-
1
-
-
60149091189
-
Regulation of translation initiation in eukaryotes: Mechanisms and biological targets
-
Sonenberg, N. and Hinnebusch, A.G. (2009) Regulation of translation initiation in eukaryotes: mechanisms and biological targets. Cell, 136, 731-745.
-
(2009)
Cell
, vol.136
, pp. 731-745
-
-
Sonenberg, N.1
Hinnebusch, A.G.2
-
2
-
-
0000831271
-
MRNA 50 cap-binding protein eLF4E and control of cell growth
-
Hershey, J.W.B., Matthews, M.B. and Sonenberg, N. (eds) Cold Spring Harbour, NY
-
Sonenberg, N. (1996) mRNA 50 cap-binding protein elF4E and control of cell growth. In: Hershey, J.W.B., Matthews, M.B. and Sonenberg, N. (eds), Translational Control. Cold Spring Harbour Laboratory Press, Cold Spring Harbour, NY, pp. 245-269.
-
(1996)
Translational Control. Cold Spring Harbour Laboratory Press
, pp. 245-269
-
-
Sonenberg, N.1
-
3
-
-
0029117427
-
Mapping of functional domains in eukaryotic protein synthesis initiation factor 4G (eIF4G) with picornaviral proteases
-
Lamphear, B.J., Kirchweger, R., Skern, T. and Rhoads, R.E. (1995) Mapping of functional domains in eukaryotic protein synthesis initiation factor 4G (eIF4G) with picornaviral proteases. J. Biol. Chem., 270, 21975-21983.
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 21975-21983
-
-
Lamphear, B.J.1
Kirchweger, R.2
Skern, T.3
Rhoads, R.E.4
-
4
-
-
0002523042
-
The pathway and mechanism of eukaryotic protein synthesis
-
Hershey, J.W.B., Matthews, B.F. and Sonenberg, N. (eds) Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Merrick, W.C. and Hershey, J.W.B. (1996) The pathway and mechanism of eukaryotic protein synthesis. In: Hershey, J.W.B., Matthews, B.F. and Sonenberg, N. (eds), Translational control. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY, pp. 31-70.
-
(1996)
Translational Control
, pp. 31-70
-
-
Merrick, W.C.1
Hershey, J.W.B.2
-
5
-
-
0023720048
-
Internal initiation of translation of eukaryotic messenger RNA directed by a sequence derived from poliovirus RNA
-
Pelletier, J. and Sonenberg, N. (1988) Internal initiation of translation of eukaryotic messenger RNA directed by a sequence derived from poliovirus RNA. Nature, 334, 320-325.
-
(1988)
Nature
, vol.334
, pp. 320-325
-
-
Pelletier, J.1
Sonenberg, N.2
-
6
-
-
0024500613
-
Initiation of protein-synthesis by internal entry of ribosomes into the 5' nontranslated region of encephalomyocarditis virus-RNA in vivo
-
Jang, S.K., Davies, M.V., Kaufman, R.J. and Wimmer, E. (1989) Initiation of protein-synthesis by internal entry of ribosomes into the 5' nontranslated region of encephalomyocarditis virus-RNA in vivo. J. Virol., 63, 1651-1660.
-
(1989)
J. Virol.
, vol.63
, pp. 1651-1660
-
-
Jang, S.K.1
Davies, M.V.2
Kaufman, R.J.3
Wimmer, E.4
-
7
-
-
0037112055
-
The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection
-
Pestova, T.V. and Kolupaeva, V.G. (2002) The roles of individual eukaryotic translation initiation factors in ribosomal scanning and initiation codon selection. Genes Dev., 16, 2906-2922.
-
(2002)
Genes Dev.
, vol.16
, pp. 2906-2922
-
-
Pestova, T.V.1
Kolupaeva, V.G.2
-
8
-
-
0025176473
-
Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F
-
Rozen, F., Edery, I., Meerovitch, K., Dever, T.E., Merrick, W.C. and Sonenberg, N. (1990) Bidirectional RNA helicase activity of eucaryotic translation initiation factors 4A and 4F. Mol. Cell. Biol., 10, 1134-1144.
-
(1990)
Mol. Cell. Biol.
