Expression Analysis of TaNAC69-1 and TtNAMB-2, Wheat NAC Family Transcription Factor Genes Under Abiotic Stress Conditions in Durum Wheat (Triticum turgidum)

Plant Molecular Biology Reporter

Volumn 30, Issue 5, 2012, Pages 1246-1252

  Baloglu, Mehmet Cengiz ^a,b   Oz, Mehmet Tufan ^a   Oktem, Huseyin Avni ^a   Yucel, Meral ^a  

^a MIDDLE EAST TECHNICAL UNIVERSITY   (Turkey)

^b KASTAMONU UNIVERSITY   (Turkey)

Author keywords

Gene expression; NAC type transcription factors; RT qPCR; Wheat

Indexed keywords

TRITICUM AESTIVUM; TRITICUM TURGIDUM; TRITICUM TURGIDUM SUBSP. DURUM;

EID: 84865428596     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-012-0445-3     Document Type: Article

References (34)

1. Agarwal P, Agarwal PK, Joshi AJ, Sopory SK, Reddy MK (2010) Overexpression of PgDREB2A transcription factor enhances abiotic stress tolerance and activates downstream stress-responsive genes. Mol Biol Rep 37: 1125-1135.
2. Aida M, Ishida T, Fukaki H, Fujisawa H, Tasaka M (1997) Genes involved in organ separation in Arabidopsis: an analysis of the cup-shaped cotyledon mutant. Plant Cell 9: 841-857.
3. Buchanan-Wollaston V, Page T, Harrison E, Breeze E, Lim PO, Nam HG, Lin J-F, Wu S-H, Swidzinski J, Ishizaki K, Leaver CJ (2005) Comparative transcriptome analysis reveals significant differences in gene expression and signaling pathways between developmental and dark/starvation-induced senescence in Arabidopsis. Plant J 42: 567-585.
4. Chomczynski P, Mackey K (1995) Modification of the TRIzol reagent procedure for isolation of RNA from Polysaccharide-and proteoglycan-rich sources. Biotechniques 19(6): 942-945.
5. Fan J, Gao X, Yang YW, Deng W, Li ZG (2007) Molecular cloning and characterization of a NAC-like gene in "navel" orange fruit response to postharvest stresses. Plant Mol Biol Rep 25: 145-153.
6. Fujita M, Fujita Y, Maruyama K, Seki M, Hiratsu K, Ohme-Takagi M, Tran L-SP, Yamaguchi-Shinozaki K, Shinozaki K (2004) A dehydration-induced NAC protein, RD26, is involved in a novel ABA-dependent stress-signaling pathway. Plant J 39: 863-876.
7. Gao F, Xiong A, Peng R, Jin X, Xu J, Zhu B, Chen J, Yao Q (2009) OsNAC52, a rice NAC transcription factor, potentially responds to ABA and confers drought tolerance in transgenic plants. Plant Cell Tiss Org 100: 255-262.
8. Gong W, Shen Y-P, Ma L-G, Pan Y, Du Y-L, Wang D-H, Yang J-Y, Hu L-D, Liu X-F, Dong C-X, Ma L, Chen Y-H, Yang X-Y, Gao Y, Zhu D, Tan X, Mu J-Y, Zhang D-B, Liu Y-L, Dinesh-Kumar SP, Li Y, Wang X-P, Gu H-Y, Qu L-J, Bai S-N, Lu Y-T, Li J-Y, Zhao J-D, Zuo J, Huang H, Deng XW, Zhu Y-X (2004) Genome-wide ORFeome cloning and analysis of Arabidopsis transcription factor genes. Plant Physiol 135: 773-782.
9. Guo Y, Cai Z, Gan S (2004) Transcriptome of Arabidopsis leaf senescence. Plant Cell Environ 27: 521-549.
10. Gupta PK, Mir RR, Mohan A, Kumar J (2008) Wheat genomics: present status and future prospects. Int J Plant Genom. doi: 10. 1155/2008/896451.
11. Han X, He G, Zhao S, Guo C, Lu M (2011) Expression analysis of two NAC transcription factors PtNAC068 and PtNAC154 from poplar. Plant Mol Biol Rep. doi: 10. 1007/s11105-011-0350-1.
12. Hoagland DR, Arnon DI (1950) The water-culture method for growing plants without soil. Cal Agric Exp Sta Ciru 347: 1-32.
13. Hu H, Dai M, Yao J, Xiao B, Li X, Zhang Q, Xiong L (2006) Overexpressing a NAM, ATAF, and CUC (NAC) transcription factor enhances drought resistance and salt tolerance in rice. P Natl Acad Sci USA 103: 12987-12992.
14. Hu H, You J, Fang Y, Zhu X, Qi Z, Xiong L (2008) Characterization of transcription factor gene SNAC2 conferring cold and salt tolerance in rice. Plant Mol Biol 67: 169-181.
15. Larue CT, Wen J, Walker JC (2009) Interactions between a NAC-domain transcription factor and the putative small protein encoding DVL/ROT gene family. Plant Mol Biol Rep 28: 162-168.
