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Volumn 422, Issue 2, 2012, Pages 300-309

Single-molecule imaging on living bacterial cell surface by high-speed AFM

Author keywords

live cell imaging; molecular dynamics; molecular resolution; porin; scanning probe microscopy

Indexed keywords

GLUTARALDEHYDE; POLYLYSINE; PORIN;

EID: 84864856920     PISSN: 00222836     EISSN: 10898638     Source Type: Journal    
DOI: 10.1016/j.jmb.2012.05.018     Document Type: Article
Times cited : (109)

References (48)
  • 1
    • 69249213558 scopus 로고    scopus 로고
    • Cryo-electron tomography of bacteria: Progress, challenges and future prospects
    • Milne J.L.S., and Subramaniam S. Cryo-electron tomography of bacteria: progress, challenges and future prospects Nat. Rev., Microbiol. 7 2009 666 675
    • (2009) Nat. Rev., Microbiol. , vol.7 , pp. 666-675
    • Milne, J.L.S.1    Subramaniam, S.2
  • 3
    • 79960630264 scopus 로고    scopus 로고
    • Central dogma at the single-molecule level in living cells
    • Li G.W., and Xie X.S. Central dogma at the single-molecule level in living cells Nature 475 2011 308 315
    • (2011) Nature , vol.475 , pp. 308-315
    • Li, G.W.1    Xie, X.S.2
  • 4
    • 74049084879 scopus 로고    scopus 로고
    • Single-molecule imaging techniques to visualize chemotactic signaling events on the membrane of living Dictyostelium cells
    • Miyanaga Y., Matsuoka S., and Ueda M. Single-molecule imaging techniques to visualize chemotactic signaling events on the membrane of living Dictyostelium cells Methods Mol. Biol. 571 2009 417 435
    • (2009) Methods Mol. Biol. , vol.571 , pp. 417-435
    • Miyanaga, Y.1    Matsuoka, S.2    Ueda, M.3
  • 6
    • 49649113590 scopus 로고    scopus 로고
    • Towards nanomicrobiology using atomic force microscopy
    • Dufrêne Y.F. Towards nanomicrobiology using atomic force microscopy Nat. Rev., Microbiol. 6 2008 674 680
    • (2008) Nat. Rev., Microbiol. , vol.6 , pp. 674-680
    • Dufrêne, Y.F.1
  • 7
    • 77949378431 scopus 로고    scopus 로고
    • Atomic force microscopy: Probing the spatial organization, interactions and elasticity of microbial cell envelopes at molecular resolution
    • Scheuring S., and Dufrêne Y.F. Atomic force microscopy: probing the spatial organization, interactions and elasticity of microbial cell envelopes at molecular resolution Mol. Microbiol. 75 2010 1327 1336
    • (2010) Mol. Microbiol. , vol.75 , pp. 1327-1336
    • Scheuring, S.1    Dufrêne, Y.F.2
  • 8
    • 69949127771 scopus 로고    scopus 로고
    • In vivo imaging of S-layer nanoarrays on Corynebacterium glutamicum
    • Dupres V., Alsteens D., Pauwels K., and Dufrêne Y.F. In vivo imaging of S-layer nanoarrays on Corynebacterium glutamicum Langmuir 25 2009 9653 9655
    • (2009) Langmuir , vol.25 , pp. 9653-9655
    • Dupres, V.1    Alsteens, D.2    Pauwels, K.3    Dufrêne, Y.F.4
  • 12
    • 54149113310 scopus 로고    scopus 로고
    • High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes
    • Ando T., Uchihashi T., and Fukuma T. High-speed atomic force microscopy for nano-visualization of dynamic biomolecular processes Prog. Surf. Sci. 83 2008 337 437
    • (2008) Prog. Surf. Sci. , vol.83 , pp. 337-437
    • Ando, T.1    Uchihashi, T.2    Fukuma, T.3
  • 14
    • 80052514287 scopus 로고    scopus 로고
    • Traffic jams reduce hydrolytic efficiency of cellulase on cellulose surface