, vol.10
, pp. 1134-1144
-
-
Rozen, F.1
Edery, I.2
Meerovitch, K.3
Dever, T.E.4
Merrick, W.C.5
Sonenberg, N.6
-
9
-
-
0021875798
-
ATP-dependent unwinding of messenger-RNA structure by eukaryotic initiation-factors
-
Ray, B.K., Lawson, T.G., Kramer, J.C., Cladaras, M.H., Grifo, J.A., Abramson, R.D., Merrick, W.C. and Thach, R.E. (1985) ATP-dependent unwinding of messenger-RNA structure by eukaryotic initiation-factors. J. Biol. Chem., 260, 7651-7658.
-
(1985)
J. Biol. Chem.
, vol.260
, pp. 7651-7658
-
-
Ray, B.K.1
Lawson, T.G.2
Kramer, J.C.3
Cladaras, M.H.4
Grifo, J.A.5
Abramson, R.D.6
Merrick, W.C.7
Thach, R.E.8
-
10
-
-
0037154965
-
Gene-specific regulation by general translation factors
-
Dever, T.E. (2002) Gene-specific regulation by general translation factors. Cell, 108, 545-556.
-
(2002)
Cell
, vol.108
, pp. 545-556
-
-
Dever, T.E.1
-
11
-
-
0025314596
-
Malignant transformation by eukaryotic initiation-factor subunit that binds to messenger-RNA 5' cap
-
Lazaris-Karatzas, A., Montine, K.S. and Sonenberg, N. (1990) Malignant transformation by eukaryotic initiation-factor subunit that binds to messenger-RNA 5' cap. Nature, 345, 544-547.
-
(1990)
Nature
, vol.345
, pp. 544-547
-
-
Lazaris-Karatzas, A.1
Montine, K.S.2
Sonenberg, N.3
-
12
-
-
1642586272
-
Survival signalling by akt and eif4e in oncogenesis and cancer therapy
-
Wendel, H.G., de Stanchina, E., Fridman, J.S., Malina, A., Ray, S., Kogan, S., Cordon-Cardo, C., Pelletier, J. and Lowe, S.W. (2004) Survival signalling by Akt and eIF4E in oncogenesis and cancer therapy. Nature, 428, 332-337.
-
(2004)
Nature
, vol.428
, pp. 332-337
-
-
Wendel, H.G.1
De Stanchina, E.2
Fridman, J.S.3
Malina, A.4
Ray, S.5
Kogan, S.6
Cordon-Cardo, C.7
Pelletier, J.8
Lowe, S.W.9
-
13
-
-
51849142315
-
Translational control and cancer therapy
-
Mavrakis, K.J. and Wendel, H.G. (2008) Translational control and cancer therapy. Cell Cycle, 7, 2791-2794.
-
(2008)
Cell Cycle
, vol.7
, pp. 2791-2794
-
-
Mavrakis, K.J.1
Wendel, H.G.2
-
14
-
-
77950002202
-
Translational control in cancer
-
Silvera, D., Formenti, S.C. and Schneider, R.J. (2010) Translational control in cancer. Nat. Rev. Cancer, 10, 254-266.
-
(2010)
Nat. Rev. Cancer
, vol.10
, pp. 254-266
-
-
Silvera, D.1
Formenti, S.C.2
Schneider, R.J.3
-
15
-
-
79960856696
-
Targeting translation dependence in cancer
-
Malina, A., Cencic, R. and Pelletier, J. (2011) Targeting translation dependence in cancer. Oncotarget, 2, 76-88.
-
(2011)
Oncotarget
, vol.2
, pp. 76-88
-
-
Malina, A.1
Cencic, R.2
Pelletier, J.3
-
16
-
-
23044457401
-
Stimulation of mammalian translation initiation factor eif4a activity by a small molecule inhibitor of eukaryotic translation
-
Bordeleau, M.E., Matthews, J., Wojnar, J.M., Lindqvist, L., Novac, O., Jankowsky, E., Sonenberg, N., Northcote, P., Teesdale-Spittlet, P. and Pelletier, J. (2005) Stimulation of mammalian translation initiation factor eIF4A activity by a small molecule inhibitor of eukaryotic translation. Proc. Natl Acad. Sci. USA, 102, 10460-10465.
