Functional importance of short-range binding and long-range solvent interactions in helical antifreeze peptides

Biophysical Journal

Volumn 103, Issue 2, 2012, Pages

  Ebbinghaus, Simon ^a   Meister, Konrad ^a   Prigozhin, Maxim B ^b   Devries, Arthur L ^b   Havenith, Martina ^a   Dzubiella, Joachim ^d   Gruebele, Martin ^b,c  

^a RUHR UNIVERSITY BOCHUM   (Germany)

^b UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^c University of Illinois at Urbana Champaign   (United States)

^d HUMBOLDT UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIFREEZE PROTEIN; BUFFER; SOLVENT; WATER;

ABSORPTION; AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHEMISTRY; CIRCULAR DICHROISM; FLOUNDER; FLUORESCENCE RESONANCE ENERGY TRANSFER; FREEZING; GENETICS; METABOLISM; MOLECULAR DYNAMICS; MOLECULAR GENETICS; MUTATION; PROTEIN BINDING; PROTEIN SECONDARY STRUCTURE;

ABSORPTION; AMINO ACID SEQUENCE; ANIMALS; ANTIFREEZE PROTEINS; BUFFERS; CIRCULAR DICHROISM; FLOUNDER; FLUORESCENCE RESONANCE ENERGY TRANSFER; FREEZING; MOLECULAR DYNAMICS SIMULATION; MOLECULAR SEQUENCE DATA; MUTATION; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; SOLVENTS; WATER;

PSEUDOPLEURONECTES AMERICANUS;

EID: 84864752132     PISSN: 00063495     EISSN: 15420086     Source Type: Journal    
DOI: 10.1016/j.bpj.2012.06.013     Document Type: Article

References (13)

1. A.L. Devries, and Y. Lin Structure of a peptide antifreeze and mechanism of adsorption to ice Biochim. Biophys. Acta 495 1977 388 392
2. J.A. Raymond, and A.L. DeVries Adsorption inhibition as a mechanism of freezing resistance in polar fishes Proc. Natl. Acad. Sci. USA 74 1977 2589 2593
3. H.M. Chao, and M.E. Houston Jr. F.D. Sönnichsen A diminished role for hydrogen bonds in antifreeze protein binding to ice Biochemistry 36 1997 14652 14660
4. S.N. Patel, and S.P. Graether Structures and ice-binding faces of the alanine-rich type I antifreeze proteins Biochem. Cell Biol. 88 2010 223 229
5. S. Ebbinghaus, and K. Meister M. Havenith Antifreeze glycoprotein activity correlates with long-range protein-water dynamics J. Am. Chem. Soc. 132 2010 12210 12211
6. M.M. Harding, L.G. Ward, and A.D. Haymet Type I 'antifreeze' proteins. Structure-activity studies and mechanisms of ice growth inhibition Eur. J. Biochem. 264 1999 653 665
7. N. Li, C.A. Andorfer, and J.G. Duman Enhancement of insect antifreeze protein activity by solutes of low molecular mass J. Exp. Biol. 201 1998 2243 2251
8. D.A. Case, and T.A. Darden P.A. Kollman AMBER9 2006 University of California San Francisco, CA
9. H.J.C. Berendsen, J.R. Grigera, and T.P. Straatsma The missing term in effective pair potentials J. Phys. Chem. A 91 1987 6269
10. W. Kabsch, and C. Sander Dictionary of protein secondary structure: pattern recognition of hydrogen-bonded and geometrical features Biopolymers 22 1983 2577 2637
11. S. Ebbinghaus, and S.J. Kim M. Havenith An extended dynamical hydration shell around proteins Proc. Natl. Acad. Sci. USA 104 2007 20749 20752
12. A. Bergner, and U. Heugen E.E. Haller New p-Ge THz laser spectrometer for the study of solutions: THz absorption spectroscopy of water Rev. Sci. Instrum. 76 2005 63110
13. N.M. Tsvetkova, and B.L. Phillips Y. Yeh Dynamics of antifreeze glycoproteins in the presence of ice Biophys. J. 82 2002 464 473