16. Liu YZ, Baig MNR, Fan R, Ye JL, Cao YC, Deng XX (2009) Identification and expression pattern of a novel NAM, ATAF, and CUC-like gene from Citrus sinensis Osbeck. Plant Mol Biol Rep 27: 292-297.
17. Meng Q, Zhang C, Gai J, Yu D (2007) Molecular cloning, sequence characterization and tissue-specific expression of six NAC-like genes in soybean (Glycine max (L.) Merr.). J Plant Physiol 164: 1002-1012.
18. Meng C, Cai C, Zhang T, Guo W (2009) Characterization of six novel NAC genes and their responses to abiotic stresses in Gossypium hirsutum L. Plant Sci 176: 352-359.
19. Olsen AN, Ernst HA, Leggio LL, Skriver K (2005) NAC transcription factors: structurally distinct, functionally diverse. Trends Plant Sci 10: 79-87.
20. Ooka H, Satoh K, Doi K, Nagata T, Otomo Y, Murakami K, Matsubara K, Osato N, Kawai J, Carninci P, Hayashizaki Y, Suzuki K, Kojima K, Takahara Y, Yamamoto K, Kikuchi S (2003) Comprehensive analysis of NAC family genes in Oryza sativa and Arabidopsis thaliana. DNA Res 10: 239-247.
21. Patnaik D (2001) Wheat biotechnology: a minireview. Electron J Biotech 4: 1-29.
22. Peng H, Cheng H-Y, Chen C, Yu X-W, Yang J-N, Gao W-R, Shi Q-H, Zhang H, Li J-G, Ma H (2009a) A NAC transcription factor gene of Chickpea (Cicer arietinum), CarNAC3, is involved in drought stress response and various developmental processes. J Plant Physiol 166: 1934-1945.
23. Peng H, Cheng H-Y, Yu X-W, Shi Q-H, Zhang H, Li J-G, Ma H (2009b) Characterization of a chickpea (Cicer arietinum L.) NAC family gene, CarNAC5, which is both developmentally- and stress-regulated. Plant Physiol Bioch 47: 1037-1045.
24. Peng H, Yu X, Cheng H, Shi Q, Zhang H, Jiangui L, Ma H (2010) Cloning and characterization of a novel NAC family gene CarNAC1 from chickpea (Cicer arietinum L.). Mol Biotech 44: 30-40.
25. Rosegrant M, Paisner M, Meijer S, Witcover J (2001) Global food projections to 2020: emerging trends and alternative futures. Int Food Policy Res Instit.
26. Seki M, Kamei A, Yamaguchi-Shinozaki K, Shinozaki K (2003) Molecular responses to drought, salinity and frost: common and different paths for plant protection. Curr Opin Biotech 14: 194-199.
27. Taylor S, Wakem M, Dijkman G, Alsarraj M, Nguyen M (2010) A practical approach to RT-qPCR-publishing data that conform to the MIQE guidelines. Methods 50: S1-S5.
28. Tran L-SP, Nakashima K, Sakuma Y, Simpson SD, Fujita Y, Maruyama K, Fujita M, Seki M, Shinozaki K, Yamaguchi-Shinozaki K (2004) Isolation and functional analysis of Arabidopsis stress-inducible NAC transcription factors that bind to a drought-responsive cis-element in the early responsive to dehydration stress 1 promoter. Plant Cell 16: 2481-2498.
29. Tran L-SP, Quach TN, Guttikonda SK, Aldrich DL, Kumar R, Neelakandan A, Valliyodan B, Nguyen HT (2009) Molecular characterization of stress-inducible GmNAC genes in soybean. Mol Genet Genomics 281: 647-664.
30. Uauy C, Distelfeld A, Fahima T, Blechl A, Dubcovsky J (2006) A NAC Gene regulating senescence improves grain protein, zinc, and iron content in wheat. Science 314: 1298-1301.
31. Xia N, Zhang G, Liu X-Y, Deng L, Cai G-L, Zhang Y, Xiao-Jie W, Zhao J, Huang L-L, Kang Z-S (2010a) Characterization of a novel wheat NAC transcription factor gene involved in defense response against stripe rust pathogen infection and abiotic stresses. Mol Biol Rep 37: 3703-3712.
32. Xia N, Zhang G, Sun Y-F, Zhu L, Xu L-S, Chen X-M, Liu B, Yu Y-T, Xiao-Jie W, Huang L-L (2010b) TaNAC8, a novel NAC transcription factor gene in wheat, responds to stripe rust pathogen infection and abiotic stresses. Physiol Mol Plant P 74: 394-402.
33. Xiong Y, Liu T, Tian C, Sun S, Jiayang L, Chen M (2005) Transcription factors in rice: a genome-wide comparative analysis between monocots and eudicots. Plant Mol Biol 59: 191-203.
34. Zheng X, Chen B, Lu G, Han B (2009) Overexpression of a NAC transcription factor enhances rice drought and salt tolerance. Biochem Bioph Res Co 379: 985-989.