    • Igarashi K., Uchihashi T., Koivula A., Wada M., Kimura S., and Okamoto T. Traffic jams reduce hydrolytic efficiency of cellulase on cellulose surface Science 333 2011 1279 1282
    • (2011) Science , vol.333 , pp. 1279-1282
    • Igarashi, K.1    Uchihashi, T.2    Koivula, A.3    Wada, M.4    Kimura, S.5    Okamoto, T.6
  • 16
    • 78149285270 scopus 로고    scopus 로고
    • Video imaging of walking myosin v by high-speed atomic force microscopy
    • Kodera N., Yamamoto D., Ishikawa R., and Ando T. Video imaging of walking myosin V by high-speed atomic force microscopy Nature 468 2010 72 76
    • (2010) Nature , vol.468 , pp. 72-76
    • Kodera, N.1    Yamamoto, D.2    Ishikawa, R.3    Ando, T.4
  • 17
    • 77749324964 scopus 로고    scopus 로고
    • High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin
    • Shibata M., Yamashita H., Uchihashi T., Kandori H., and Ando T. High-speed atomic force microscopy shows dynamic molecular processes in photoactivated bacteriorhodopsin Nat. Nanotechnol. 5 2010 208 212
    • (2010) Nat. Nanotechnol. , vol.5 , pp. 208-212
    • Shibata, M.1    Yamashita, H.2    Uchihashi, T.3    Kandori, H.4    Ando, T.5
  • 18
    • 79955510966 scopus 로고    scopus 로고
    • Structural changes in bacteriorhodopsin in response to alternate illumination observed by high-speed atomic force microscopy
    • Shibata M., Uchihashi T., Yamashita H., Kandori H., and Ando T. Structural changes in bacteriorhodopsin in response to alternate illumination observed by high-speed atomic force microscopy Angew. Chem., Int. Ed. Engl. 50 2011 4410 4413
    • (2011) Angew. Chem., Int. Ed. Engl. , vol.50 , pp. 4410-4413
    • Shibata, M.1    Uchihashi, T.2    Yamashita, H.3    Kandori, H.4    Ando, T.5
  • 20
    • 33845766325 scopus 로고    scopus 로고
    • Deep-etching electron microscopy of cells of Magnetospirillum magnetotacticum: Evidence for filamentous structures connecting the magnetosome chain to the cell surface
    • DOI 10.1007/s00284-005-0221-9
    • Martins J.L., Keim C.N., Farina M., Kachar B., and Lins U. Deep-etching electron microscopy of cells of Magnetospirillum magnetotacticum: evidence for filamentous structures connecting the magnetosome chain to the cell surface Curr. Microbiol. 54 2007 1 4 (Pubitemid 44974333)
    • (2007) Current Microbiology , vol.54 , Issue.1 , pp. 1-4
    • Martins, J.L.1    Keim, C.N.2    Farina, M.3    Kachar, B.4    Lins, U.5
  • 22
    • 0024803851 scopus 로고
    • Translational diffusion of class II major histocompatibility complex molecules is constrained by their cytoplasmic domains
    • DOI 10.1083/jcb.109.6.3325
    • Wade W.F., Freed J.H., and Edidin M. Translational diffusion of class II major histocompatibility complex molecules is constrained by their cytoplasmic domains J. Cell Biol. 109 1989 3325 3331 (Pubitemid 20017982)
    • (1989) Journal of Cell Biology , vol.109 , Issue.II6 , pp. 3325-3331
    • Wade, W.F.1    Freed, J.H.2    Edidin, M.3
  • 23
    • 0030953956 scopus 로고    scopus 로고
    • Single-particle tracking: The distribution of diffusion coefficients
    • Saxton M.J. Single-particle tracking: the distribution of diffusion coefficients Biophys. J. 72 1997 1744 1753 (Pubitemid 27133113)
    • (1997) Biophysical Journal , vol.72 , Issue.4 , pp. 1744-1753
    • Saxton, M.J.1
  • 24
    • 0026692177 scopus 로고
    • Reproducible imaging and dissection of plasmid DNA under liquid with the atomic force microscope
