Transferability of SSR and RGA Markers Developed in Cynodon spp. to Zoysia spp

Plant Molecular Biology Reporter

Volumn 30, Issue 5, 2012, Pages 1264-1269

  Harris Shultz, Karen R ^a   Milla Lewis, Susana R ^b   Brady, Jeff A ^c  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b NORTH CAROLINA STATE UNIVERSITY   (United States)

^c TEXAS A AND M UNIVERSITY   (United States)

Author keywords

Bermudagrass; Cross taxa amplification; Diversity; Microsatellite; Zoysiagrass

Indexed keywords

CHLORIDOIDEAE; CYNODON (ANGIOSPERM); ZOYSIA JAPONICA; ZOYSIA MATRELLA;

EID: 84865413600     PISSN: 07359640     EISSN: 15729818     Source Type: Journal    
DOI: 10.1007/s11105-012-0417-7     Document Type: Article

References (42)

1. Anonymous (1952) Release of 'Meyer' Zoysia to state experiment stations. USGA J Turf Mgt 5: 26-27.
2. Arumuganathan K, Tallury SP, Fraser ML, Bruneau AH, Wu R (1999) Nuclear DNA content of thirteen turfgrass species by flow cytometry. Crop Sci 39: 1518-1521.
3. Beard JB, Sifers SI (1997) Genetic diversity in dehydration avoidance and drought resistance within the Cynodon and Zoysia species. Intl Turfgrass Soc Res J 8: 603-610.
4. Boutin-Ganache I, Raposo M, Raymond M, Deschepper CF (2001) M13-tailed primers improve the readability and usability of microsatellite analyses performed with two different allele-sizing methods. BioTechniques 31: 25-28.
5. Budak H, Shearman RC, Gaussoin RE, Dweikat I (2004a) Application of sequence-related amplified polymorphism markers for characterization of turfgrass species. HortScience 39: 955-958.
6. Budak H, Shearman RC, Parmaksiz I, Dweikat I (2004b) Comparative analysis of seeded and vegetative biotype buffalograsses based on phylogenetic relationships using ISSRs, SSRs, RAPDs, and SRAPs. Theor Appl Genet 109: 280-288.
7. Budak H, Shearman RC, Dweikat I (2005) Evolution of Buchloe dactyloides based on cloning and sequencing of matK, rbcL, and cob genes from plastid and mitochondrial genomes. Genome 48: 411-416.
8. Burton GW (1966) Tifway (Tifton 419) Bermudagrass. Crop Sci 6: 93-94.
9. Cai H, Inoue M, Yuyama N, Takahashi W, Hirata M, Sasaki T (2005) Isolation, characterization and mapping of simple sequence repeat markers in zoysiagrass (Zoysia spp.). Theor Appl Genet 112: 158-166.
10. Chen Z, Wang ML, Waltz C, Raymer P (2009) Genetic diversity of warm-season turfgrass: seashore paspalum, bermudagrass, and zoysiagrass revealed by AFLPs. Floriculture Ornamental Biotechnol 3: 20-24.
11. Clayton WD, Renvoize SA (1986) Genera graminum. HMSO publications, London.
12. Columbus JT, Cerros-Tlatilpa R, Kinney MS, Siquerios-Delgado ME, Bell HL, Griffith MP, Refulio-Rodriguez NF (2007) Phylogenetics of Chloridoideae (Gramineae): a preliminary study based on nuclear ribosomal internal transcribed spacer and chloroplast trnL-F sequences. Aliso 23: 565-579.
13. Decroocq V, Fave MG, Hagen L, Bordenave L, Decroocq S (2003) Development and transferability of apricot and grape EST microsatellite markers across taxa. Theor Appl Genet 106: 912-922.
14. Dice LR (1945) Measure of the amount of ecologic association between species. Ecology 26: 297-302.
15. Doguet D (2002a) Zoysiagrass plant named 'JaMur'. Plant Patent PP13178. U. S. Patent and Trademark Office, Washington, DC.
16. Doguet D (2002b) Zoysiagrass plant named 'Zeon'. Plant Patent PP13166. U. S. Patent and Trademark Office, Washington, DC.
17. Engelke MC, Colbaugh PF, Reinert JA, Marcum KB, White RH, Ruemmele B, Anderson SJ (2002) Registration of 'Diamond' zoysiagrass. Crop Sci 42: 304-305.
18. Forbes I (1952) Chromosome numbers and hybrids in Zoysia. Agron J 44: 147-151.
19. Forbes I, Robinson BP, Latham JM (1955) Emerald zoysia: an improved hybrid lawn grass for the south. USGA J Turf Mgt 8: 23-26.
