2005)
Environ Microbiol
, vol.11
, pp. 2477-2490
-
-
Rojo, F.1
-
25
-
-
0036624819
-
Biosurfactants and oil bioremediation
-
Ron Z, Rosenberg E (2002) Biosurfactants and oil bioremediation. Curr Opin Biotechnol 13: 249-252.
-
(2002)
Curr Opin Biotechnol
, vol.13
, pp. 249-252
-
-
Ron, Z.1
Rosenberg, E.2
-
26
-
-
2442685422
-
rpoS gene expression in carbon starved cultures of the polyhydroxyalkanoate accumulating species Pseudomonas oleovorans
-
Ruiz JA, López NI, Méndez BS (2004) rpoS gene expression in carbon starved cultures of the polyhydroxyalkanoate accumulating species Pseudomonas oleovorans. Curr Microbiol 48: 396-400.
-
(2004)
Curr Microbiol
, vol.48
, pp. 396-400
-
-
Ruiz, J.A.1
López, N.I.2
Méndez, B.S.3
-
27
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425.
-
(1987)
Mol Biol Evol
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
28
-
-
84755161511
-
Reduction of oxidative stress by bioaugmented strain Pseudomonas sp. HF-1 and selection of potential biomarkers in sequencing batch reactor treating tobacco wastewater
-
Shao T, Yang G, Wang M, Lu Z, Min H, Zhao L (2010) Reduction of oxidative stress by bioaugmented strain Pseudomonas sp. HF-1 and selection of potential biomarkers in sequencing batch reactor treating tobacco wastewater. Ecotoxicology 19: 1117-1123.
-
(2010)
Ecotoxicology
, vol.19
, pp. 1117-1123
-
-
Shao, T.1
Yang, G.2
Wang, M.3
Lu, Z.4
Min, H.5
Zhao, L.6
-
29
-
-
33747178765
-
Biofilms: implications in bioremediation
-
Singh R, Paul D, Jain RK (2006) Biofilms: implications in bioremediation. Trends Microbiol 14: 389-397.
-
(2006)
Trends Microbiol
, vol.14
, pp. 389-397
-
-
Singh, R.1
Paul, D.2
Jain, R.K.3
-
30
-
-
27544474339
-
The Pseudomonas aeruginosa RhlA enzyme is involved in rhamnolipid and polyhydroxyalkanoate production
-
Soberón-Chávez G, Aguirre-Rami{dotless}rez M, Sánchez R (2005) The Pseudomonas aeruginosa RhlA enzyme is involved in rhamnolipid and polyhydroxyalkanoate production. J Ind Microbiol Biotechnol 32: 675-677.
-
(2005)
J Ind Microbiol Biotechnol
, vol.32
, pp. 675-677
-
-
Soberón-Chávez, G.1
Aguirre-Ramirez, M.2
Sánchez, R.3
-
32
-
-
84860416260
-
Poly(3-hydroxybutyrate) influences biofilm formation and motility in the novel Antarctic species Pseudomonas extremaustralis under cold conditions
-
Tribelli PM, Lopez NI (2011) Poly(3-hydroxybutyrate) influences biofilm formation and motility in the novel Antarctic species Pseudomonas extremaustralis under cold conditions. Extremophiles 15: 541-547.
-
(2011)
Extremophiles
, vol.15
, pp. 541-547
-
-
Tribelli, P.M.1
Lopez, N.I.2
-
33
-
-
79952186054
-
Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes
-
Tyagi M, Fonseca MMR, Carvalho CCCR (2011) Bioaugmentation and biostimulation strategies to improve the effectiveness of bioremediation processes. Biodegradation 22: 231-241.
-
(2011)
Biodegradation
, vol.22
, pp. 231-241
-
-
Tyagi, M.1
Fonseca, M.M.R.2
Carvalho, C.C.C.R.3
-
35
-
-
0041916075
-
Diversity of alkane hydroxylase systems in the environment
-
van Beilen JB, Li Z, Duetz WA, Smits THM, Witholt B (2003) Diversity of alkane hydroxylase systems in the environment. Oil Gas Sci Technol 4: 427-440.
-
(2003)
Oil Gas Sci Technol
, vol.4
, pp. 427-440
-
-
van Beilen, J.B.1
Li, Z.2
Duetz, W.A.3
Smits, T.H.M.4
Witholt, B.5
-
37
-
-
77049313195
-
Acetylornithinase of Escherichia coli: partial purification and some properties
-
Vogel HJ, Bonner BN (1956) Acetylornithinase of Escherichia coli: partial purification and some properties. J Biol Chem 218: 97-106.
-
(1956)
J Biol Chem
, vol.218
, pp. 97-106
-
-
Vogel, H.J.1
Bonner, B.N.2
-
38
-
-
0242669334
-
Gene cloning and characterization of multiple alkane hydroxylase systems in Rhodococcus strains Q15 and NRRL B-16531
-
Whyte LG, Smits THM, Labbé D, Witholt B, Greer CW, van Beilen JB (2002) Gene cloning and characterization of multiple alkane hydroxylase systems in Rhodococcus strains Q15 and NRRL B-16531. Appl Environ Microbiol 68: 5933-5942.
-
(2002)
Appl Environ Microbiol
, vol.68
, pp. 5933-5942
-
-
Whyte, L.G.1
Smits, T.H.M.2
Labbé, D.3
Witholt, B.4
Greer, C.W.5
van Beilen, J.B.6
|