    • Hansma H.G., Vesenka J., Siegerist C., Kelderman G., Morrett H., and Sinsheimer R.L. Reproducible imaging and dissection of plasmid DNA under liquid with the atomic force microscope Science 256 1992 1180 1184
    • (1992) Science , vol.256 , pp. 1180-1184
    • Hansma, H.G.1    Vesenka, J.2    Siegerist, C.3    Kelderman, G.4    Morrett, H.5    Sinsheimer, R.L.6
  • 25
    • 0027163746 scopus 로고
    • Structure of the extracellular surface of the gap junction by atomic force microscopy
    • Hoh J.H., Sosinsky G.E., Revel J.P., and Hansma P.K. Structure of the extracellular surface of the gap junction by atomic force microscopy Biophys. J. 65 1993 149 163 (Pubitemid 23206048)
    • (1993) Biophysical Journal , vol.65 , Issue.1 , pp. 149-163
    • Hoh, J.H.1    Sosinsky, G.E.2    Revel, J.-P.3    Hansma, P.K.4
  • 26
    • 70450198123 scopus 로고    scopus 로고
    • High-resolution architecture of the outer membrane of the Gram-negative bacteria Roseobacter denitrificans
    • Jaroslawski S., Duquesne K., Sturgis J.N., and Scheuring S. High-resolution architecture of the outer membrane of the Gram-negative bacteria Roseobacter denitrificans Mol. Microbiol. 74 2009 1211 1222
    • (2009) Mol. Microbiol. , vol.74 , pp. 1211-1222
    • Jaroslawski, S.1    Duquesne, K.2    Sturgis, J.N.3    Scheuring, S.4
  • 27
    • 27844484656 scopus 로고    scopus 로고
    • Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1
    • DOI 10.1093/dnares/dsi002
    • Matsunaga T., Okamura Y., Fukuda Y., Wahyudi A.T., Murase Y., and Takeyama H. Complete genome sequence of the facultative anaerobic magnetotactic bacterium Magnetospirillum sp. strain AMB-1 DNA Res. 12 2005 157 166 (Pubitemid 43731361)
    • (2005) DNA Research , vol.12 , Issue.3 , pp. 157-166
    • Matsunaga, T.1    Okamura, Y.2    Fukuda, Y.3    Wahyudi, A.T.4    Murase, Y.5    Takeyama, H.6
  • 28
    • 33749652084 scopus 로고    scopus 로고
    • Origin of magnetosome membrane: Proteomic analysis of magnetosome membrane and comparison with cytoplasmic membrane
    • DOI 10.1002/pmic.200500887
    • Tanaka M., Okamura Y., Arakaki A., Tanaka T., Takeyama H., and Matsunaga T. Origin of magnetosome membrane: proteomic analysis of magnetosome membrane and comparison with cytoplasmic membrane Proteomics 6 2006 5234 5247 (Pubitemid 44549992)
    • (2006) Proteomics , vol.6 , Issue.19 , pp. 5234-5247
    • Tanaka, M.1    Okamura, Y.2    Arakaki, A.3    Tanaka, T.4    Takeyama, H.5    Matsunaga, T.6
  • 29
    • 44949235393 scopus 로고    scopus 로고
    • Development of a cell surface display system in a magnetotactic bacterium, Magnetospirillum magneticum AMB-1
    • DOI 10.1128/AEM.02276-07
    • Tanaka M., Nakata Y., Mori T., Okamura Y., Miyasaka H., Takeyama H., and Matsunaga T. Development of a cell surface display system in a magnetotactic bacterium, Magnetospirillum magneticum AMB-1 Appl. Environ. Microbiol. 74 2008 3342 3348 (Pubitemid 351812787)
    • (2008) Applied and Environmental Microbiology , vol.74 , Issue.11 , pp. 3342-3348
    • Tanaka, M.1    Nakata, Y.2    Mori, T.3    Okamura, Y.4    Miyasaka, H.5    Takeyama, H.6    Matsunaga, T.7
  • 30
    • 0037064291 scopus 로고    scopus 로고
    • The structure of bacterial outer membrane proteins
    • DOI 10.1016/S0005-2736(02)00577-1, PII S0005273602005771
    • Schulz G.E. T0068e structure of bacterial outer membrane proteins Biochim. Biophys. Acta 1565 2002 308 317 (Pubitemid 35284483)
