-
1
-
-
0033609147
-
Phylogeny of a rapidly evolving clade: The cichlid fishes of Lake Malawi, East Africa
-
Albertson, R. C., Markert, J. A., Danley, P. D. and Kocher, T. D. (1996). Phylogeny of a rapidly evolving clade: The cichlid fishes of Lake Malawi, East Africa. Proc. Natl. Acad. Sci. USA 96 5107-5110.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.96
, pp. 5107-5110
-
-
Albertson, R.C.1
Markert, J.A.2
Danley, P.D.3
Kocher, T.D.4
-
2
-
-
0026443745
-
Phylogenies from restriction sites: A maximum-likelihood approach
-
Felsenstein, J. (1992). Phylogenies from restriction sites: A maximum-likelihood approach. Evolution 46 159-173.
-
(1992)
Evolution
, vol.46
, pp. 159-173
-
-
Felsenstein, J.1
-
3
-
-
0003991673
-
-
Sinauer Associates, Inc., Sunderland, MA
-
Felsenstein, J. (2004). Inferring Phylogenies 251-256. Sinauer Associates, Inc., Sunderland, MA.
-
(2004)
Inferring Phylogenies
, pp. 251-256
-
-
Felsenstein, J.1
-
4
-
-
84865392475
-
-
Downloaded in May, 2007
-
FlyBase (2007). http://flybase.bio.indiana.edu. Downloaded in May, 2007.
-
(2007)
FlyBase
-
-
-
5
-
-
84972492387
-
Inference from iterative simulation using multiple sequences
-
Gelman, A. and Rubin, D. B. (1992). Inference from iterative simulation using multiple sequences. Statist. Sci. 7 457-511.
-
(1992)
Statist. Sci.
, vol.7
, pp. 457-511
-
-
Gelman, A.1
Rubin, D.B.2
-
6
-
-
77956889087
-
Reversible jump Markov chain Monte Carlo computation and Bayesian model determination
-
Green, P. J. (1995). Reversible jump Markov chain Monte Carlo computation and Bayesian model determination. Biometrika 82 711-732.
-
(1995)
Biometrika
, vol.82
, pp. 711-732
-
-
Green, P.J.1
-
7
-
-
0346641850
-
Trans-dimensional Markov chain Monte Carlo
-
In, (P. J. Green, N. L. Hjort and S. Richardson, eds.). Oxford Univ. Press, Oxford
-
Green, P. J. (2003). Trans-dimensional Markov chain Monte Carlo. In Highly Structured Stochastic Systems (P. J. Green, N. L. Hjort and S. Richardson, eds.) 179-198. Oxford Univ. Press, Oxford.
-
(2003)
Highly Structured Stochastic Systems
, pp. 179-198
-
-
Green, P.J.1
-
8
-
-
33747060544
-
Chromosome number changes associated with speciation in sedges: A phylogenetic study in Carex section Ovales (Cyperaceae) using AFLP data
-
In, (J. T. Columbus, E. A. Friar, J. M. Porter, L. M. Prince and M. G. Simpson, eds.). Rancho Santa Ana Botanic Garden, Claremont, CA
-
Hipp, A. L., Rothrock, P. E., Reznicek, A. A. and Berry, P. E. (2006). Chromosome number changes associated with speciation in sedges: A phylogenetic study in Carex section Ovales (Cyperaceae) using AFLP data. In Monocots: Comparative Biology and Evolution (J. T. Columbus, E. A. Friar, J. M. Porter, L. M. Prince and M. G. Simpson, eds.). Rancho Santa Ana Botanic Garden, Claremont, CA.
-
(2006)
Monocots: Comparative Biology and Evolution
-
-
Hipp, A.L.1
Rothrock, P.E.2
Reznicek, A.A.3
Berry, P.E.4
-
9
-
-
0034849408
-
MRBAYES: Bayesian inference of phylogenetic trees
-
Huelsenbeck, J. P. and Ronquist, F. (2001). MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17 754-755.
-
(2001)
Bioinformatics
, vol.17
, pp. 754-755
-
-
Huelsenbeck, J.P.1
Ronquist, F.2
-
10
-
-
0001488651
-
Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories
-
Jones, C. J., Edwards, K. J., Castaglione, S., Winfield, M. O., Sala, F., van de Wiel, C., Bredemeijer, G., Vosman, B., Matthes, M., Daly, A., Brettschneider, R., Bettini, P., Buiatti, M., Maestri, E., Malcevschi, A., Marmiroli, N., Aert, R., Volckaert, G., Rueda, J., Linacero, R., Vazquez, A. and Karp, A. (1997). Reproducibility testing of RAPD, AFLP and SSR markers in plants by a network of European laboratories. Molecular Breeding 3 381-390.
-
(1997)
Molecular Breeding
, vol.3
, pp. 381-390
-
-
Jones, C.J.1
Edwards, K.J.2
Castaglione, S.3
Winfield, M.O.4
Sala, F.5
van de Wiel, C.6
Bredemeijer, G.7
Vosman, B.8
Matthes, M.9
Daly, A.10
Brettschneider, R.11
Bettini, P.12
Buiatti, M.13
Maestri, E.14
Malcevschi, A.15
Marmiroli, N.16
Aert, R.17
Volckaert, G.18
Rueda, J.19
Linacero, R.20
Vazquez, A.21
Karp, A.22
more..
-
11
-
-
0000732090
-
Evolution of protein molecules
-
In (H. N. Munro, ed.). Academic Press, New York
-
Jukes, T. H. and Cantor, C. R. (1969). Evolution of protein molecules. InMammalian Protein Metabolism Vol. 3 (H. N. Munro, ed.) 21-132. Academic Press, New York.