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 10460-10465
-
-
Bordeleau, M.E.1
Matthews, J.2
Wojnar, J.M.3
Lindqvist, L.4
Novac, O.5
Jankowsky, E.6
Sonenberg, N.7
Northcote, P.8
Teesdale-Spittlet, P.9
Pelletier, J.10
-
17
-
-
0021099528
-
Identification and quantitation of levels of protein-synthesis initiation-factors in crude Hela-cell lysates by two-dimensional polyacrylamide-gel electrophoresis
-
Duncan, R. and Hershey, J.W.B. (1983) Identification and quantitation of levels of protein-synthesis initiation-factors in crude Hela-cell lysates by two-dimensional polyacrylamide-gel electrophoresis. J. Biol. Chem., 258, 7228-7235.
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 7228-7235
-
-
Duncan, R.1
Hershey, J.W.B.2
-
18
-
-
0036048086
-
Elf4a: The godfather of the DEAD box helicases
-
Rogers, G.W., Komar, A.A. and Merrick, W.C. (2002) ElF4A: The godfather of the DEAD box helicases. Prog. Nucleic Acid Res. Mol. Biol., 72, 307-331.
-
(2002)
Prog. Nucleic Acid Res. Mol. Biol.
, vol.72
, pp. 307-331
-
-
Rogers, G.W.1
Komar, A.A.2
Merrick, W.C.3
-
19
-
-
0040142238
-
Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A
-
Rogers, G.W., Richter, N.J. and Merrick, W.C. (1999) Biochemical and kinetic characterization of the RNA helicase activity of eukaryotic initiation factor 4A. J. Biol. Chem., 274, 12236-12244.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 12236-12244
-
-
Rogers, G.W.1
Richter, N.J.2
Merrick, W.C.3
-
20
-
-
0035903136
-
Modulation of the helicase activity of eif4a by eif4b, eif4h, and eif4f
-
Rogers, G.W., Richter, N.J., Lima, W.F. and Merrick, W.C. (2001) Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F. J. Biol. Chem., 276, 30914-30922.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 30914-30922
-
-
Rogers, G.W.1
Richter, N.J.2
Lima, W.F.3
Merrick, W.C.4
-
21
-
-
0033544894
-
Further biochemical and kinetic characterization of human eukaryotic initiation factor 4H
-
Richter, N.J., Rogers, G.W., Hensold, J.O. and Merrick, W.C. (1999) Further biochemical and kinetic characterization of human eukaryotic initiation factor 4H. J. Biol. Chem., 274, 35415-35424.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 35415-35424
-
-
Richter, N.J.1
Rogers, G.W.2
Hensold, J.O.3
Merrick, W.C.4
-
22
-
-
0032562239
-
The DEAD box protein eif4a. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide
-
Lorsch, J.R. and Herschlag, D. (1998) The DEAD box protein eIF4A. 1. A minimal kinetic and thermodynamic framework reveals coupled binding of RNA and nucleotide. Biochemistry, 37, 2180-2193.
-
(1998)
Biochemistry
, vol.37
, pp. 2180-2193
-
-
Lorsch, J.R.1
Herschlag, D.2
-
23
-
-
0032562221
-
The DEAD box protein eif4a. 2. A cycle of nucleotide and RNA-dependent conformational changes
-
Lorsch, J.R. and Herschlag, D. (1998) The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes. Biochemistry, 37, 2194-2206.
-
(1998)
Biochemistry
, vol.37
, pp. 2194-2206
-
-
Lorsch, J.R.1
Herschlag, D.2
-
24
-
-
34547595373
-
Spring-loaded mechanism of DNA unwinding by hepatitis C virus ns3 helicase
-
Myong, S., Bruno, M.M., Pyle, A.M. and Ha, T. (2007) Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase. Science, 317, 513-516.
-
(2007)
Science
, vol.317
, pp. 513-516
-
-
Myong, S.1
Bruno, M.M.2
Pyle, A.M.3
Ha, T.4
-
25
-
-
27644514163
-
Repetitive shuttling of a motor protein on DNA
-
Myong, S., Rasnik, I., Joo, C., Lohman, T.M. and Ha, T. (2005) Repetitive shuttling of a motor protein on DNA. Nature, 437, 1321-1325.
