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Volumn 62, Issue 9, 2012, Pages 2264-2271

Rhizobium grahamii sp. nov., from nodules of dalea leporina, leucaena leucocephala and clitoria ternatea, and rhizobium mesoamericanum sp. nov., from nodules of phaseolus vulgaris, siratro, cowpea and mimosa pudica

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CENTRAL AMERICA; CLITORIA TERNATEA; COWPEA; DALEA LEPORINA; DNA DNA HYBRIDIZATION; GENE SEQUENCE; LEUCAENA LEUCOCEPHALA; MEXICO; MIMOSA PUDICA; NODULATION; NONHUMAN; NUCLEOTIDE SEQUENCE; PHASEOLUS VULGARIS; PHENOTYPE; PHYLOGENY; PLANT; PRIORITY JOURNAL; RHIZOBIUM; RHIZOBIUM GRAHAMII; RHIZOBIUM MESOAMERICANUM; UNINDEXED SEQUENCE;

EID: 84864621892     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.033555-0     Document Type: Article
Times cited : (56)

References (38)
  • 1
    • 33144458430 scopus 로고    scopus 로고
    • Coexistence of Burkholderia, Cupriavidus, and Rhizobium sp. nodule bacteria on two Mimosa spp. in Costa Rica
    • Barrett, C. F. & Parker, M. A. (2006). Coexistence of Burkholderia, Cupriavidus, and Rhizobium sp. nodule bacteria on two Mimosa spp. in Costa Rica. Appl Environ Microbiol 72, 1198-1206.
    • (2006) Appl Environ Microbiol , vol.72 , pp. 1198-1206
    • Barrett, C.F.1    Parker, M.A.2
  • 3
    • 33847735471 scopus 로고    scopus 로고
    • Phylogeny of the genus Phaseolus (Leguminosae): A recent diversification in an ancient landscape
    • Delgado-Salinas, A., Bibler, R. & Lavin, M. (2006). Phylogeny of the genus Phaseolus (Leguminosae): a recent diversification in an ancient landscape. Syst Bot 31, 779-791.
    • (2006) Syst Bot , vol.31 , pp. 779-791
    • Delgado-Salinas, A.1    Bibler, R.2    Lavin, M.3
  • 6
    • 0026652405 scopus 로고
    • Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and nifH genes
    • Eardly, B. D., Young, J. P. W. & Selander, R. K. (1992). Phylogenetic position of Rhizobium sp. strain Or 191, a symbiont of both Medicago sativa and Phaseolus vulgaris, based on partial sequences of the 16S rRNA and nifH genes. Appl Environ Microbiol 58, 1809-1815.
    • (1992) Appl Environ Microbiol , vol.58 , pp. 1809-1815
    • Eardly, B.D.1    Young, J.P.W.2    Selander, R.K.3
  • 7
    • 77950806408 scopus 로고    scopus 로고
    • New algorithms andmethods to estimatemaximumlikelihood phylogenies: Assessing the performance of PhyML 3.0
    • Guindon, S., Dufayard, J.-F., Lefort, V., Anisimova, M., Hordijk, W. & Gascuel, O. (2010).New algorithms andmethods to estimatemaximumlikelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol 59, 307-321.
    • (2010) Syst Biol , vol.59 , pp. 307-321
    • Guindon, S.1    Dufayard, J.-F.2    Lefort, V.3    Anisimova, M.4    Hordijk, W.5    Gascuel, O.6
  • 8
    • 0002051540 scopus 로고    scopus 로고
    • BioEdit: A user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
    • Hall, T. A. (1999). BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucleic Acids Symp Ser 41, 95-98.
    • (1999) Nucleic Acids Symp Ser , vol.41 , pp. 95-98
    • Hall, T.A.1
  • 9
    • 52449101577 scopus 로고    scopus 로고
    • Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, China
    • Han, T. X., Wang, E. T., Wu, L. J., Chen, W. F., Gu, J. G., Gu, C. T., Tian, C. F. & Chen, W. X. (2008). Rhizobium multihospitium sp. nov., isolated from multiple legume species native of Xinjiang, China. Int J Syst Evol Microbiol 58, 1693-1699.
    • (2008) Int J Syst Evol Microbiol , vol.58 , pp. 1693-1699
    • Han, T.X.1    Wang, E.T.2    Wu, L.J.3    Chen, W.F.4    Gu, J.G.5    Gu, C.T.6    Tian, C.F.7    Chen, W.X.8
  • 10
    • 0029055540 scopus 로고
    • Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L
    • Herná ndez-Lucas, I., Segovia, L., Martínez-Romero, E. & Pueppke, S. G. (1995). Phylogenetic relationships and host range of Rhizobium spp. that nodulate Phaseolus vulgaris L. Appl Environ Microbiol 61, 2775-2779.
    • (1995) Appl Environ Microbiol , vol.61 , pp. 2775-2779
    • Herná ndez-Lucas, I.1    Segovia, L.2    Martínez-Romero, E.3    Pueppke, S.G.4