-
(1969)
Mammalian Protein Metabolism
, vol.3
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
13
-
-
34247359152
-
A Bayesian model of AFLP marker evolution and phylogenetic inference
-
Article 11
-
Luo, R., Hipp, A. and Larget, B. (2007). A Bayesian model of AFLP marker evolution and phylogenetic inference. Statist. Appl. Genet. Mol. Biol. 6Article 11.
-
(2007)
Statist. Appl. Genet. Mol. Biol.
, vol.6
-
-
Luo, R.1
Hipp, A.2
Larget, B.3
-
15
-
-
0031498410
-
Phylogenetic inference for binary data on dendograms using Markov chain Monte Carlo
-
Mau, B. and Newton, M. A. (1997). Phylogenetic inference for binary data on dendograms using Markov chain Monte Carlo. J. Comput. Graph. Statist. 6122-131.
-
(1997)
J. Comput. Graph. Statist.
, vol.6
, pp. 122-131
-
-
Mau, B.1
Newton, M.A.2
-
16
-
-
1542510093
-
A "long indel" model for evolutionary sequence alignment
-
Miklós, I., Lunter, G. A. and Holmes, I. (2004). A "long indel" model for evolutionary sequence alignment. Mol. Biol. Evol. 21 529-540.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 529-540
-
-
Miklós, I.1
Lunter, G.A.2
Holmes, I.3
-
17
-
-
84865386238
-
-
Downloaded in May, 2007
-
NCBI (2007). http://www.ncbi.nlm.nih.gov/Genomes/. Downloaded in May, 2007.
-
(2007)
NCBI
-
-
-
18
-
-
7844227430
-
The comparison of RFLP, RAPD, AFLP and SSR markers for germplasm analysis
-
Powell, W., Morgante, M., Andre, C., Hanafey, M., Vogel, J., Tingey, S. and Rafalski, A. (1996). The comparison of RFLP, RAPD, AFLP and SSR markers for germplasm analysis. Molecular Breeding 2 225-238.
-
(1996)
Molecular Breeding
, vol.2
, pp. 225-238
-
-
Powell, W.1
Morgante, M.2
Andre, C.3
Hanafey, M.4
Vogel, J.5
Tingey, S.6
Rafalski, A.7
-
19
-
-
22844450838
-
Joint Bayesian estimation of alignment and phylogeny
-
Redelings, B. D. and Suchard, M. A. (2005). Joint Bayesian estimation of alignment and phylogeny. Systematic Biology 54 401-418.
-
(2005)
Systematic Biology
, vol.54
, pp. 401-418
-
-
Redelings, B.D.1
Suchard, M.A.2
-
20
-
-
0027157960
-
Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees
-
Tamura, K. and Nei, M. (1993). Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10 512-526.
-
(1993)
Mol. Biol. Evol.
, vol.10
, pp. 512-526
-
-
Tamura, K.1
Nei, M.2
-
21
-
-
0026079507
-
An evolutionary model for maximum likelihood alignment of DNA sequences
-
Thorne, J. L., Kishino, H. and Felsenstein, J. (1991). An evolutionary model for maximum likelihood alignment of DNA sequences. Journal of Molecular Evolution 33 114-124.
-
(1991)
Journal of Molecular Evolution
, vol.33
, pp. 114-124
-
-
Thorne, J.L.1
Kishino, H.2
Felsenstein, J.3
-
22
-
-
0026528734
-
Inching toward reality: An improved likelihood model of sequence evolution
-
Thorne, J. L., Kishino, H. and Felsenstein, J. (1992). Inching toward reality: An improved likelihood model of sequence evolution. Journal of Molecular Evolution 34 3-16.
-
(1992)
Journal of Molecular Evolution
, vol.34
, pp. 3-16
-
-
Thorne, J.L.1
Kishino, H.2
Felsenstein, J.3
-
23
-
-
0000576595
-
Markov chains for exploring posterior distributions
-
Tierney, L. (1994). Markov chains for exploring posterior distributions. Ann. Statist. 22 1701-1728.
-
(1994)
Ann. Statist.
, vol.22
, pp. 1701-1728
-
-
Tierney, L.1
-
24
-
-
0028834605
-
AFLP: A new technique for DNA fingerprinting
-
Vos, P., Hogers, R., Bleeker, M., Reijans, M., van de Lee, T., Hornes, M., Frijters, A., Pot, J., Peleman, J., Kuiper, M. and Zabeau, M. (1995). AFLP: A new technique for DNA fingerprinting. Nucleic Acids Research 23 4407-4414.
-
(1995)
Nucleic Acids Research
, vol.23
, pp. 4407-4414
-
-
Vos, P.1
Hogers, R.2
Bleeker, M.3
Reijans, M.4
van de Lee, T.5
Hornes, M.6
Frijters, A.7
Pot, J.8
Peleman, J.9
Kuiper, M.10
Zabeau, M.11
-
26
-
-
0027132974
-
Maximum likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites
-
Yang, Z. (1993). Maximum likelihood estimation of phylogeny from DNA sequences when substitution rates differ over sites. Mol. Biol. Evol. 101396-1401.
-
(1993)
Mol. Biol. Evol.
, vol.101
, pp. 396-401
-
-
Yang, Z.1
-
27
-
-
0028064845
-
Maximum likelihood estimation of phylogeny from DNA sequences with variable rates over sites: Approximate methods
-
Yang, Z. (1994). Maximum likelihood estimation of phylogeny from DNA sequences with variable rates over sites: Approximate methods. Journal of Computational Evolution 39 306-314.
-
(1994)
Journal of Computational Evolution
, vol.39
, pp. 306-314
-
-
Yang, Z.1
|