-
(2005)
Nature
, vol.437
, pp. 1321-1325
-
-
Myong, S.1
Rasnik, I.2
Joo, C.3
Lohman, T.M.4
Ha, T.5
-
26
-
-
22544452431
-
MRNA decay during herpes simplex virus (HSV) infections: Protein-protein interactions involving the HSV virion host shutoff protein and translation factors eif4h and eif4a
-
Feng, P., Everly, D.N. Jr and Read, G.S. (2005) mRNA decay during herpes simplex virus (HSV) infections: protein-protein interactions involving the HSV virion host shutoff protein and translation factors eIF4H and eIF4A. J. Virol., 79, 9651-9664.
-
(2005)
J. Virol.
, vol.79
, pp. 9651-9664
-
-
Feng, P.1
Everly Jr., D.N.2
Read, G.S.3
-
27
-
-
1542678766
-
High-throughput scanning confocal microscope for single molecule analysis
-
Sabanayagam, C.R., Eid, J.S. and Meller, A. (2004) High-throughput scanning confocal microscope for single molecule analysis. Appl. Phys. Lett., 84, 1216-1218.
-
(2004)
Appl. Phys. Lett.
, vol.84
, pp. 1216-1218
-
-
Sabanayagam, C.R.1
Eid, J.S.2
Meller, A.3
-
28
-
-
77956642214
-
The effect of dye-dye interactions on the spatial resolution of single-molecule FRET measurements in nucleic acids
-
Di Fiori, N. and Meller, A. (2010) The effect of dye-dye interactions on the spatial resolution of single-molecule FRET measurements in nucleic acids. Biophys. J., 98, 2265-2272.
-
(2010)
Biophys. J.
, vol.98
, pp. 2265-2272
-
-
Di Fiori, N.1
Meller, A.2
-
29
-
-
41449108157
-
An oxygen scavenging system for improvement of dye stability in singlemolecule fluorescence experiments
-
Aitken, C.E., Marshall, R.A. and Puglisi, J.D. (2008) An oxygen scavenging system for improvement of dye stability in singlemolecule fluorescence experiments. Biophys. J., 94, 1826-1835.
-
(2008)
Biophys. J.
, vol.94
, pp. 1826-1835
-
-
Aitken, C.E.1
Marshall, R.A.2
Puglisi, J.D.3
-
30
-
-
0035918241
-
Further characterization of the helicase activity of eif4a-substrate specificity
-
Rogers, G.W., Lima, W.F. and Merrick, W.C. (2001) Further characterization of the helicase activity of eIF4A-Substrate specificity. J. Biol. Chem., 276, 12598-12608.
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 12598-12608
-
-
Rogers, G.W.1
Lima, W.F.2
Merrick, W.C.3
-
31
-
-
18044373456
-
Short-range spectroscopic ruler based on a single-molecule optical switch
-
Bates, M., Blosser, T.R. and Zhuang, X.W. (2005) Short-range spectroscopic ruler based on a single-molecule optical switch. Phys. Rev. Lett., 94, 108101.
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 108101
-
-
Bates, M.1
Blosser, T.R.2
Zhuang, X.W.3
-
32
-
-
33750295496
-
Nonblinking and long-lasting single-molecule fluorescence imaging
-
Rasnik, I., McKinney, S.A. and Ha, T. (2006) Nonblinking and long-lasting single-molecule fluorescence imaging. Nat. Methods, 3, 891-893.
-
(2006)
Nat. Methods
, vol.3
, pp. 891-893
-
-
Rasnik, I.1
McKinney, S.A.2
Ha, T.3
-
33
-
-
52949097997
-
Interactions between eif4ai and its accessory factors eif4b and eif4h
-
Rozovsky, N., Butterworth, A.C. and Moore, M.J. (2008) Interactions between eIF4AI and its accessory factors eIF4B and eIF4H. RNA, 14, 2136-2148.
-
(2008)
RNA
, vol.14
, pp. 2136-2148
-
-
Rozovsky, N.1
Butterworth, A.C.2
Moore, M.J.3
-
34
-
-
80052965200
-
Duplex unwinding and ATPase activities of the DEAD-box helicase eIF4A are coupled by eIF4G and eIF4B
-
Ozes, A.R., Feoktistova, K., Avanzino, B.C. and Fraser, C.S. (2011) Duplex unwinding and ATPase activities of the DEAD-box helicase eIF4A are coupled by eIF4G and eIF4B. J. Mol. Biol., 412, 674-687.