    • (2002) Biochimica et Biophysica Acta - Biomembranes , vol.1565 , Issue.2 , pp. 308-317
    • Schulz, G.E.1
  • 31
    • 0033942874 scopus 로고    scopus 로고
    • Structure and function of bacterial outer membrane proteins: Barrels in a nutshell
    • DOI 10.1046/j.1365-2958.2000.01983.x
    • Koebnik R., Locher K.P., and Van Gelder P. Structure and function of bacterial outer membrane proteins: barrels in a nutshell Mol. Microbiol. 37 2000 239 253 (Pubitemid 30481009)
    • (2000) Molecular Microbiology , vol.37 , Issue.2 , pp. 239-253
    • Koebnik, R.1    Locher, K.P.2    Van Gelder, P.3
  • 32
    • 34249889315 scopus 로고    scopus 로고
    • Nanoscale compositional mapping with gentle forces
    • DOI 10.1038/nmat1925, PII NMAT1925
    • Garcia R., Magerle R., and Perez R. Nanoscale compositional mapping with gentle forces Nat. Mater. 6 2007 405 411 (Pubitemid 46869990)
    • (2007) Nature Materials , vol.6 , Issue.6 , pp. 405-411
    • Garcia, R.1    Magerle, R.2    Perez, R.3
  • 34
    • 33645210489 scopus 로고    scopus 로고
    • Identification and characterization of the genes encoding a unique surface (S-) layer of Tannerella forsythia
    • Lee S.W., Sabet M., Um H.S., Yang J., Kim H.C., and Zhu W. Identification and characterization of the genes encoding a unique surface (S-) layer of Tannerella forsythia Gene 371 2006 102 111
    • (2006) Gene , vol.371 , pp. 102-111
    • Lee, S.W.1    Sabet, M.2    Um, H.S.3    Yang, J.4    Kim, H.C.5    Zhu, W.6
  • 36
    • 79960924956 scopus 로고    scopus 로고
    • Atomic force microscopy: A nanoscopic window on the cell surface
    • Muller D.J., and Dufrêne Y.F. Atomic force microscopy: a nanoscopic window on the cell surface Trends Cell Biol. 21 2011 461 469
    • (2011) Trends Cell Biol. , vol.21 , pp. 461-469
    • Muller, D.J.1    Dufrêne, Y.F.2
  • 37
    • 0037783430 scopus 로고    scopus 로고
    • Nanoscale mapping of the elasticity of microbial cells by atomic force microscopy
    • Touhami A., Nysten B., and Dufrêne Y.F. Nanoscale mapping of the elasticity of microbial cells by atomic force microscopy Langmuir 19 2003 4539 4543
    • (2003) Langmuir , vol.19 , pp. 4539-4543
    • Touhami, A.1    Nysten, B.2    Dufrêne, Y.F.3
  • 38
    • 33845781556 scopus 로고    scopus 로고
    • Atomic force microscopy of microbial cells: Application to nanomechanical properties, surface forces and molecular recognition forces
    • DOI 10.1016/j.colsurfb.2006.09.014, PII S0927776506002931
    • Gaboriaud F., and Dufrêne Y.F. Atomic force microscopy of microbial cells: application to nanomechanical properties, surface forces and molecular recognition forces Colloids Surf., B 54 2007 10 19 (Pubitemid 46014412)
    • (2007) Colloids and Surfaces B: Biointerfaces , vol.54 , Issue.1 , pp. 10-19
    • Gaboriaud, F.1    Dufrene, Y.F.2
  • 39
    • 0030012459 scopus 로고    scopus 로고
    • Modeling and measuring the elastic properties of an archaeal surface, the sheath of Methanospirillum hungatei, and the implication for methane production
    • Xu W., Mulhern P.J., Blackford B.L., Jericho M.H., Firtel M., and Beveridge T.J. Modeling and measuring the elastic properties of an archaeal surface, the sheath of Methanospirillum hungatei, and the implication of methane production J. Bacteriol. 178 1996 3106 3112 (Pubitemid 26169351)
    • (1996) Journal of Bacteriology , vol.178 , Issue.11 , pp. 3106-3112
    • Xu, W.1    Mulhern, P.J.2    Blackford, B.L.3    Jericho, M.H.4    Firtel, M.5    Beveridge, T.J.6
