-
1
-
-
0034924241
-
Determination of minimum inhibitory concentrations
-
Andrews JM. 2001. Determination of minimum inhibitory concentrations. J. Antimicrob. Chemother. 48(Suppl 1):5-16.
-
(2001)
J. Antimicrob. Chemother.
, vol.48
, Issue.SUPPL. 1
, pp. 5-16
-
-
Andrews, J.M.1
-
2
-
-
31544450286
-
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: The Keio collection
-
Baba T, et al. 2006. Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2:2006.0008.
-
(2006)
Mol. Syst. Biol.
, vol.2
-
-
Baba, T.1
-
3
-
-
0028270774
-
Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis
-
Black DS, Irwin B, Moyed HS. 1994. Autoregulation of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis. J. Bacteriol. 176:4081-4091. (Pubitemid 24191293)
-
(1994)
Journal of Bacteriology
, vol.176
, Issue.13
, pp. 4081-4091
-
-
Black, D.S.1
Irwin, B.2
Moyed, H.S.3
-
4
-
-
0025940779
-
Structure and organization of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis
-
Black DS, Kelly AJ, Mardis MJ, Moyed HS. 1991. Structure and organization of hip, an operon that affects lethality due to inhibition of peptidoglycan or DNA synthesis. J. Bacteriol. 173:5732-5739.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 5732-5739
-
-
Black, D.S.1
Kelly, A.J.2
Mardis, M.J.3
Moyed, H.S.4
-
5
-
-
43149105201
-
Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks
-
doi:10.1371/journal.pone.0001186
-
Blanchard JL, Wholey WY, Conlon EM, Pomposiello PJ. 2007. Rapid changes in gene expression dynamics in response to superoxide reveal SoxRS-dependent and independent transcriptional networks. PLoS One 2:e1186. doi:10.1371/journal. pone.0001186.
-
(2007)
PLoS One
, vol.2
-
-
Blanchard, J.L.1
Wholey, W.Y.2
Conlon, E.M.3
Pomposiello, P.J.4
-
6
-
-
0141788221
-
Involvement of rpoS in the survival of Escherichia coli in the viable but non-culturable state
-
DOI 10.1046/j.1462-2920.2003.00497.x
-
Boaretti M, Lleo MM, Bonato B, Signoretto C, Canepari P. 2003. Involvement of rpoS in the survival of Escherichia coli in the viable but non-culturable state. Environ. Microbiol. 5:986-996. (Pubitemid 37181569)
-
(2003)
Environmental Microbiology
, vol.5
, Issue.10
, pp. 986-996
-
-
Boaretti, M.1
Lleo, M.D.M.2
Bonato, B.3
Signoretto, C.4
Canepari, P.5
-
7
-
-
0034002551
-
A dose-response study of antibiotic resistance in Pseudomonas aeruginosa biofilms
-
DOI 10.1128/AAC.44.3.640-646.2000
-
Brooun A, Liu S, Lewis K. 2000. A dose-response study of antibiotic resistance in Pseudomonas aeruginosa biofilms. Antimicrob. Agents Chemother. 44:640-646. (Pubitemid 30117954)
-
(2000)
Antimicrobial Agents and Chemotherapy
, vol.44
, Issue.3
, pp. 640-646
-
-
Brooun, A.1
Liu, S.2
Lewis, K.3
-
8
-
-
0041825422
-
Toxin-antitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA
-
DOI 10.1016/S0022-2836(03)00922-7
-
Christensen SK, Pedersen K, Hansen FG, Gerdes K. 2003. Toxinantitoxin loci as stress-response-elements: ChpAK/MazF and ChpBK cleave translated RNAs and are counteracted by tmRNA. J. Mol. Biol. 332:809-819. (Pubitemid 37101369)
-
(2003)
Journal of Molecular Biology
, vol.332
, Issue.4
, pp. 809-819
-
-
Christensen, S.K.1
Pedersen, K.2
Hansen, F.G.3
Gerdes, K.4
-
9
-
-
33845428404
-
Kinase activity of overexpressed HipA is required for growth arrest and multidrug tolerance in Escherichia coli
-
DOI 10.1128/JB.01237-06
-
Correia FF, et al. 2006. Kinase activity of overexpressed HipA is required for growth arrest and multidrug tolerance in Escherichia coli. J. Bacteriol. 188:8360-8367. (Pubitemid 44894035)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.24
, pp. 8360-8367
-
-
Correia, F.F.1
D'Onofrio, A.2
Rejtar, T.3
Li, L.4
Karger, B.L.5
Makarova, K.6
Koonin, E.V.7
Lewis, K.8
-
10
-
-
0030448704
-
The redox state of the [2Fe-2S] clusters in SoxR protein regulates its activity as a transcription factor
-
DOI 10.1074/jbc.271.52.33173
-
Ding H, Hidalgo E, Demple B. 1996. The redox state of the [2Fe-2S] clusters in SoxR protein regulates its activity as a transcription factor. J. Biol. Chem. 271:33173-33175. (Pubitemid 27010121)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.52
, pp. 33173-33175
-
-
Ding, H.1
Hidalgo, E.2
Demple, B.3
-
11
-
-
74249107300
-
SOS response induces persistence to fluoroquinolones in Escherichia coli
-
doi:10.1371/journal.pgen.1000760
-
Dörr T, Lewis K, Vulic M. 2009. SOS response induces persistence to fluoroquinolones in Escherichia coli. PLoS Genet. 5:e1000760. doi:10.1371/journal.pgen.1000760.