-
(2011)
J. Mol. Biol.
, vol.412
, pp. 674-687
-
-
Ozes, A.R.1
Feoktistova, K.2
Avanzino, B.C.3
Fraser, C.S.4
-
35
-
-
0034700086
-
Crystal structure of yeast initiation factor 4A, a dead-box RNA helicase
-
Caruthers, J.M., Johnson, E.R. and McKay, D.B. (2000) Crystal structure of yeast initiation factor 4A, a DEAD-box RNA helicase. Proc. Natl Acad. Sci. USA, 97, 13080-13085.
-
(2000)
Proc. Natl Acad. Sci. USA
, vol.97
, pp. 13080-13085
-
-
Caruthers, J.M.1
Johnson, E.R.2
McKay, D.B.3
-
36
-
-
33746747438
-
Analysis of single-molecule FRET trajectories using hidden markov modeling
-
McKinney, S.A., Joo, C. and Ha, T. (2006) Analysis of single-molecule FRET trajectories using hidden Markov modeling. Biophys. J., 91, 1941-1951.
-
(2006)
Biophys. J.
, vol.91
, pp. 1941-1951
-
-
McKinney, S.A.1
Joo, C.2
Ha, T.3
-
37
-
-
58149503706
-
Dead-box proteins can completely separate an RNA duplex using a single ATP
-
Chen, Y., Potratz, J.P., Tijerina, P., Del Campo, M., Lambowitz, A.M. and Russell, R. (2008) DEAD-box proteins can completely separate an RNA duplex using a single ATP. Proc. Natl Acad. Sci. USA, 105, 20203-20208.
-
(2008)
Proc. Natl Acad. Sci. USA
, vol.105
, pp. 20203-20208
-
-
Chen, Y.1
Potratz, J.P.2
Tijerina, P.3
Del Campo, M.4
Lambowitz, A.M.5
Russell, R.6
-
38
-
-
79960724199
-
From unwinding to clamping - The DEAD box RNA helicase family
-
Linder, P. and Jankowsky, E. (2011) From unwinding to clamping-the DEAD box RNA helicase family. Nat. Rev. Mol. Cell Bio., 12, 505-516.
-
(2011)
Nat. Rev. Mol. Cell Bio.
, vol.12
, pp. 505-516
-
-
Linder, P.1
Jankowsky, E.2
-
39
-
-
77749239820
-
Pathway of ATP utilization and duplex rRNA unwinding by the DEAD-box helicase, DbpA
-
Henn, A., Cao, W., Licciardello, N., Heitkamp, S.E., Hackney, D.D. and De La Cruz, E.M. (2010) Pathway of ATP utilization and duplex rRNA unwinding by the DEAD-box helicase, DbpA. Proc. Natl Acad. Sci. USA, 107, 4046-4050.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 4046-4050
-
-
Henn, A.1
Cao, W.2
Licciardello, N.3
Heitkamp, S.E.4
Hackney, D.D.5
De La Cruz, E.M.6
-
40
-
-
45749139207
-
Small interfering RNAs that deplete the cellular translation factor eif4h impede mRNA degradation by the virion host shutoff protein of herpes simplex virus
-
Sarma, N., Agarwal, D., Shiflett, L.A. and Read, G.S. (2008) Small interfering RNAs that deplete the cellular translation factor eIF4H impede mRNA degradation by the virion host shutoff protein of herpes simplex virus. J. Virol., 82, 6600-6609.
-
(2008)
J. Virol.
, vol.82
, pp. 6600-6609
-
-
Sarma, N.1
Agarwal, D.2
Shiflett, L.A.3
Read, G.S.4
-
41
-
-
0032539693
-
A unified view of polymer dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
-
SantaLucia, J. Jr (1998) A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics. Proc. Natl Acad. Sci. USA, 95, 1460-1465.
-
(1998)
Proc. Natl Acad. Sci. USA
, vol.95
, pp. 1460-1465
-
-
SantaLucia Jr., J.1
-
42
-
-
0042121256
-
Mfold web server for nucleic acid folding and hybridization prediction
-
Zuker, M. (2003) Mfold web server for nucleic acid folding and hybridization prediction. Nucleic Acids Res., 31, 3406-3415.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 3406-3415
-
-
Zuker, M.1
|