20. Hampl V, Pavlícek A, Flegr J (2001) Construction and bootstrap analysis of DNA fingerprinting-based phylogenetic trees with a freeware program FreeTree: application to trichomonad parasites. Intl J Systematic Evol Microbiol 51: 731-735.
21. Hanna WW, Burton GW, Johnson AW (1990) Registration of 'Tifton10' turf bermudagrass. Crop Sci 30: 1355-1356.
22. Hanna WW (1998) The future of bermudagrass. Golf Course Mgt 66(9): 49-52.
23. Harris KR, Schwartz BM, Paterson AH, Brady JA (2010) Identification and mapping of NBS-LRR resistance gene analogs in bermudagrass. J Amer Soc Hort Sci 135: 74-82.
24. Harris-Shultz KR, Schwartz BM, Hanna WW, Brady JA (2010) Development, linkage mapping and utilization of microsatellites in bermudagrass. J Amer Soc Hort Sci 135: 511-520.
25. Harris-Shultz KR, Schwartz BM, Brady JA (2011) Identification of SSR markers that differentiate bermudagrass cultivars derived from 'Tifgreen'. J Amer Soc Hort Sci 136: 211-218.
26. Hilu KW, Alice LA (2001) A phylogeny of Chloridoideae (Poaceae) based on matK sequences. Systematic Bot 26: 386-405.
27. Housley DJ, Zalewski ZA, Beckett SE, Venta PJ (2006) Design factors that influence PCR amplification success of cross-species primers among 1147 mammalian primer pairs. BMC Genomics 7: 253.
28. Kamps TL, Williams NR, Ortega VM, Chamusco KC, Harris-Shultz KR, Scully BT, Chase CD (2011) DNA polymorphisms at bermudagrass microsatellite loci and their use in genotype fingerprinting. Crop Sci 51: 1-10.
29. Kim C, Jang CS, Kamps TL, Robertson JS, Feltus FA, Paterson AH (2008) Transcriptome analysis of leaf tissue from bermudagrass (Cynodon dactylon) using a normalized cDNA library. Functional Plant Biol 35: 585-594.
30. Kim C, Tang H, Paterson AH (2009) Duplication and divergence of grass genomes: integrating the chloridoids. Tropical Plant Biol 2: 51-62.
31. Kimball JA, Zuleta MC, Kenworthy KE, Lehman VG, Milla-Lewis SR (2011) Assesment of genetic diversity in Zoysia spp. using AFLP markers. Crop Sci 52(1): 360-370. doi: 10. 2135/cropsci2011. 05. 0252.
32. Kitamura F (1970) Studies on the horticultural classification and development of Japanese lawn grasses. Bull Kemigawa Arbor Fac Agric Univ Tokyo 3: 1-60.
33. Li M, Yuyama N, Hirata M, Wang Y, Han J, Cai H (2010) An integrated SSR-based linkage map for Zoysia matrella L. and Z. japonica Steud. Mol Breeding 26: 467-476.
34. McHale L, Tan X, Koehl P, Michelmore RW (2006) Plant NBS-LRR proteins: adaptable guards. Genome Biol 7: 212.
35. Patton AJ (2009) Selecting zoysiagrass cultivars: turfgrass quality, growth, pest and environmental stress tolerance. Applied Turfgrass Sci. doi: 10. 1094/ATS-2009-1019-01-MG.
36. Palmer JD, Jansen RK, Michaels HJ, Chase MW, Manhart JR (1988) Chloroplast DNA variation and plant phylogeny. Ann Mo Bot Gard 75: 1180-1206.
37. Pejic I, Ajmone-Marsan P, Morgante M, Kozumplick V, Castiglioni P, Taramino G, Motto M (1998) Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theor Appl Genet 97: 1248-1255.
38. Rohlf FJ (2008) NTSYSpc: numerical taxonomy system, ver. 2. 20. Exeter Publishing, Ltd, Setauket.
39. Tan C, Wu Y, Taliaferro CM, Anderson MP, Tauer C, Samuels T (2010) Development of simple sequence repeat markers for bermudagrass from its expressed sequence tag sequences and preexisting sorghum SSR markers. Mol Breeding. doi: 10. 1007/s11032-010-9521-2.
40. University of Georgia (2010) UGA acquires zoyiagrass collection. http://news. uga. edu/releases/article/uga-acquires-zoysiagrass-collection. Accessed 11 October 2011.
41. Varshney RK, Kumar A, Balyan HS, Roy JK, Prasad M, Gupta PK (2000) Characterization of microsatellites and development of chromosome specific STMS markers in bread wheat. Plant Mol Biol Rep 18: 5-16.
42. Yaneshita M, Ohmura T, Sasakuma T, Ogihara Y (1993) Phylogenetic relationships of turfgrasses as revealed by restriction fragment analysis of chloroplast DNA. Theor Appl Genet 87: 129-135.