-
(2009)
PLoS Genet.
, vol.5
-
-
Dörr, T.1
Lewis, K.2
Vulic, M.3
-
12
-
-
77649174212
-
Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli
-
doi:10.1371/journal.pbio.1000317
-
Dörr T, Vulic M, Lewis K. 2010. Ciprofloxacin causes persister formation by inducing the TisB toxin in Escherichia coli. PLoS Biol. 8:e1000317. doi:10.1371/journal.pbio.1000317.
-
(2010)
PLoS Biol.
, vol.8
-
-
Dörr, T.1
Vulic, M.2
Lewis, K.3
-
13
-
-
0032826448
-
Polymyxin B sulfate and colistin: Old antibiotics for emerging multiresistant gram-negative bacteria
-
DOI 10.1345/aph.18426
-
Evans ME, Feola DJ, Rapp RP. 1999. Polymyxin B sulfate and colistin: old antibiotics for emerging multiresistant gram-negative bacteria. Ann. Pharmacother. 33:960-967. (Pubitemid 29420995)
-
(1999)
Annals of Pharmacotherapy
, vol.33
, Issue.9
, pp. 960-967
-
-
Evans, M.E.1
Feola, D.J.2
Rapp, R.P.3
-
14
-
-
0029790760
-
SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form
-
DOI 10.1073/pnas.93.19.10094
-
Gaudu P, Weiss B. 1996. SoxR, a [2Fe-2S] transcription factor, is active only in its oxidized form. Proc. Natl. Acad. Sci. U. S. A. 93:10094-10098. (Pubitemid 26314580)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.19
, pp. 10094-10098
-
-
Gaudu, P.1
Weiss, B.2
-
15
-
-
84864281978
-
Persister-promoting bacterial toxin TisB produces anion-selective pores in planar lipid bilayers
-
21 June [Epub ahead of print.] doi:10.1016/j.febslet.2012.06.021
-
Gurnev PA, Ortenberg R, Dörr T, Lewis K, Bezrukov SM. 21 June 2012. Persister-promoting bacterial toxin TisB produces anion-selective pores in planar lipid bilayers. FEBS Lett. [Epub ahead of print.] doi:10.1016/j.febslet. 2012.06.021.
-
(2012)
FEBS Lett.