  • 12
    • 72149119728 scopus 로고    scopus 로고
    • Rhizobium tibeticum sp. nov., a symbiotic bacterium isolated from Trigonella archiducis-nicolai (Sirj.) Vassilcz
    • Hou, B. C., Wang, E. T., Li, Y., Jr, Jia, R. Z., Chen, W. F., Gao, Y., Dong, R. J. & Chen, W. X. (2009). Rhizobium tibeticum sp. nov., a symbiotic bacterium isolated from Trigonella archiducis-nicolai (Sirj.) Vassilcz. Int J Syst Evol Microbiol 59, 3051-3057.
    • (2009) Int J Syst Evol Microbiol , vol.59 , pp. 3051-3057
    • Hou, B.C.1    Wang, E.T.2    Li Jr., Y.3    Jia, R.Z.4    Chen, W.F.5    Gao, Y.6    Dong, R.J.7    Chen, W.X.8
  • 13
    • 0033830496 scopus 로고    scopus 로고
    • Isolation and characterization of new efficient and competitive bean (Phaseolus vulgaris L.) rhizobia from Brazil
    • Hungria, M., Andrade, D. S., Chueire, L. M. O., Probanza, A., Guttierrez-Mañero, F. J. & Megías, M. (2000). Isolation and characterization of new efficient and competitive bean (Phaseolus vulgaris L.) rhizobia from Brazil. Soil Biol Biochem 32, 1515-1528.
    • (2000) Soil Biol Biochem , vol.32 , pp. 1515-1528
    • Hungria, M.1    Andrade, D.S.2    Chueire, L.M.O.3    Probanza, A.4    Guttierrez-Mañero, F.J.5    Megías, M.6
  • 15
    • 77956886547 scopus 로고    scopus 로고
    • Phaseolus vulgaris seed-borne endophytic community with novel bacterial species such as Rhizobium endophyticum sp. nov
    • López-López, A., Rogel, M. A., Ormeño-Orrillo, E., Martínez-Romero, J. & Martínez-Romero, E. (2010a). Phaseolus vulgaris seed-borne endophytic community with novel bacterial species such as Rhizobium endophyticum sp. nov. Syst Appl Microbiol 33, 322-327.
    • (2010) Syst Appl Microbiol , vol.33 , pp. 322-327
    • López-López, A.1    Rogel, M.A.2    Ormeño-Orrillo, E.3    Martínez-Romero, J.4    Martínez-Romero, E.5
  • 17
    • 0021800113 scopus 로고
    • Reiteration of nitrogen fixation gene sequences and specificity of Rhizobium in nodulation and nitrogen fixation in Phaseolus vulgaris
    • Martínez, E., Pardo, M. A., Palacios, R. & Cevallos, M. A. (1985). Reiteration of nitrogen fixation gene sequences and specificity of Rhizobium in nodulation and nitrogen fixation in Phaseolus vulgaris. J Gen Microbiol 131, 1779-1786.
    • (1985) J Gen Microbiol , vol.131 , pp. 1779-1786
    • Martínez, E.1    Pardo, M.A.2    Palacios, R.3    Cevallos, M.A.4
  • 18
    • 17644445149 scopus 로고    scopus 로고
    • Diversity of Rhizobium-Phaseolus vulgaris symbiosis: Overview and perspectives
    • Martínez-Romero, E. (2003). Diversity of Rhizobium-Phaseolus vulgaris symbiosis: overview and perspectives. Plant Soil 252, 11-23.
    • (2003) Plant Soil , vol.252 , pp. 11-23
    • Martínez-Romero, E.1
  • 19
    • 0025308765 scopus 로고
    • Increased bean (Phaseolus vulgaris L.) nodulation competitiveness of genetically modified Rhizobium strains
    • Martínez-Romero, E. & Rosenblueth, M. (1990). Increased bean (Phaseolus vulgaris L.) nodulation competitiveness of genetically modified Rhizobium strains. Appl Environ Microbiol 56, 2384-2388.
    • (1990) Appl Environ Microbiol , vol.56 , pp. 2384-2388
    • Martínez-Romero, E.1    Rosenblueth, M.2
  • 22
    • 9644301241 scopus 로고    scopus 로고
    • Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
    • Posada, D. & Buckley, T. R. (2004). Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Syst Biol 53, 793-808.
    • (2004) Syst Biol , vol.53 , pp. 793-808
    • Posada, D.1    Buckley, T.R.2
  • 24
    • 59949090259 scopus 로고    scopus 로고
    • De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae
    • Reinhardt, J. A., Baltrus, D. A., Nishimura, M. T., Jeck, W. R., Jones, C. D. & Dangl, J. L. (2009). De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae. Genome Res 19, 294-305.
    • (2009) Genome Res , vol.19 , pp. 294-305
    • Reinhardt, J.A.1    Baltrus, D.A.2    Nishimura, M.T.3    Jeck, W.R.4    Jones, C.D.5    Dangl, J.L.6
  • 26
    • 57449094971 scopus 로고    scopus 로고
    • Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanum
