A tale of two species: Molecular data reveal the chemotypes of Lepraria normandinoides (Stereocaulaceae) to be two sympatric species

Journal of the Torrey Botanical Society

Volumn 139, Issue 2, 2012, Pages 118-130

  Lendemer, James C ^a,b  

^a INSTITUTE OF SYSTEMATIC BOTANY   (United States)

^b CITY UNIVERSITY OF NEW YORK   (United States)

Author keywords

Chemotaxonomy; cryptic species; semi cryptic species; species concepts

Indexed keywords

CHEMOTAXONOMY; DATA SET; DICOTYLEDON; MOLECULAR ANALYSIS; MORPHOLOGY; ORGANIC ACID; POPULATION STRUCTURE; SYMPATRY;

LEPRARIA; STEREOCAULACEAE;

EID: 84864666182     PISSN: 10955674     EISSN: None     Source Type: Journal    
DOI: 10.3159/TORREY-D-11-00059.1     Document Type: Article

References (28)

1. AKAIKE, H. 1973. Information theory and an extension of the maximum likelihood principle, p. 267-281. In B. N. Petrov and F. Csaki eds., Proc. 2nd Int. Symp. Inf. Theory. Akademiai Kiado, Budapest, HU.
2. ALTSCHUL, S., T. L. MADDEN, A. A. SCHAFFER, J. ZHANG, Z. ZHANG, W. MILLER, AND D. J. LIPMAN. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402. (Pubitemid 27359211)
3. EKMAN, S. AND T. TøNSBERG. 2002. Most species of Lepraria and Leproloma form a monophyletic group closely related to Stereocaulon. Mycol. Res. 106: 1262-1276. (Pubitemid 36010824)
4. ESSLINGER, T. L. 2010. A cumulative checklist for the lichen-forming, lichenicolous and allied fungi of the continental United States and Canada. North Dakota State University: http://www.ndsu.edu/pubweb/,esslinge/chcklst/ chcklst7.htm (First Posted 1 December 1997, Most Recent Version (#16) 18 June 2010), Fargo, ND.
5. FEHRER, J., S. SLAV́iKOVA-BAYEROVÁ, AND A. ORANGE. 2008. Large genetic divergence of new, morphologically similar species of sterile lichens from Europe (Lepraria, Stereocaulaceae, Asco-mycota): concordance of DNA sequence data with secondary metabolites. Cladistics 24: 443-458.
6. FELSENSTEIN, J. 1985. Confidence limits on phylog-enies: An approach using the bootstrap. Evolution 39: 783-791.
7. GAYA, E., F. LUTZONI, S. ZOLLER, AND P. NAVARRO-ROSINÉS. 2003. Phylogenetic study of Fulgensia and allied Caloplaca, and Xanthoria species (Teloschistaceae, lichen-forming Ascomycota). Am. J. Bot. 90: 1095-1103. (Pubitemid 36914631)
8. HODKINSON, B. P. AND J. C. LENDEMER. 2011. Molecular analyses reveal cryptic species in Xanthoparmelia tasmanica. Bibliotheca Licheno-logica 106: 108-119.
9. HODKINSON, B. P. AND F. LUTZONI. 2009. A microbiotic survey of lichen-associated bacteria reveals a new lineage from the Rhizobiales. Symbiosis 49: 163-180.
10. HUELSENBECK, J. P. AND F. RONQUIST. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17: 754-755. (Pubitemid 32851390)
11. LAUNDON, J. R. 1992. Lepraria in the British Isles. Lichenologist 24: 315-350.
12. LENDEMER, J. C. 2011a. A taxonomic revision of the North American species of Lepraria s.l. that produce divaricatic acid, with notes on the type species of the genus L. incana. Mycologia 103: 1216-1229.
13. LENDEMER, J. C. 2011. A standardized morphological terminology and descriptive scheme for Lepraria (Stereocaulaceae). The Lichenologist 43: 379-399.
14. LENDEMER, J. C. 2010. Notes on the genus Lepraria s.l. (Lichenized Ascomycetes) in North America: new species, new reports, and preliminary keys. Brittonia 62: 267-292.
15. LENDEMER, J. C. AND J. A. ELIX. 2010. Two new species of Chrysothrix from eastern North America. Opuscula Philolichenum 8: 51-58.
16. LENDEMER, J. C. AND R. C. HARRIS. 2007. Lepraria normandinoides, a new widespread species from Eastern North America. Opuscula Philolichenum 4: 45-50.
17. LENDEMER, J. C. AND H. O'BRIEN. 2011. How do you reconcile molecular and non-molecular datasets? A case study where new molecular data prompts a revision of Peltigera hydrothyria s.l. in North America and the recognition of two species. Opuscula Philolichenum 9: 99-110.
18. MADDISON, W. P. AND D. R. MADDISON. 2007. Mesquite: A modular system for evolutionary analysis (ver. 2.0). http://mesquiteproject.org.
19. MIADLIKOWSKA, J., B. MCCUNE, AND F. LUTZONI. 2002. Pseudocyphellaria perpetua, a new lichen from western North America. The Bryologist 105: 1-10. (Pubitemid 34271309)
20. NELSEN, M. P., R. LÜCKING, L. UMAÑA, M. T. TREST, S. WILL-WOLF, J. L. CHAVES, AND A. GARGAS. 2007. Multiclavula ichthyiformis (Fungi: Basidiomycota: Cantharellales: Clavulinaceae), a remarkable new basidiolichen from Costa Rica. Am. J. Bot. 94: 1289-1296.
21. NYLANDER, J. A. A. 2004. MrModeltest v2.-Program distributed by the author. Evolutionary Biology Centre, Uppsala University, SE.
22. PÉREZ-ORTEGA, S. AND T. SPRIBILLE. 2009. Lepraria torii, a new epiphytic species with fumarprotoce-traric acid from northwest North America. Graphis Scripta 21: 36-41.
23. SAAG, L., A. SAAG, AND T. RANDLANE. 2009. World survey of the genus Lepraria (Stereocaulaceae, lichenized Ascomycota). Lichenologist 41: 25-60.
24. SLAV́iKOVÁ-BAYEROVÁ, S. AND J. FEHRER. 2007. New species of the Lepraria neglecta group (Stereo-caulaceae, Ascomycota) from Europe. Lichenol-ogist 39: 319-327. (Pubitemid 47093081)
25. THOMPSON, J. D., T. J. GIBSON, F. PLEWNIAK, F. JEANMOUGIN, AND D. G. HIGGINS. 1997. The CLUSTAL-X Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25: 4876-4882.
26. TøNSBERG, T. 2007. Notes on the lichen genus Lepraria in Great Smoky Mountains National Park, southeastern North America: Lepraria lanata and L. salazinica spp. nov. Opuscula Philolichenum 4: 51-54.
27. TRETIACH, M., L. MUGGIA, AND L. BARUFFO. 2009. Species delimitation in the Lepraria isidiata-L. santosii group: a population study in the Mediterranean-Macaronesian region. Lichenolo-gist 41: 1-15.
28. WHITE, T. J., T. D. BRUNS, S. LEE, AND J. TAYLOR. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, p. 315-322. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White eds., PCR Protocols: a guide to methods and applications. Academic Press, San Diego, CA.