-
-
Gurnev, P.A.1
Ortenberg, R.2
Dörr, T.3
Lewis, K.4
Bezrukov, S.M.5
-
16
-
-
1442349125
-
Killing by Ampicillin and Ofloxacin Induces Overlapping Changes in Escherichia coli Transcription Profile
-
DOI 10.1128/AAC.48.3.890-896.2004
-
Kaldalu N, Mei R, Lewis K. 2004. Killing by ampicillin and ofloxacin induces overlapping changes in Escherichia coli transcription profile. Antimicrob. Agents Chemother. 48:890-896. (Pubitemid 38280340)
-
(2004)
Antimicrobial Agents and Chemotherapy
, vol.48
, Issue.3
, pp. 890-896
-
-
Kaldalu, N.1
Mei, R.2
Lewis, K.3
-
17
-
-
0346492817
-
Persister cells and tolerance to antimicrobials
-
DOI 10.1016/S0378-1097(03)00856-5
-
Keren I, Kaldalu N, Spoering A, Wang Y, Lewis K. 2004. Persister cells and tolerance to antimicrobials. FEMS Microbiol. Lett. 230:13-18. (Pubitemid 38091733)
-
(2004)
FEMS Microbiology Letters
, vol.230
, Issue.1
, pp. 13-18
-
-
Keren, I.1
Kaldalu, N.2
Spoering, A.3
Wang, Y.4
Lewis, K.5
-
18
-
-
84855195248
-
Characterization and transcriptome analysis of Mycobacterium tuberculosis persisters
-
doi:10.1128/mBio.00100-11
-
Keren I, Minami S, Rubin E, Lewis K. 2011. Characterization and transcriptome analysis of Mycobacterium tuberculosis persisters. mBio 2:e00100-11. doi:10.1128/mBio.00100-11.
-
(2011)
mBio
, vol.2
-
-
Keren, I.1
Minami, S.2
Rubin, E.3
Lewis, K.4
-
19
-
-
10044266575
-
Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli
-
DOI 10.1128/JB.186.24.8172-8180.2004
-
Keren I, Shah D, Spoering A, Kaldalu N, Lewis K. 2004. Specialized persister cells and the mechanism of multidrug tolerance in Escherichia coli. J. Bacteriol. 186:8172-8180. (Pubitemid 39603206)
-
(2004)
Journal of Bacteriology
, vol.186
, Issue.24
, pp. 8172-8180
-
-
Keren, I.1
Shah, D.2
Spoering, A.3
Kaldalu, N.4
Lewis, K.5
-
20
-
-
34548213103
-
A Common Mechanism of Cellular Death Induced by Bactericidal Antibiotics
-
DOI 10.1016/j.cell.2007.06.049, PII S0092867407008999
-
Kohanski MA, Dwyer DJ, Hayete B, Lawrence CA, Collins JJ. 2007. A common mechanism of cellular death induced by bactericidal antibiotics. Cell 130:797-810. (Pubitemid 47332566)
-
(2007)
Cell
, vol.130
, Issue.5
, pp. 797-810
-
-
Kohanski, M.A.1
Dwyer, D.J.2
Hayete, B.3
Lawrence, C.A.4
Collins, J.J.5
-
21
-
-
0344826574
-
Characterization of the hipA7 allele of Escherichia coli and evidence that high persistence is governed by (p)ppGpp synthesis
-
DOI 10.1046/j.1365-2958.2003.03779.x
-
Korch SB, Henderson TA, Hill TM. 2003. Characterization of the hipA7 allele of Escherichia coli and evidence that high persistence is governed by (p)ppGpp synthesis. Mol. Microbiol. 50:1199-1213. (Pubitemid 37475853)
-
(2003)
Molecular Microbiology
, vol.50
, Issue.4
, pp. 1199-1213
-
-
Korch, S.B.1
Henderson, T.A.2
Hill, T.M.3
-
22
-
-
33750596264
-
Candida albicans biofilms produce antifungal-tolerant persister cells
-
DOI 10.1128/AAC.00684-06
-
LaFleur MD, Kumamoto CA, Lewis K. 2006. Candida albicans biofilms produce antifungal-tolerant persister cells. Antimicrob. Agents Chemother. 50:3839-3846. (Pubitemid 44684901)
-
(2006)
Antimicrobial Agents and Chemotherapy
, vol.50
, Issue.11
, pp. 3839-3846
-
-
LaFleur, M.D.1
Kumamoto, C.A.2
Lewis, K.3
-
23
-
-
73849102829
-
Patients with long-term oral carriage harbor high-persister mutants of Candida albicans
-
LaFleur MD, Qi Q, Lewis K. 2010. Patients with long-term oral carriage harbor high-persister mutants of Candida albicans. Antimicrob. Agents Chemother. 54:39-44.
-
(2010)
Antimicrob. Agents Chemother.
, vol.54
, pp. 39-44
-
-
LaFleur, M.D.1
Qi, Q.2
Lewis, K.3
-
24
-
-
77955628762
-
Persister cells
-
Lewis K. 2010. Persister cells. Annu. Rev. Microbiol. 64:357-372.