    • Rincón-Rosales, R., Lloret, L., Ponce, E. & Martínez-Romero, E. (2009). Rhizobia with different symbiotic efficiencies nodulate Acaciella angustissima in Mexico, including Sinorhizobium chiapanecum sp. nov. which has common symbiotic genes with Sinorhizobium mexicanum. FEMS Microbiol Ecol 67, 103-117.
    • (2009) FEMS Microbiol Ecol , vol.67 , pp. 103-117
    • Rincón-Rosales, R.1    Lloret, L.2    Ponce, E.3    Martínez-Romero, E.4
  • 28
    • 0027447968 scopus 로고
    • Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov
    • Segovia, L., Young, J. P. W. & Martínez-Romero, E. (1993). Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov. Int J Syst Bacteriol 43, 374-377.
    • (1993) Int J Syst Bacteriol , vol.43 , pp. 374-377
    • Segovia, L.1    Young, J.P.W.2    Martínez-Romero, E.3
  • 29
    • 33646167708 scopus 로고    scopus 로고
    • Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes
    • Silva, C., Vinuesa, P., Eguiarte, L. E., Souza, V. & Martínez-Romero, E. (2005). Evolutionary genetics and biogeographic structure of Rhizobium gallicum sensu lato, a widely distributed bacterial symbiont of diverse legumes. Mol Ecol 14, 4033-4050.
    • (2005) Mol Ecol , vol.14 , pp. 4033-4050
    • Silva, C.1    Vinuesa, P.2    Eguiarte, L.E.3    Souza, V.4    Martínez-Romero, E.5
  • 30
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 31
    • 0034023713 scopus 로고    scopus 로고
    • Analysis of cellular fatty acids and phenotypic relationships of Agrobacterium, Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium species using the Sherlock Microbial Identification System
    • Tighe, S. W., de Lajudie, P., Dipietro, K., Lindström, K., Nick, G. & Jarvis, B. D. (2000). Analysis of cellular fatty acids and phenotypic relationships of Agrobacterium, Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium species using the Sherlock Microbial Identification System. Int J Syst Evol Microbiol 50, 787-801.
    • (2000) Int J Syst Evol Microbiol , vol.50 , pp. 787-801
    • Tighe, S.W.1    de Lajudie, P.2    Dipietro, K.3    Lindström, K.4    Nick, G.5    Jarvis, B.D.6
  • 32
    • 0037367045 scopus 로고    scopus 로고
    • Sinorhizobium americanus sp. nov., a new Sinorhizobium species nodulating native Acacia spp. in Mexico
    • Toledo, I., Lloret, L. & Martínez-Romero, E. (2003). Sinorhizobium americanus sp. nov., a new Sinorhizobium species nodulating native Acacia spp. in Mexico. Syst Appl Microbiol 26, 54-64.
    • (2003) Syst Appl Microbiol , vol.26 , pp. 54-64
    • Toledo, I.1    Lloret, L.2    Martínez-Romero, E.3
  • 36
    • 0031853141 scopus 로고    scopus 로고
    • Rhizobium huautlense sp. nov., a symbiont of Sesbania herbacea that has a close phylogenetic relationship with Rhizobium galegae
    • Wang, E. T., van Berkum, P., Beyene, D., Sui, X. H., Dorado, O., Chen, W. X. & Martínez-Romero, E. (1998). Rhizobium huautlense sp. nov., a symbiont of Sesbania herbacea that has a close phylogenetic relationship with Rhizobium galegae. Int J Syst Bacteriol 48, 687-699.
    • (1998) Int J Syst Bacteriol , vol.48 , pp. 687-699
    • Wang, E.T.1    van Berkum, P.2    Beyene, D.3    Sui, X.H.4    Dorado, O.5    Chen, W.X.6    Martínez-Romero, E.7
  • 37
    • 80355132413 scopus 로고    scopus 로고
    • Rhizobium vallis sp. nov., isolated from nodules of three leguminous species
    • Wang, F., Wang, E. T., Wu, L. J., Sui, X. H., Li, Y., Jr & Chen, W. X. (2011). Rhizobium vallis sp. nov., isolated from nodules of three leguminous species. Int J Syst Evol Microbiol 61, 2582-2588.
    • (2011) Int J Syst Evol Microbiol , vol.61 , pp. 2582-2588
    • Wang, F.1    Wang, E.T.2    Wu, L.J.3    Sui, X.H.4    Li Jr., Y.5    Chen, W.X.6
  • 38
    • 43149115851 scopus 로고    scopus 로고
    • Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
    • Zerbino, D. R. & Birney, E. (2008). Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res 18, 821-829.
    • (2008) Genome Res , vol.18 , pp. 821-829
    • Zerbino, D.R.1    Birney, E.2


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