  • 40
    • 0036362080 scopus 로고    scopus 로고
    • Measuring the elastic properties of living cells by the atomic force microscope
    • Radmacher M. Measuring the elastic properties of living cells by the atomic force microscope Methods Cell. Biol. 68 2002 67 90 (Pubitemid 44558303)
    • (2002) Methods in Cell Biology , vol.2002 , Issue.68 , pp. 67-90
    • Radmacher, M.1
  • 41
    • 0028276694 scopus 로고
    • Surface morphology and mechanical properties of MDCK monolayers by atomic force microscopy
    • Hoh J.H., and Schoenenberger C.A. Surface morphology and mechanical properties of MDCK monolayers by atomic force microscopy J. Cell Sci. 107 1994 1105 1114 (Pubitemid 24177313)
    • (1994) Journal of Cell Science , vol.107 , Issue.5 , pp. 1105-1114
    • Hoh, J.H.1    Schoenenberger, C.-A.2
  • 42
    • 0030053843 scopus 로고    scopus 로고
    • Measuring the viscoelastic properties of human platelets with the atomic force microscope
    • Radmacher M., Fritz M., Kacher C.M., Cleveland J.P., and Hansma P.K. Measuring the viscoelastic properties of human platelets with the atomic force microscope Biophys. J. 70 1996 556 567 (Pubitemid 26021495)
    • (1996) Biophysical Journal , vol.70 , Issue.1 , pp. 556-567
    • Radmacher, M.1    Fritz, M.2    Kacher, C.M.3    Cleveland, J.P.4    Hansma, P.K.5
  • 43
    • 0018630025 scopus 로고
    • Isolation and pure culture of a freshwater magnetic spirillum in chemically defined medium
    • Blakemore R.P., Maratea D., and Wolfe R.S. Isolation and pure culture of a freshwater magnetic spirillum in chemically defined medium J. Bacteriol. 140 1979 720 729 (Pubitemid 10170130)
    • (1979) Journal of Bacteriology , vol.140 , Issue.2 , pp. 720-729
    • Blakemore, R.P.1    Maratea, D.2    Wolfe, R.S.3
  • 44
  • 45
    • 79961130248 scopus 로고    scopus 로고
    • Comparative analysis of phosphoprotein expression using 2D-DIGE
    • Asano T., and Nishiuchi T. Comparative analysis of phosphoprotein expression using 2D-DIGE Methods Mol. Biol. 744 2011 225 233
    • (2011) Methods Mol. Biol. , vol.744 , pp. 225-233
    • Asano, T.1    Nishiuchi, T.2
  • 46
    • 0016439201 scopus 로고
    • Isolation and characterization of two outer membrane preparations from Escherichia coli
    • Mizushima S., and Yamada H. Isolation and characterization of two outer membrane preparations from Escherichia coli Biochim. Biophys. Acta 375 1975 44 53
    • (1975) Biochim. Biophys. Acta , vol.375 , pp. 44-53
    • Mizushima, S.1    Yamada, H.2
  • 47
    • 0014949207 scopus 로고
    • Cleavage of structural proteins during the assembly of the head of bacteriophage T4
    • Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4 Nature 227 1970 680 685
    • (1970) Nature , vol.227 , pp. 680-685
    • Laemmli, U.K.1
  • 48
    • 33744722808 scopus 로고    scopus 로고
    • Spatial localizations of Mam22 and Mam12 in the magnetosomes of Magnetospirillum magnetotacticum
    • DOI 10.1128/JB.00020-06
    • Taoka A., Asada R., Sasaki H., Anzawa K., Wu L.F., and Fukumori Y. Spatial localizations of Mam22 and Mam12 in the magnetosomes of Magnetospirillum magnetotacticum J. Bacteriol. 188 2006 3805 3812 (Pubitemid 43825386)
    • (2006) Journal of Bacteriology , vol.188 , Issue.11 , pp. 3805-3812
    • Taoka, A.1    Asada, R.2    Sasaki, H.3    Anzawa, K.4    Wu, L.-F.5    Fukumori, Y.6


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