-
(2010)
Annu. Rev. Microbiol.
, vol.64
, pp. 357-372
-
-
Lewis, K.1
-
25
-
-
17144416850
-
Persister cells and the riddle of biofilm survival
-
DOI 10.1007/s10541-005-0111-6
-
Lewis K. 2005. Persister cells and the riddle of biofilm survival. Biochemistry (Mosc.) 70:267-274. (Pubitemid 40512338)
-
(2005)
Biochemistry (Moscow)
, vol.70
, Issue.2
, pp. 267-274
-
-
Lewis, K.1
-
26
-
-
0033819140
-
Programmed death in bacteria
-
Lewis K. 2000. Programmed death in bacteria. Microbiol. Mol. Biol. Rev. 64:503-514.
-
(2000)
Microbiol. Mol. Biol. Rev.
, vol.64
, pp. 503-514
-
-
Lewis, K.1
-
28
-
-
0020590028
-
hipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis
-
Moyed HS, Bertrand KP. 1983. hipA, a newly recognized gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis. J. Bacteriol. 155:768-775. (Pubitemid 13048115)
-
(1983)
Journal of Bacteriology
, vol.155
, Issue.2
, pp. 768-775
-
-
Moyed, H.S.1
Bertrand, K.P.2
-
29
-
-
0022591020
-
Molecular cloning and expression of hipA, a gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis
-
Moyed HS, Broderick SH. 1986. Molecular cloning and expression of hipA, a gene of Escherichia coli K-12 that affects frequency of persistence after inhibition of murein synthesis. J. Bacteriol. 166:399-403. (Pubitemid 16112134)
-
(1986)
Journal of Bacteriology
, vol.166
, Issue.2
, pp. 399-403
-
-
Moyed, H.S.1
Broderick, S.H.2
-
30
-
-
77957947243
-
Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis
-
Mulcahy LR, Burns JL, Lory S, Lewis K. 2010. Emergence of Pseudomonas aeruginosa strains producing high levels of persister cells in patients with cystic fibrosis. J. Bacteriol. 192:6191-6199.
-
(2010)
J. Bacteriol.
, vol.192
, pp. 6191-6199
-
-
Mulcahy, L.R.1
Burns, J.L.2
Lory, S.3
Lewis, K.4
-
31
-
-
0028960382
-
Roles of nitric oxide in inducible resistance of Escherichia coli to activated murine macrophages
-
Nunoshiba T, DeRojas-Walker T, Tannenbaum SR, Demple B. 1995. Roles of nitric oxide in inducible resistance of Escherichia coli to activated murine macrophages. Infect. Immun. 63:794-798.
-
(1995)
Infect. Immun.
, vol.63
, pp. 794-798
-
-
Nunoshiba, T.1
DeRojas-Walker, T.2
Tannenbaum, S.R.3
Demple, B.4
-
32
-
-
14244266086
-
Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes
-
DOI 10.1093/nar/gki201
-
Pandey DP, Gerdes K. 2005. Toxin-antitoxin loci are highly abundant in free-living but lost from host-associated prokaryotes. Nucleic Acids Res. 33:966-976. (Pubitemid 41430517)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.3
, pp. 966-976
-
-
Pandey, D.P.1
Gerdes, K.2
-
33
-
-
0036067108
-
Rapid induction and reversal of a bacteriostatic condition by controlled expression of toxins and antitoxins
-
DOI 10.1046/j.1365-2958.2002.03027.x
-
Pedersen K, Christensen SK, Gerdes K. 2002. Rapid induction and reversal of a bacteriostatic condition by controlled expression of toxins and antitoxins. Mol. Microbiol. 45:501-510. (Pubitemid 34779839)
-
(2002)
Molecular Microbiology
, vol.45
, Issue.2
, pp. 501-510
-
-
Pedersen, K.1
Christensen, S.K.2
Gerdes, K.3
-
34
-
-
0035985625
-
Global adjustment of microbial physiology during free radical stress
-
DOI 10.1016/S0065-2911(02)46007-9
-
Pomposiello PJ, Demple B. 2002. Global adjustment of microbial physiology during free radical stress. Adv. Microb. Physiol. 46:319-341. (Pubitemid 34602245)
-
(2002)
Advances in Microbial Physiology
, vol.46
, pp. 319-341
-
-
Pomposiello, P.J.1
Demple, B.2
-
35
-
-
58449087611
-
Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB
-
Schumacher MA, et al. 2009. Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science 323:396-401.
-
(2009)
Science
, vol.323
, pp. 396-401
-
-
Schumacher, M.A.1
-
36
-
-
33747436591
-
Persisters: A distinct physiological state of E. coli
-
Shah D, Zhang Z, Khodursky AB, Kaldalu N, Kurg K, Lewis K. 2006. Persisters: a distinct physiological state of E. coli. BMC Microbiol. 6:53.
-
(2006)
BMC Microbiol.
, vol.6
, pp. 53
-
-
Shah, D.1
Zhang, Z.2
Khodursky, A.B.3
Kaldalu, N.4
Kurg, K.5
Lewis, K.6
-
37
-
-
0035173818
-
Biofilms and planktonic cells of Pseudomonas aeruginosa have similar resistance to killing by antimicrobials
-
DOI 10.1128/JB.183.23.6746-6751.2001
-
Spoering AL, Lewis K. 2001. Biofilms and planktonic cells of Pseudomonas aeruginosa have similar resistance to killing by antimicrobials. J. Bacteriol. 183:6746-6751. (Pubitemid 33064186)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.23
, pp. 6746-6751
-
-
Spoering, A.L.1
Lewis, K.2
-
38
-
-
0033673079
-
Sensing and protecting against superoxide stress in Escherichia coli-how many ways are there to trigger soxRS response?
-
Touati D. 2000. Sensing and protecting against superoxide stress in Escherichia coli-how many ways are there to trigger soxRS response? Redox Rep. 5:287-293.
-
(2000)
Redox Rep.
, vol.5
, pp. 287-293
-
-
Touati, D.1
-
39
-
-
51649129121
-
A small SOS-induced toxin is targeted against the inner membrane in Escherichia coli
-
Unoson C, Wagner EG. 2008. A small SOS-induced toxin is targeted against the inner membrane in Escherichia coli. Mol. Microbiol. 70:258-270.
-
(2008)
Mol. Microbiol.
, vol.70
, pp. 258-270
-
-
Unoson, C.1
Wagner, E.G.2
-
40
-
-
33646549559
-
Increased persistence in Escherichia coli caused by controlled expression of toxins or other unrelated proteins
-
DOI 10.1128/JB.188.10.3494-3497.2006
-
Vázquez-Laslop N, Lee H, Neyfakh AA. 2006. Increased persistence in Escherichia coli caused by controlled expression of toxins or other unrelated proteins. J. Bacteriol. 188:3494-3497. (Pubitemid 43726213)
-
(2006)
Journal of Bacteriology
, vol.188
, Issue.10
, pp. 3494-3497
-
-
Vazquez-Laslop, N.1
Lee, H.2
Neyfakh, A.A.3
-
41
-
-
65649104513
-
Contribution of oxidative damage to antimicrobial lethality
-
Wang X, Zhao X. 2009. Contribution of oxidative damage to antimicrobial lethality. Antimicrob. Agents Chemother. 53:1395-1402.
-
(2009)
Antimicrob. Agents Chemother.
, vol.53
, pp. 1395-1402
-
-
Wang, X.1
Zhao, X.2
-
42
-
-
33746415885
-
A comprehensive library of fluorescent transcriptional reporters for Escherichia coli
-
DOI 10.1038/nmeth895, PII NMETH895
-
Zaslaver A, et al. 2006. A comprehensive library of fluorescent transcriptional reporters for Escherichia coli. Nat. Methods 3:623-628. (Pubitemid 44123429)
-
(2006)
Nature Methods
, vol.3
, Issue.8
, pp. 623-628
-
-
Zaslaver, A.1
Bren, A.2
Ronen, M.3
Itzkovitz, S.4
Kikoin, I.5
Shavit, S.6
Liebermeister, W.7
Surette, M.G.8
Alon, U.9
-
43
-
-
0033991496
-
Redox sensing by prokaryotic transcription factors
-
Zheng M, Storz G. 2000. Redox sensing by prokaryotic transcription factors. Biochem. Pharmacol. 59:1-6.
-
(2000)
Biochem. Pharmacol.
, vol.59
, pp. 1-6
-
-
Zheng, M.1
Storz, G.2
|